RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 KRT85P78386 507 aa20.8■□□□□ 0.92
SCARF1-205ENST00000571272 ZNF710Q8N1W2 664 aa20.8■□□□□ 0.92
SCARF1-205ENST00000571272 EAF2Q96CJ1 260 aaPredicted RBP20.8■□□□□ 0.92
SCARF1-205ENST00000571272 TAF6LQ9Y6J9 622 aa20.8■□□□□ 0.92
SCARF1-205ENST00000571272 CKAP2LQ8IYA6 745 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 SIL1Q9H173 461 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 IP6K1Q92551 441 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 TLR7Q9NYK1 1049 aaKnown RBP20.79■□□□□ 0.92
SCARF1-205ENST00000571272 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
SCARF1-205ENST00000571272 SLC27A2O14975 620 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 SASH1O94885 1247 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 STK3Q13188 491 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 KIAA1524Q8TCG1 905 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 MAP4K1Q92918 833 aa20.79■□□□□ 0.92
SCARF1-205ENST00000571272 A0A0D9SFI3 127 aa20.78■□□□□ 0.92
SCARF1-205ENST00000571272 AIMP1Q12904 312 aaKnown RBP20.78■□□□□ 0.92
SCARF1-205ENST00000571272 LUZP1Q86V48 1076 aa20.78■□□□□ 0.92
SCARF1-205ENST00000571272 RBM33Q96EV2 1170 aaKnown RBP20.78■□□□□ 0.92
SCARF1-205ENST00000571272 NUP62CLQ9H1M0 184 aa20.78■□□□□ 0.92
SCARF1-205ENST00000571272 PRDM10Q9NQV6 1147 aa20.78■□□□□ 0.92
SCARF1-205ENST00000571272 MAP3K11Q16584 847 aa20.77■□□□□ 0.92
SCARF1-205ENST00000571272 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
SCARF1-205ENST00000571272 SUCLG2Q96I99 432 aa20.77■□□□□ 0.92
SCARF1-205ENST00000571272 KIF3AQ9Y496 699 aa20.77■□□□□ 0.92
SCARF1-205ENST00000571272 G3BP1Q13283 466 aaKnown RBP eCLIP20.77■□□□□ 0.92
SCARF1-205ENST00000571272 FSD1Q9BTV5 496 aa20.77■□□□□ 0.92
SCARF1-205ENST00000571272 CHMP4AQ9BY43 222 aa20.77■□□□□ 0.92
SCARF1-205ENST00000571272 CRYBG1Q9Y4K1 1723 aa20.77■□□□□ 0.91
SCARF1-205ENST00000571272 BLOC1S2Q6QNY1 142 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 KLHDC4Q8TBB5 520 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 BICC1Q9H694 974 aaKnown RBP20.76■□□□□ 0.91
SCARF1-205ENST00000571272 ALDH1L1O75891 902 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 PSMA5P28066 241 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 TYRO3Q06418 890 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 FAM200AQ8TCP9 573 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 CCDC94Q9BW85 323 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-205ENST00000571272 DACT1Q9NYF0 836 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 MRVI1Q9Y6F6 885 aa20.76■□□□□ 0.91
SCARF1-205ENST00000571272 GOLGA6L4A6NEF3 574 aa20.75■□□□□ 0.91
SCARF1-205ENST00000571272 KAZALD1Q96I82 304 aa20.75■□□□□ 0.91
SCARF1-205ENST00000571272 GTF2F1P35269 517 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■■■■■ 35.7
SCARF1-205ENST00000571272 AKAP4Q5JQC9 854 aa20.75■□□□□ 0.91
SCARF1-205ENST00000571272 LARP1Q6PKG0 1096 aaKnown RBP20.75■□□□□ 0.91
SCARF1-205ENST00000571272 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
SCARF1-205ENST00000571272 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-205ENST00000571272 PTGS1P23219 599 aa20.75■□□□□ 0.91
SCARF1-205ENST00000571272 TNMDQ9H2S6 317 aa20.74■□□□□ 0.91
SCARF1-205ENST00000571272 GRM8O00222 908 aa20.74■□□□□ 0.91
SCARF1-205ENST00000571272 EDC3Q96F86 508 aaKnown RBP20.74■□□□□ 0.91
SCARF1-205ENST00000571272 GOLGA6L6A8MZA4 724 aa20.73■□□□□ 0.91
SCARF1-205ENST00000571272 PDCP20941 246 aa20.73■□□□□ 0.91
SCARF1-205ENST00000571272 ZNF589Q86UQ0 364 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-205ENST00000571272 SPATA32Q96LK8 384 aa20.73■□□□□ 0.91
SCARF1-205ENST00000571272 BCL2L12Q9HB09 334 aa20.73■□□□□ 0.91
SCARF1-205ENST00000571272 PHF8Q9UPP1 1060 aa20.73■□□□□ 0.91
SCARF1-205ENST00000571272 RNMTO43148 476 aaKnown RBP20.73■□□□□ 0.91
SCARF1-205ENST00000571272 ANO6Q4KMQ2 910 aa20.73■□□□□ 0.91
SCARF1-205ENST00000571272 PLEKHO1Q53GL0 409 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-205ENST00000571272 HIP1O00291 1037 aa20.72■□□□□ 0.91
SCARF1-205ENST00000571272 TOB2Q14106 344 aaPredicted RBP20.72■□□□□ 0.91
SCARF1-205ENST00000571272 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
SCARF1-205ENST00000571272 C1orf141Q5JVX7 400 aa20.72■□□□□ 0.91
SCARF1-205ENST00000571272 RNF20Q5VTR2 975 aa20.72■□□□□ 0.91
SCARF1-205ENST00000571272 RIOK3O14730 519 aaKnown RBP20.71■□□□□ 0.91
SCARF1-205ENST00000571272 DRC7Q8IY82 874 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 ANKARQ7Z5J8 1434 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 TPM3P06753 285 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 CBX8Q9HC52 389 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 CHAF1AQ13111 956 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-205ENST00000571272 CCDC186Q7Z3E2 898 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 LINS1Q8NG48 757 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 PRDM4Q9UKN5 801 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 ELP1O95163 1332 aa20.71■□□□□ 0.91
SCARF1-205ENST00000571272 MED1Q15648 1581 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-205ENST00000571272 LRMPQ12912 555 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 ANKRD1Q15327 319 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 LEO1Q8WVC0 666 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-205ENST00000571272 SCAND2PQ9GZW5 306 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-205ENST00000571272 NRBP1Q9UHY1 535 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 HDAC5Q9UQL6 1122 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 JAK2O60674 1132 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 NDUFB9Q9Y6M9 179 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
SCARF1-205ENST00000571272 NPHP4O75161 1426 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-205ENST00000571272 CBX1P83916 185 aa20.69■□□□□ 0.9
SCARF1-205ENST00000571272 DDX11Q96FC9 970 aa20.69■□□□□ 0.9
SCARF1-205ENST00000571272 LTN1O94822 1766 aa20.69■□□□□ 0.9
SCARF1-205ENST00000571272 NR1I2O75469 434 aa20.69■□□□□ 0.9
SCARF1-205ENST00000571272 PPP4R3BQ5MIZ7 849 aa20.69■□□□□ 0.9
SCARF1-205ENST00000571272 THEMISQ8N1K5 641 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-205ENST00000571272 BICD2Q8TD16 824 aa20.69■□□□□ 0.9
SCARF1-205ENST00000571272 SMAP1Q8IYB5 467 aaPredicted RBP20.68■□□□□ 0.9
SCARF1-205ENST00000571272 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
SCARF1-205ENST00000571272 TRIM5Q9C035 493 aa20.68■□□□□ 0.9
SCARF1-205ENST00000571272 CHGBP05060 677 aa20.68■□□□□ 0.9
SCARF1-205ENST00000571272 PSME1Q06323 249 aa20.68■□□□□ 0.9
SCARF1-205ENST00000571272 NPHP3Q7Z494 1330 aa20.68■□□□□ 0.9
SCARF1-205ENST00000571272 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms