RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CCDC93Q567U6 631 aa22.35■■□□□ 1.17
RPA1-203ENST00000571058 PLBD2Q8NHP8 589 aa22.35■■□□□ 1.17
RPA1-203ENST00000571058 C7orf43Q8WVR3 580 aa22.35■■□□□ 1.17
RPA1-203ENST00000571058 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
RPA1-203ENST00000571058 TNRC6CQ9HCJ0 1690 aaKnown RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 DICER1Q9UPY3 1922 aaKnown RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 HOXA10P31260 410 aaPredicted RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
RPA1-203ENST00000571058 RPGRQ92834 1020 aaKnown RBP22.34■■□□□ 1.17
RPA1-203ENST00000571058 IL16Q14005 1332 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 SLC10A5Q5PT55 438 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 WWC1Q8IX03 1113 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 NLRP3Q96P20 1036 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 TIAM2Q8IVF5 1701 aa22.33■■□□□ 1.17
RPA1-203ENST00000571058 SENP3-EIF4A1A0A087X0R7 540 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 TOMM70O94826 608 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 PRELPP51888 382 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 GRIPAP1Q4V328 841 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 NLRP10Q86W26 655 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 NMRK2Q9NPI5 230 aa22.32■■□□□ 1.16
RPA1-203ENST00000571058 GLTPD2A6NH11 291 aa22.31■■□□□ 1.16
RPA1-203ENST00000571058 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
RPA1-203ENST00000571058 CRAMP1Q96RY5 1269 aa22.31■■□□□ 1.16
RPA1-203ENST00000571058 CCDC30Q5VVM6 783 aa22.3■■□□□ 1.16
RPA1-203ENST00000571058 DPY19L2Q6NUT2 758 aa22.3■■□□□ 1.16
RPA1-203ENST00000571058 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
RPA1-203ENST00000571058 C16orf71Q8IYS4 520 aaPredicted RBP22.29■■□□□ 1.16
RPA1-203ENST00000571058 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
RPA1-203ENST00000571058 TRMT112Q9UI30 125 aaKnown RBP22.29■■□□□ 1.16
RPA1-203ENST00000571058 SH3TC1Q8TE82 1336 aa22.29■■□□□ 1.16
RPA1-203ENST00000571058 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
RPA1-203ENST00000571058 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
RPA1-203ENST00000571058 RBM46Q8TBY0 533 aaKnown RBP22.27■■□□□ 1.16
RPA1-203ENST00000571058 TRIM28Q13263 835 aaKnown RBP22.26■■□□□ 1.15
RPA1-203ENST00000571058 WDR63Q8IWG1 891 aa22.26■■□□□ 1.15
RPA1-203ENST00000571058 PSMD1Q99460 953 aa22.26■■□□□ 1.15
RPA1-203ENST00000571058 ISCA1Q9BUE6 129 aa22.26■■□□□ 1.15
RPA1-203ENST00000571058 DDX58O95786 925 aaKnown RBP22.25■■□□□ 1.15
RPA1-203ENST00000571058 VEGFAP15692 232 aaPredicted RBP22.25■■□□□ 1.15
RPA1-203ENST00000571058 HSPA6P17066 643 aa22.25■■□□□ 1.15
RPA1-203ENST00000571058 RIC3Q7Z5B4 369 aa22.25■■□□□ 1.15
RPA1-203ENST00000571058 TMX4Q9H1E5 349 aaPredicted RBP22.25■■□□□ 1.15
RPA1-203ENST00000571058 RRAGCQ9HB90 399 aa22.25■■□□□ 1.15
RPA1-203ENST00000571058 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
RPA1-203ENST00000571058 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
RPA1-203ENST00000571058 PPEF1O14829 653 aaPredicted RBP22.22■■□□□ 1.15
RPA1-203ENST00000571058 HSP90B1P14625 803 aaKnown RBP22.22■■□□□ 1.15
RPA1-203ENST00000571058 FSTL1Q12841 308 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 C3orf67Q6ZVT6 689 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 TSPYL6Q8N831 410 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 PHAXQ9H814 394 aaKnown RBP22.22■■□□□ 1.15
RPA1-203ENST00000571058 WDR90Q96KV7 1748 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 SNED1Q8TER0 1413 aa22.22■■□□□ 1.15
RPA1-203ENST00000571058 LAMB2P55268 1798 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 BBOX1O75936 387 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
RPA1-203ENST00000571058 TWISTNBQ3B726 338 aaPredicted RBP22.21■■□□□ 1.15
RPA1-203ENST00000571058 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
RPA1-203ENST00000571058 ATP5J2-PTCD1G3V325 749 aa22.2■■□□□ 1.14
RPA1-203ENST00000571058 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
RPA1-203ENST00000571058 DDX46Q7L014 1031 aaKnown RBP22.2■■□□□ 1.14
RPA1-203ENST00000571058 SYNE4Q8N205 404 aa22.2■■□□□ 1.14
RPA1-203ENST00000571058 ZNF277Q9NRM2 450 aaPredicted RBP22.2■■□□□ 1.14
RPA1-203ENST00000571058 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
RPA1-203ENST00000571058 TMC4Q7Z404 712 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 CCDC191Q8NCU4 936 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 ABCC4O15439 1325 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 CACNA1FO60840 1977 aa22.19■■□□□ 1.14
RPA1-203ENST00000571058 FANCIQ9NVI1 1328 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 SMC1BQ8NDV3 1235 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 JDP2Q8WYK2 163 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 FAM89AQ96GI7 184 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 VPS33BQ9H267 617 aa22.18■■□□□ 1.14
RPA1-203ENST00000571058 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 APLP1P51693 650 aa22.17■■□□□ 1.14
RPA1-203ENST00000571058 SF3B3Q15393 1217 aaKnown RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 ZBTB38Q8NAP3 1195 aaPredicted RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 METTL22Q9BUU2 404 aaPredicted RBP22.17■■□□□ 1.14
RPA1-203ENST00000571058 IQCA1LA6NCM1 817 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 GRAPQ13588 217 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 KSR2Q6VAB6 950 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 SP8Q8IXZ3 490 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 GRAPLQ8TC17 118 aaPredicted RBP22.16■■□□□ 1.14
RPA1-203ENST00000571058 MYD88Q99836 296 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 MYH16Q9H6N6 1097 aa22.16■■□□□ 1.14
RPA1-203ENST00000571058 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
RPA1-203ENST00000571058 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
RPA1-203ENST00000571058 SUPT20HQ8NEM7 779 aa22.15■■□□□ 1.14
RPA1-203ENST00000571058 L3MBTL3Q96JM7 780 aaPredicted RBP22.15■■□□□ 1.14
RPA1-203ENST00000571058 CWC25Q9NXE8 425 aaPredicted RBP22.15■■□□□ 1.14
RPA1-203ENST00000571058 FZD9O00144 591 aa22.14■■□□□ 1.13
RPA1-203ENST00000571058 DDNO94850 711 aaPredicted RBP22.14■■□□□ 1.13
RPA1-203ENST00000571058 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.13
RPA1-203ENST00000571058 MAP3K2Q9Y2U5 619 aa22.14■■□□□ 1.13
RPA1-203ENST00000571058 SCN4AP35499 1836 aa22.13■■□□□ 1.13
RPA1-203ENST00000571058 POTECB2RU33 542 aa22.13■■□□□ 1.13
RPA1-203ENST00000571058 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms