RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CCDC93Q567U6 631 aa22.35■■□□□ 1.17
RPA1-203ENST00000571058 PLBD2Q8NHP8 589 aa22.35■■□□□ 1.17
RPA1-203ENST00000571058 C7orf43Q8WVR3 580 aa22.35■■□□□ 1.17
RPA1-203ENST00000571058 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
RPA1-203ENST00000571058 TNRC6CQ9HCJ0 1690 aaKnown RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 DICER1Q9UPY3 1922 aaKnown RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 HOXA10P31260 410 aaPredicted RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
RPA1-203ENST00000571058 RPGRQ92834 1020 aaKnown RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 IL16Q14005 1332 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 SLC10A5Q5PT55 438 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 WWC1Q8IX03 1113 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 NLRP3Q96P20 1036 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 TIAM2Q8IVF5 1701 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 SENP3-EIF4A1A0A087X0R7 540 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 TOMM70O94826 608 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 PRELPP51888 382 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 GRIPAP1Q4V328 841 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 NLRP10Q86W26 655 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 NMRK2Q9NPI5 230 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 GLTPD2A6NH11 291 aa22.31■■□□□ 1.16
RPA1-203ENST00000571058 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
RPA1-203ENST00000571058 CRAMP1Q96RY5 1269 aa22.31■■□□□ 1.16
RPA1-203ENST00000571058 CCDC30Q5VVM6 783 aa22.3■■□□□ 1.16
RPA1-203ENST00000571058 DPY19L2Q6NUT2 758 aa22.3■■□□□ 1.16
RPA1-203ENST00000571058 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
RPA1-203ENST00000571058 C16orf71Q8IYS4 520 aaPredicted RBP22.29■■□□□ 1.16
RPA1-203ENST00000571058 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
RPA1-203ENST00000571058 TRMT112Q9UI30 125 aaKnown RBP22.29■■□□□ 1.16
RPA1-203ENST00000571058 SH3TC1Q8TE82 1336 aa22.29■■□□□ 1.16
RPA1-203ENST00000571058 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
RPA1-203ENST00000571058 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
RPA1-203ENST00000571058 RBM46Q8TBY0 533 aaKnown RBP22.27■■□□□ 1.16
RPA1-203ENST00000571058 TRIM28Q13263 835 aaKnown RBP22.26■■□□□ 1.15
RPA1-203ENST00000571058 WDR63Q8IWG1 891 aa22.26■■□□□ 1.15
RPA1-203ENST00000571058 PSMD1Q99460 953 aa22.26■■□□□ 1.15
RPA1-203ENST00000571058 ISCA1Q9BUE6 129 aa22.26■■□□□ 1.15
RPA1-203ENST00000571058 DDX58O95786 925 aaKnown RBP22.25■■□□□ 1.15
RPA1-203ENST00000571058 VEGFAP15692 232 aaPredicted RBP22.25■■□□□ 1.15
RPA1-203ENST00000571058 HSPA6P17066 643 aa22.25■■□□□ 1.15
RPA1-203ENST00000571058 RIC3Q7Z5B4 369 aa22.25■■□□□ 1.15
RPA1-203ENST00000571058 TMX4Q9H1E5 349 aaPredicted RBP22.25■■□□□ 1.15
RPA1-203ENST00000571058 RRAGCQ9HB90 399 aa22.25■■□□□ 1.15
RPA1-203ENST00000571058 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
RPA1-203ENST00000571058 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
RPA1-203ENST00000571058 PPEF1O14829 653 aaPredicted RBP22.22■■□□□ 1.15
RPA1-203ENST00000571058 HSP90B1P14625 803 aaKnown RBP22.22■■□□□ 1.15
RPA1-203ENST00000571058 FSTL1Q12841 308 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 C3orf67Q6ZVT6 689 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 TSPYL6Q8N831 410 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 PHAXQ9H814 394 aaKnown RBP22.22■■□□□ 1.15
RPA1-203ENST00000571058 WDR90Q96KV7 1748 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 SNED1Q8TER0 1413 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 LAMB2P55268 1798 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 BBOX1O75936 387 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
RPA1-203ENST00000571058 TWISTNBQ3B726 338 aaPredicted RBP22.21■■□□□ 1.15
RPA1-203ENST00000571058 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 ATP5J2-PTCD1G3V325 749 aa22.2■■□□□ 1.14
RPA1-203ENST00000571058 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
RPA1-203ENST00000571058 DDX46Q7L014 1031 aaKnown RBP22.2■■□□□ 1.14
RPA1-203ENST00000571058 SYNE4Q8N205 404 aa22.2■■□□□ 1.14
RPA1-203ENST00000571058 ZNF277Q9NRM2 450 aaPredicted RBP22.2■■□□□ 1.14
RPA1-203ENST00000571058 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
RPA1-203ENST00000571058 TMC4Q7Z404 712 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 CCDC191Q8NCU4 936 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 ABCC4O15439 1325 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 CACNA1FO60840 1977 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 FANCIQ9NVI1 1328 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 SMC1BQ8NDV3 1235 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 JDP2Q8WYK2 163 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 FAM89AQ96GI7 184 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 VPS33BQ9H267 617 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 APLP1P51693 650 aa22.17■■□□□ 1.14
RPA1-203ENST00000571058 SF3B3Q15393 1217 aaKnown RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 ZBTB38Q8NAP3 1195 aaPredicted RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 METTL22Q9BUU2 404 aaPredicted RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 IQCA1LA6NCM1 817 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 GRAPQ13588 217 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 KSR2Q6VAB6 950 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 SP8Q8IXZ3 490 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 GRAPLQ8TC17 118 aaPredicted RBP22.16■■□□□ 1.14
RPA1-203ENST00000571058 MYD88Q99836 296 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 MYH16Q9H6N6 1097 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
RPA1-203ENST00000571058 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
RPA1-203ENST00000571058 SUPT20HQ8NEM7 779 aa22.15■■□□□ 1.14
RPA1-203ENST00000571058 L3MBTL3Q96JM7 780 aaPredicted RBP22.15■■□□□ 1.14
RPA1-203ENST00000571058 CWC25Q9NXE8 425 aaPredicted RBP22.15■■□□□ 1.14
RPA1-203ENST00000571058 FZD9O00144 591 aa22.14■■□□□ 1.13
RPA1-203ENST00000571058 DDNO94850 711 aaPredicted RBP22.14■■□□□ 1.13
RPA1-203ENST00000571058 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.13
RPA1-203ENST00000571058 MAP3K2Q9Y2U5 619 aa22.14■■□□□ 1.13
RPA1-203ENST00000571058 SCN4AP35499 1836 aa22.13■■□□□ 1.13
RPA1-203ENST00000571058 POTECB2RU33 542 aa22.13■■□□□ 1.13
RPA1-203ENST00000571058 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms