RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 TIAM2Q8IVF5 1701 aa17.3■□□□□ 0.36
RPAIN-207ENST00000570883 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
RPAIN-207ENST00000570883 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-207ENST00000570883 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
RPAIN-207ENST00000570883 HSP90AB3PQ58FF7 597 aa17.3■□□□□ 0.36
RPAIN-207ENST00000570883 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
RPAIN-207ENST00000570883 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
RPAIN-207ENST00000570883 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
RPAIN-207ENST00000570883 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
RPAIN-207ENST00000570883 NPR1P16066 1061 aa17.28■□□□□ 0.36
RPAIN-207ENST00000570883 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
RPAIN-207ENST00000570883 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
RPAIN-207ENST00000570883 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
RPAIN-207ENST00000570883 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
RPAIN-207ENST00000570883 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
RPAIN-207ENST00000570883 UTP14AQ9BVJ6 771 aaKnown RBP17.28■□□□□ 0.36
RPAIN-207ENST00000570883 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 VAMP4O75379 141 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 RASSF7Q02833 373 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
RPAIN-207ENST00000570883 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 MYH3P11055 1940 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 NFKBIEO00221 500 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 C21orf2O43822 256 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 PRELPP51888 382 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 G2E3Q7L622 706 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 RIC3Q7Z5B4 369 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
RPAIN-207ENST00000570883 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-207ENST00000570883 SLC10A5Q5PT55 438 aa17.25■□□□□ 0.35
RPAIN-207ENST00000570883 C7orf43Q8WVR3 580 aa17.25■□□□□ 0.35
RPAIN-207ENST00000570883 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
RPAIN-207ENST00000570883 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
RPAIN-207ENST00000570883 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
RPAIN-207ENST00000570883 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
RPAIN-207ENST00000570883 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
RPAIN-207ENST00000570883 COL4A1P02462 1669 aa17.23■□□□□ 0.35
RPAIN-207ENST00000570883 SNED1Q8TER0 1413 aa17.23■□□□□ 0.35
RPAIN-207ENST00000570883 HCLS1P14317 486 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-207ENST00000570883 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-207ENST00000570883 OLFM4Q6UX06 510 aa17.23■□□□□ 0.35
RPAIN-207ENST00000570883 MYD88Q99836 296 aa17.23■□□□□ 0.35
RPAIN-207ENST00000570883 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
RPAIN-207ENST00000570883 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
RPAIN-207ENST00000570883 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
RPAIN-207ENST00000570883 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
RPAIN-207ENST00000570883 SLC51AQ86UW1 340 aa17.22■□□□□ 0.35
RPAIN-207ENST00000570883 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
RPAIN-207ENST00000570883 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
RPAIN-207ENST00000570883 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-207ENST00000570883 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 E9PSI1 815 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 FLIIQ13045 1269 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 FAM89AQ96GI7 184 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
RPAIN-207ENST00000570883 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
RPAIN-207ENST00000570883 RTL5Q5HYW3 569 aaPredicted RBP17.2■□□□□ 0.34
RPAIN-207ENST00000570883 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
RPAIN-207ENST00000570883 LMNB1P20700 586 aa17.19■□□□□ 0.34
RPAIN-207ENST00000570883 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
RPAIN-207ENST00000570883 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-207ENST00000570883 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
RPAIN-207ENST00000570883 SPEF2Q9C093 1822 aa17.19■□□□□ 0.34
RPAIN-207ENST00000570883 ABCC4O15439 1325 aa17.19■□□□□ 0.34
RPAIN-207ENST00000570883 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
RPAIN-207ENST00000570883 SOGA3Q5TF21 947 aa17.18■□□□□ 0.34
RPAIN-207ENST00000570883 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
RPAIN-207ENST00000570883 CCDC191Q8NCU4 936 aa17.18■□□□□ 0.34
RPAIN-207ENST00000570883 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
RPAIN-207ENST00000570883 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
RPAIN-207ENST00000570883 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-207ENST00000570883 ZBTB38Q8NAP3 1195 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-207ENST00000570883 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
RPAIN-207ENST00000570883 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-207ENST00000570883 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-207ENST00000570883 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-207ENST00000570883 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
RPAIN-207ENST00000570883 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-207ENST00000570883 LTBP1Q14766 1721 aa17.16■□□□□ 0.34
RPAIN-207ENST00000570883 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
RPAIN-207ENST00000570883 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
RPAIN-207ENST00000570883 GPBP1L1Q9HC44 474 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-207ENST00000570883 COL4A5P29400 1685 aa17.15■□□□□ 0.34
RPAIN-207ENST00000570883 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.33
RPAIN-207ENST00000570883 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
RPAIN-207ENST00000570883 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
RPAIN-207ENST00000570883 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
RPAIN-207ENST00000570883 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.33
RPAIN-207ENST00000570883 F6X3S4 739 aa17.13■□□□□ 0.33
RPAIN-207ENST00000570883 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
RPAIN-207ENST00000570883 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
RPAIN-207ENST00000570883 GRAPQ13588 217 aa17.12■□□□□ 0.33
RPAIN-207ENST00000570883 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
RPAIN-207ENST00000570883 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms