RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 NTSR2O95665 410 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 PRELPP51888 382 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 GNAI1P63096 354 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
TRIM25-204ENST00000570749 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
TRIM25-204ENST00000570749 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 PSMD1Q99460 953 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
TRIM25-204ENST00000570749 IFT57Q9NWB7 429 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 LAMB2P55268 1798 aa12.6□□□□□ -0.39
TRIM25-204ENST00000570749 GPTP24298 496 aa12.59□□□□□ -0.39
TRIM25-204ENST00000570749 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
TRIM25-204ENST00000570749 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
TRIM25-204ENST00000570749 HYPKQ9NX55 129 aa12.59□□□□□ -0.39
TRIM25-204ENST00000570749 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
TRIM25-204ENST00000570749 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
TRIM25-204ENST00000570749 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
TRIM25-204ENST00000570749 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
TRIM25-204ENST00000570749 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
TRIM25-204ENST00000570749 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
TRIM25-204ENST00000570749 VPS33BQ9H267 617 aa12.58□□□□□ -0.4
TRIM25-204ENST00000570749 CACNA1FO60840 1977 aa12.58□□□□□ -0.4
TRIM25-204ENST00000570749 APAF1O14727 1248 aa12.57□□□□□ -0.4
TRIM25-204ENST00000570749 HSP90B1P14625 803 aaKnown RBP12.57□□□□□ -0.4
TRIM25-204ENST00000570749 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
TRIM25-204ENST00000570749 TMC4Q7Z404 712 aa12.57□□□□□ -0.4
TRIM25-204ENST00000570749 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
TRIM25-204ENST00000570749 XAGE3Q8WTP9 111 aa12.57□□□□□ -0.4
TRIM25-204ENST00000570749 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
TRIM25-204ENST00000570749 SH3TC1Q8TE82 1336 aa12.57□□□□□ -0.4
TRIM25-204ENST00000570749 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
TRIM25-204ENST00000570749 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 JDP2Q8WYK2 163 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 CHPF2Q9P2E5 772 aa12.56□□□□□ -0.4
TRIM25-204ENST00000570749 DDX60Q8IY21 1712 aaKnown RBP12.56□□□□□ -0.4
TRIM25-204ENST00000570749 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
TRIM25-204ENST00000570749 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
TRIM25-204ENST00000570749 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
TRIM25-204ENST00000570749 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
TRIM25-204ENST00000570749 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 FZD9O00144 591 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 ANP32CO43423 234 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 BBOX1O75936 387 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 ANXA1P04083 346 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
TRIM25-204ENST00000570749 GPC2Q8N158 579 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
TRIM25-204ENST00000570749 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
TRIM25-204ENST00000570749 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
TRIM25-204ENST00000570749 POTECB2RU33 542 aa12.53□□□□□ -0.4
TRIM25-204ENST00000570749 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
TRIM25-204ENST00000570749 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
TRIM25-204ENST00000570749 PNMA8AQ86V59 439 aaPredicted RBP12.53□□□□□ -0.4
TRIM25-204ENST00000570749 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
TRIM25-204ENST00000570749 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
TRIM25-204ENST00000570749 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
TRIM25-204ENST00000570749 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
TRIM25-204ENST00000570749 IL16Q14005 1332 aa12.53□□□□□ -0.4
TRIM25-204ENST00000570749 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
TRIM25-204ENST00000570749 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
TRIM25-204ENST00000570749 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
TRIM25-204ENST00000570749 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
TRIM25-204ENST00000570749 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
TRIM25-204ENST00000570749 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
TRIM25-204ENST00000570749 ABCC4O15439 1325 aa12.52□□□□□ -0.41
TRIM25-204ENST00000570749 ADAMTSL1Q8N6G6 1762 aa12.51□□□□□ -0.41
TRIM25-204ENST00000570749 GRAPQ13588 217 aa12.51□□□□□ -0.41
TRIM25-204ENST00000570749 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
TRIM25-204ENST00000570749 DNAJC5GQ8N7S2 189 aa12.51□□□□□ -0.41
TRIM25-204ENST00000570749 GRAPLQ8TC17 118 aaPredicted RBP12.51□□□□□ -0.41
TRIM25-204ENST00000570749 KLRG1Q96E93 195 aa12.51□□□□□ -0.41
TRIM25-204ENST00000570749 RTFDC1Q9BY42 306 aaPredicted RBP12.51□□□□□ -0.41
TRIM25-204ENST00000570749 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
TRIM25-204ENST00000570749 RIC3Q7Z5B4 369 aa12.5□□□□□ -0.41
TRIM25-204ENST00000570749 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
TRIM25-204ENST00000570749 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
TRIM25-204ENST00000570749 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
TRIM25-204ENST00000570749 MYH3P11055 1940 aa12.5□□□□□ -0.41
TRIM25-204ENST00000570749 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 LMOD1P29536 600 aaPredicted RBP12.49□□□□□ -0.41
TRIM25-204ENST00000570749 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
TRIM25-204ENST00000570749 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
TRIM25-204ENST00000570749 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 PCNTO95613 3336 aa12.49□□□□□ -0.41
TRIM25-204ENST00000570749 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
TRIM25-204ENST00000570749 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
TRIM25-204ENST00000570749 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
TRIM25-204ENST00000570749 WWC1Q8IX03 1113 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms