RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-209ENST00000571558 CLEC11AQ9Y240 323 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 IL16Q14005 1332 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 TPTE2Q6XPS3 522 aa17.84■□□□□ 0.45
RPAIN-209ENST00000571558 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
RPAIN-209ENST00000571558 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
RPAIN-209ENST00000571558 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
RPAIN-209ENST00000571558 FZD9O00144 591 aa17.83■□□□□ 0.45
RPAIN-209ENST00000571558 A1BGP04217 495 aa17.83■□□□□ 0.45
RPAIN-209ENST00000571558 ALDH1B1P30837 517 aa17.83■□□□□ 0.45
RPAIN-209ENST00000571558 GPC2Q8N158 579 aa17.83■□□□□ 0.45
RPAIN-209ENST00000571558 RTF1Q92541 710 aaKnown RBP17.83■□□□□ 0.45
RPAIN-209ENST00000571558 HSPA8P11142 646 aaKnown RBP17.82■□□□□ 0.44
RPAIN-209ENST00000571558 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
RPAIN-209ENST00000571558 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
RPAIN-209ENST00000571558 ADAMTSL1Q8N6G6 1762 aa17.82■□□□□ 0.44
RPAIN-209ENST00000571558 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
RPAIN-209ENST00000571558 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
RPAIN-209ENST00000571558 E9PSI1 815 aa17.81■□□□□ 0.44
RPAIN-209ENST00000571558 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
RPAIN-209ENST00000571558 ZNF277Q9NRM2 450 aaPredicted RBP17.81■□□□□ 0.44
RPAIN-209ENST00000571558 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
RPAIN-209ENST00000571558 ECE1P42892 770 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 GRIPAP1Q4V328 841 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 CC2D2BQ6DHV5 1058 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 PSMD1Q99460 953 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 BEGAINQ9BUH8 593 aa17.8■□□□□ 0.44
RPAIN-209ENST00000571558 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
RPAIN-209ENST00000571558 BTBD11A6QL63 1104 aa17.79■□□□□ 0.44
RPAIN-209ENST00000571558 RGS19P49795 217 aa17.79■□□□□ 0.44
RPAIN-209ENST00000571558 MAP1SQ66K74 1059 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-209ENST00000571558 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
RPAIN-209ENST00000571558 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
RPAIN-209ENST00000571558 ABT1Q9ULW3 272 aaKnown RBP17.79■□□□□ 0.44
RPAIN-209ENST00000571558 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
RPAIN-209ENST00000571558 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
RPAIN-209ENST00000571558 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
RPAIN-209ENST00000571558 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
RPAIN-209ENST00000571558 USP16Q9Y5T5 823 aa17.78■□□□□ 0.44
RPAIN-209ENST00000571558 SIPA1L3O60292 1781 aaPredicted RBP17.78■□□□□ 0.44
RPAIN-209ENST00000571558 CHL1O00533 1208 aa17.77■□□□□ 0.44
RPAIN-209ENST00000571558 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
RPAIN-209ENST00000571558 GNAI1P63096 354 aa17.77■□□□□ 0.44
RPAIN-209ENST00000571558 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
RPAIN-209ENST00000571558 LMOD1P29536 600 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-209ENST00000571558 MLLT1Q03111 559 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-209ENST00000571558 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
RPAIN-209ENST00000571558 NIP7Q9Y221 180 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPAIN-209ENST00000571558 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
RPAIN-209ENST00000571558 FANCIQ9NVI1 1328 aa17.75■□□□□ 0.43
RPAIN-209ENST00000571558 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
RPAIN-209ENST00000571558 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
RPAIN-209ENST00000571558 MAP2K2P36507 400 aa17.74■□□□□ 0.43
RPAIN-209ENST00000571558 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-209ENST00000571558 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
RPAIN-209ENST00000571558 CAPNS2Q96L46 248 aa17.74■□□□□ 0.43
RPAIN-209ENST00000571558 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
RPAIN-209ENST00000571558 CA12O43570 354 aa17.73■□□□□ 0.43
RPAIN-209ENST00000571558 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-209ENST00000571558 CRY2Q49AN0 593 aa17.73■□□□□ 0.43
RPAIN-209ENST00000571558 USP50Q70EL3 339 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-209ENST00000571558 GPR101Q96P66 508 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-209ENST00000571558 THSD7BQ9C0I4 1608 aa17.73■□□□□ 0.43
RPAIN-209ENST00000571558 KCNQ3O43525 872 aa17.72■□□□□ 0.43
RPAIN-209ENST00000571558 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
RPAIN-209ENST00000571558 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
RPAIN-209ENST00000571558 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
RPAIN-209ENST00000571558 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
RPAIN-209ENST00000571558 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
RPAIN-209ENST00000571558 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
RPAIN-209ENST00000571558 HOXA10P31260 410 aaPredicted RBP17.71■□□□□ 0.43
RPAIN-209ENST00000571558 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 CCDC85CA6NKD9 419 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 SCNN1DP51172 638 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 HHIPL1Q96JK4 782 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 TSPYL4Q9UJ04 414 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 TLL2Q9Y6L7 1015 aa17.7■□□□□ 0.42
RPAIN-209ENST00000571558 NBPF26B4DH59 902 aa17.69■□□□□ 0.42
RPAIN-209ENST00000571558 ERVV-1B6SEH8 477 aa17.69■□□□□ 0.42
RPAIN-209ENST00000571558 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-209ENST00000571558 NBPF10Q6P3W6 841 aaKnown RBP17.69■□□□□ 0.42
RPAIN-209ENST00000571558 NBPF15Q8N660 670 aa17.69■□□□□ 0.42
RPAIN-209ENST00000571558 RIC1Q4ADV7 1423 aa17.68■□□□□ 0.42
RPAIN-209ENST00000571558 CST9Q5W186 159 aa17.68■□□□□ 0.42
RPAIN-209ENST00000571558 CYP4F22Q6NT55 531 aa17.68■□□□□ 0.42
RPAIN-209ENST00000571558 PAXIP1Q6ZW49 1069 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-209ENST00000571558 LARGE2Q8N3Y3 721 aa17.68■□□□□ 0.42
RPAIN-209ENST00000571558 PRAMEF22A3QJZ6 481 aa17.67■□□□□ 0.42
RPAIN-209ENST00000571558 EPS15P42566 896 aa17.67■□□□□ 0.42
RPAIN-209ENST00000571558 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
RPAIN-209ENST00000571558 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
RPAIN-209ENST00000571558 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
RPAIN-209ENST00000571558 FAM177BA6PVY3 158 aa17.66■□□□□ 0.42
RPAIN-209ENST00000571558 HLFQ16534 295 aa17.66■□□□□ 0.42
RPAIN-209ENST00000571558 CRAMP1Q96RY5 1269 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms