RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 USPL1Q5W0Q7 1092 aa14.89□□□□□ -0.03
CDRT1-206ENST00000571263 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
CDRT1-206ENST00000571263 SETDB2Q96T68 719 aa14.89□□□□□ -0.03
CDRT1-206ENST00000571263 NYXQ9GZU5 481 aa14.89□□□□□ -0.03
CDRT1-206ENST00000571263 NIP7Q9Y221 180 aaKnown RBP eCLIP14.89□□□□□ -0.03
CDRT1-206ENST00000571263 NUP98P52948 1817 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 PHF14O94880 888 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 MTX1Q13505 466 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 SLC15A2Q16348 729 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 CEP85Q6P2H3 762 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 UTP14AQ9BVJ6 771 aaKnown RBP14.88□□□□□ -0.03
CDRT1-206ENST00000571263 PLA2G12BQ9BX93 195 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 TRMT112Q9UI30 125 aaKnown RBP14.88□□□□□ -0.03
CDRT1-206ENST00000571263 LRRFIP2Q9Y608 721 aaKnown RBP14.88□□□□□ -0.03
CDRT1-206ENST00000571263 ANKRD36CQ5JPF3 1778 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 BCORQ6W2J9 1755 aa14.88□□□□□ -0.03
CDRT1-206ENST00000571263 UBR3Q6ZT12 1888 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 GPTP24298 496 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 CASP7P55210 303 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 UBE3BQ7Z3V4 1068 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
CDRT1-206ENST00000571263 SCN7AQ01118 1682 aa14.87□□□□□ -0.03
CDRT1-206ENST00000571263 TPTE2Q6XPS3 522 aa14.86□□□□□ -0.03
CDRT1-206ENST00000571263 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
CDRT1-206ENST00000571263 BCL2L12Q9HB09 334 aa14.86□□□□□ -0.03
CDRT1-206ENST00000571263 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
CDRT1-206ENST00000571263 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
CDRT1-206ENST00000571263 HSP90AB4PQ58FF6 505 aa14.85□□□□□ -0.03
CDRT1-206ENST00000571263 DEFB132Q7Z7B7 95 aa14.85□□□□□ -0.03
CDRT1-206ENST00000571263 SSH3Q8TE77 659 aa14.85□□□□□ -0.03
CDRT1-206ENST00000571263 SUCLG2Q96I99 432 aa14.85□□□□□ -0.03
CDRT1-206ENST00000571263 KDM2BQ8NHM5 1336 aa14.85□□□□□ -0.03
CDRT1-206ENST00000571263 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 PDE8AO60658 829 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 IGHDP01880 384 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 GYS1P13807 737 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 GTF2E1P29083 439 aaPredicted RBP14.84□□□□□ -0.03
CDRT1-206ENST00000571263 SLC10A5Q5PT55 438 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 SUSD4Q5VX71 490 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 TBC1D9BQ66K14 1250 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDRT1-206ENST00000571263 DCTPP1Q9H773 170 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 SRP68Q9UHB9 627 aaKnown RBP14.84□□□□□ -0.03
CDRT1-206ENST00000571263 CARMIL3Q8ND23 1372 aa14.84□□□□□ -0.03
CDRT1-206ENST00000571263 POLA2Q14181 598 aa14.83□□□□□ -0.04
CDRT1-206ENST00000571263 COL23A1Q86Y22 540 aaPredicted RBP14.83□□□□□ -0.04
CDRT1-206ENST00000571263 SIRT2Q8IXJ6 389 aa14.83□□□□□ -0.04
CDRT1-206ENST00000571263 SLC16A10Q8TF71 515 aa14.83□□□□□ -0.04
CDRT1-206ENST00000571263 FAM89AQ96GI7 184 aa14.83□□□□□ -0.04
CDRT1-206ENST00000571263 BICC1Q9H694 974 aaKnown RBP14.83□□□□□ -0.04
CDRT1-206ENST00000571263 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
CDRT1-206ENST00000571263 UBN2Q6ZU65 1347 aa14.83□□□□□ -0.04
CDRT1-206ENST00000571263 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
CDRT1-206ENST00000571263 MSH5O43196 834 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 RAB11FIP3O75154 756 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 NTSR2O95665 410 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 TM4SF1P30408 202 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 FOXO4P98177 505 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 AMIGO3Q86WK7 504 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 NBPF5PQ86XG9 351 aaPredicted RBP14.82□□□□□ -0.04
CDRT1-206ENST00000571263 KAZALD1Q96I82 304 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 C4AP0C0L4 1744 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 QSER1Q2KHR3 1735 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 PNPLA7Q6ZV29 1317 aa14.82□□□□□ -0.04
CDRT1-206ENST00000571263 CSF1RP07333 972 aa14.81□□□□□ -0.04
CDRT1-206ENST00000571263 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
CDRT1-206ENST00000571263 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
CDRT1-206ENST00000571263 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
CDRT1-206ENST00000571263 NFIXQ14938 502 aa14.8□□□□□ -0.04
CDRT1-206ENST00000571263 LMBR1LQ6UX01 489 aa14.8□□□□□ -0.04
CDRT1-206ENST00000571263 BICDL1Q6ZP65 573 aa14.8□□□□□ -0.04
CDRT1-206ENST00000571263 ERC1Q8IUD2 1116 aa14.8□□□□□ -0.04
CDRT1-206ENST00000571263 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
CDRT1-206ENST00000571263 NPHP1O15259 732 aa14.79□□□□□ -0.04
CDRT1-206ENST00000571263 ST5P78524 1137 aa14.79□□□□□ -0.04
CDRT1-206ENST00000571263 CCDC57Q2TAC2 916 aa14.79□□□□□ -0.04
CDRT1-206ENST00000571263 RTL5Q5HYW3 569 aaPredicted RBP14.79□□□□□ -0.04
CDRT1-206ENST00000571263 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
CDRT1-206ENST00000571263 NLRP3Q96P20 1036 aa14.79□□□□□ -0.04
CDRT1-206ENST00000571263 COPRSQ9NQ92 184 aa14.79□□□□□ -0.04
CDRT1-206ENST00000571263 SURF6O75683 361 aaKnown RBP14.78□□□□□ -0.04
CDRT1-206ENST00000571263 CTSWP56202 376 aa14.78□□□□□ -0.04
CDRT1-206ENST00000571263 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDRT1-206ENST00000571263 IFIT5Q13325 482 aaKnown RBP14.78□□□□□ -0.04
CDRT1-206ENST00000571263 CCDC152Q4G0S7 254 aa14.78□□□□□ -0.04
CDRT1-206ENST00000571263 CNBD1Q8NA66 436 aa14.78□□□□□ -0.04
CDRT1-206ENST00000571263 TTLL11Q8NHH1 800 aa14.78□□□□□ -0.04
CDRT1-206ENST00000571263 JARID2Q92833 1246 aaPredicted RBP14.78□□□□□ -0.04
CDRT1-206ENST00000571263 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
CDRT1-206ENST00000571263 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
CDRT1-206ENST00000571263 RIC1Q4ADV7 1423 aa14.77□□□□□ -0.04
CDRT1-206ENST00000571263 RTL9Q8NET4 1388 aa14.77□□□□□ -0.04
CDRT1-206ENST00000571263 ANKRD18BA2A2Z9 1011 aa14.77□□□□□ -0.05
CDRT1-206ENST00000571263 FAM177BA6PVY3 158 aa14.77□□□□□ -0.05
CDRT1-206ENST00000571263 SERPINB2P05120 415 aa14.77□□□□□ -0.05
CDRT1-206ENST00000571263 NUCB1Q02818 461 aa14.77□□□□□ -0.05
CDRT1-206ENST00000571263 SF3B3Q15393 1217 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms