RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
SMG6-210ENST00000572205 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
SMG6-210ENST00000572205 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
SMG6-210ENST00000572205 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
SMG6-210ENST00000572205 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
SMG6-210ENST00000572205 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
SMG6-210ENST00000572205 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
SMG6-210ENST00000572205 GPR162Q16538 588 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 COPS6Q7L5N1 327 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 FAM9BQ8IZU0 186 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 BRIP1Q9BX63 1249 aa11.3□□□□□ -0.6
SMG6-210ENST00000572205 NIP7Q9Y221 180 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMG6-210ENST00000572205 SRGNP10124 158 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 NBR1Q14596 966 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 NGEFQ8N5V2 710 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 SETDB2Q96T68 719 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
SMG6-210ENST00000572205 ZNF652Q9Y2D9 606 aa11.29□□□□□ -0.6
SMG6-210ENST00000572205 NFKBIEO00221 500 aa11.28□□□□□ -0.6
SMG6-210ENST00000572205 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
SMG6-210ENST00000572205 ISCA1Q9BUE6 129 aa11.28□□□□□ -0.6
SMG6-210ENST00000572205 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
SMG6-210ENST00000572205 CEP350Q5VT06 3117 aa11.28□□□□□ -0.6
SMG6-210ENST00000572205 ELL2O00472 640 aaPredicted RBP11.27□□□□□ -0.61
SMG6-210ENST00000572205 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 GPTP24298 496 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 YY1P25490 414 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 NLRP10Q86W26 655 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
SMG6-210ENST00000572205 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 C2CD5Q86YS7 1000 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
SMG6-210ENST00000572205 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
SMG6-210ENST00000572205 C7orf43Q8WVR3 580 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
SMG6-210ENST00000572205 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 PSME4Q14997 1843 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 VAMP4O75379 141 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
SMG6-210ENST00000572205 G2E3Q7L622 706 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 TRMT2AQ8IZ69 625 aaKnown RBP11.26□□□□□ -0.61
SMG6-210ENST00000572205 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 PLBD2Q8NHP8 589 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
SMG6-210ENST00000572205 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
SMG6-210ENST00000572205 DSG3P32926 999 aa11.25□□□□□ -0.61
SMG6-210ENST00000572205 RASSF7Q02833 373 aa11.25□□□□□ -0.61
SMG6-210ENST00000572205 EXOSC9Q06265 439 aaKnown RBP11.25□□□□□ -0.61
SMG6-210ENST00000572205 TCIRG1Q13488 830 aa11.25□□□□□ -0.61
SMG6-210ENST00000572205 DALRD3Q5D0E6 543 aaKnown RBP11.25□□□□□ -0.61
SMG6-210ENST00000572205 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
SMG6-210ENST00000572205 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
SMG6-210ENST00000572205 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
SMG6-210ENST00000572205 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
SMG6-210ENST00000572205 PDE6BP35913 854 aa11.24□□□□□ -0.61
SMG6-210ENST00000572205 ST5P78524 1137 aa11.24□□□□□ -0.61
SMG6-210ENST00000572205 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
SMG6-210ENST00000572205 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
SMG6-210ENST00000572205 SLC10A5Q5PT55 438 aa11.24□□□□□ -0.61
SMG6-210ENST00000572205 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
SMG6-210ENST00000572205 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
SMG6-210ENST00000572205 IGKV5-2P06315 115 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
SMG6-210ENST00000572205 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
SMG6-210ENST00000572205 DIEXFQ68CQ4 756 aaKnown RBP11.23□□□□□ -0.61
SMG6-210ENST00000572205 OLFM4Q6UX06 510 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 LTBP3Q9NS15 1303 aa11.23□□□□□ -0.61
SMG6-210ENST00000572205 H0YIN7 160 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 SCN9AQ15858 1988 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 CCDC30Q5VVM6 783 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
SMG6-210ENST00000572205 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 NYXQ9GZU5 481 aa11.22□□□□□ -0.61
SMG6-210ENST00000572205 ABCC4O15439 1325 aa11.21□□□□□ -0.61
SMG6-210ENST00000572205 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.61
SMG6-210ENST00000572205 NPR1P16066 1061 aa11.21□□□□□ -0.61
SMG6-210ENST00000572205 HSP90AB3PQ58FF7 597 aa11.21□□□□□ -0.61
SMG6-210ENST00000572205 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
SMG6-210ENST00000572205 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
SMG6-210ENST00000572205 CASP7P55210 303 aa11.2□□□□□ -0.62
SMG6-210ENST00000572205 FLIIQ13045 1269 aa11.2□□□□□ -0.62
SMG6-210ENST00000572205 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
SMG6-210ENST00000572205 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
SMG6-210ENST00000572205 SCN4AP35499 1836 aa11.19□□□□□ -0.62
SMG6-210ENST00000572205 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms