RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 DIEXFQ68CQ4 756 aaKnown RBP14.35□□□□□ -0.11
SMG6-206ENST00000570668 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
SMG6-206ENST00000570668 ISCA1Q9BUE6 129 aa14.35□□□□□ -0.11
SMG6-206ENST00000570668 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
SMG6-206ENST00000570668 SLX4Q8IY92 1834 aa14.34□□□□□ -0.11
SMG6-206ENST00000570668 TNRC6CQ9HCJ0 1690 aaKnown RBP14.34□□□□□ -0.11
SMG6-206ENST00000570668 EXOSC9Q06265 439 aaKnown RBP14.34□□□□□ -0.11
SMG6-206ENST00000570668 TRIM28Q13263 835 aaKnown RBP14.34□□□□□ -0.11
SMG6-206ENST00000570668 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
SMG6-206ENST00000570668 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
SMG6-206ENST00000570668 STK31Q9BXU1 1019 aa14.34□□□□□ -0.11
SMG6-206ENST00000570668 ARFGEF2Q9Y6D5 1785 aa14.33□□□□□ -0.12
SMG6-206ENST00000570668 C21orf2O43822 256 aa14.33□□□□□ -0.12
SMG6-206ENST00000570668 VAMP4O75379 141 aa14.33□□□□□ -0.12
SMG6-206ENST00000570668 DDX58O95786 925 aaKnown RBP14.33□□□□□ -0.12
SMG6-206ENST00000570668 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
SMG6-206ENST00000570668 HOXA10P31260 410 aaPredicted RBP14.33□□□□□ -0.12
SMG6-206ENST00000570668 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
SMG6-206ENST00000570668 SBF1O95248 1867 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 NFKBIEO00221 500 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 SOGA3Q5TF21 947 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 TRMT112Q9UI30 125 aaKnown RBP14.32□□□□□ -0.12
SMG6-206ENST00000570668 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
SMG6-206ENST00000570668 TCERG1O14776 1098 aaKnown RBP14.31□□□□□ -0.12
SMG6-206ENST00000570668 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
SMG6-206ENST00000570668 RASSF7Q02833 373 aa14.31□□□□□ -0.12
SMG6-206ENST00000570668 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
SMG6-206ENST00000570668 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
SMG6-206ENST00000570668 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
SMG6-206ENST00000570668 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
SMG6-206ENST00000570668 FER1L6Q2WGJ9 1857 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 LMNB1P20700 586 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 PRELPP51888 382 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 KSR2Q6VAB6 950 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 MIER1Q8N108 512 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 SYNE4Q8N205 404 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 RPGRQ92834 1020 aaKnown RBP14.3□□□□□ -0.12
SMG6-206ENST00000570668 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 METTL22Q9BUU2 404 aaPredicted RBP14.3□□□□□ -0.12
SMG6-206ENST00000570668 RNF181Q9P0P0 153 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
SMG6-206ENST00000570668 PI4KAP2A4QPH2 592 aa14.29□□□□□ -0.12
SMG6-206ENST00000570668 HCLS1P14317 486 aaPredicted RBP14.29□□□□□ -0.12
SMG6-206ENST00000570668 G2E3Q7L622 706 aa14.29□□□□□ -0.12
SMG6-206ENST00000570668 PI4KAP1Q8N8J0 262 aa14.29□□□□□ -0.12
SMG6-206ENST00000570668 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
SMG6-206ENST00000570668 MYD88Q99836 296 aa14.29□□□□□ -0.12
SMG6-206ENST00000570668 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
SMG6-206ENST00000570668 E9PSI1 815 aa14.28□□□□□ -0.12
SMG6-206ENST00000570668 FLIIQ13045 1269 aa14.28□□□□□ -0.12
SMG6-206ENST00000570668 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
SMG6-206ENST00000570668 CCDC191Q8NCU4 936 aa14.28□□□□□ -0.12
SMG6-206ENST00000570668 FAM89AQ96GI7 184 aa14.28□□□□□ -0.12
SMG6-206ENST00000570668 TAOK3Q9H2K8 898 aa14.28□□□□□ -0.12
SMG6-206ENST00000570668 GPBP1L1Q9HC44 474 aaPredicted RBP14.28□□□□□ -0.12
SMG6-206ENST00000570668 ZC3H4Q9UPT8 1303 aaKnown RBP14.28□□□□□ -0.12
SMG6-206ENST00000570668 SLFN5Q08AF3 891 aa14.27□□□□□ -0.13
SMG6-206ENST00000570668 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
SMG6-206ENST00000570668 ZBTB38Q8NAP3 1195 aaPredicted RBP14.27□□□□□ -0.13
SMG6-206ENST00000570668 ZNF428Q96B54 188 aa14.27□□□□□ -0.13
SMG6-206ENST00000570668 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.13
SMG6-206ENST00000570668 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
SMG6-206ENST00000570668 SF3B3Q15393 1217 aaKnown RBP14.26□□□□□ -0.13
SMG6-206ENST00000570668 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
SMG6-206ENST00000570668 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
SMG6-206ENST00000570668 ZNF526Q8TF50 670 aaPredicted RBP14.26□□□□□ -0.13
SMG6-206ENST00000570668 CWC25Q9NXE8 425 aaPredicted RBP14.26□□□□□ -0.13
SMG6-206ENST00000570668 LAMB2P55268 1798 aa14.26□□□□□ -0.13
SMG6-206ENST00000570668 SNED1Q8TER0 1413 aa14.25□□□□□ -0.13
SMG6-206ENST00000570668 DDX60Q8IY21 1712 aaKnown RBP14.25□□□□□ -0.13
SMG6-206ENST00000570668 IRS4O14654 1257 aaPredicted RBP14.25□□□□□ -0.13
SMG6-206ENST00000570668 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
SMG6-206ENST00000570668 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
SMG6-206ENST00000570668 FKBP5Q13451 457 aaPredicted RBP14.25□□□□□ -0.13
SMG6-206ENST00000570668 GRIPAP1Q4V328 841 aa14.25□□□□□ -0.13
SMG6-206ENST00000570668 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
SMG6-206ENST00000570668 ABCC4O15439 1325 aa14.24□□□□□ -0.13
SMG6-206ENST00000570668 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
SMG6-206ENST00000570668 BBOX1O75936 387 aa14.24□□□□□ -0.13
SMG6-206ENST00000570668 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
SMG6-206ENST00000570668 FKBP4Q02790 459 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMG6-206ENST00000570668 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
SMG6-206ENST00000570668 TRMT2AQ8IZ69 625 aaKnown RBP14.24□□□□□ -0.13
SMG6-206ENST00000570668 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
SMG6-206ENST00000570668 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
SMG6-206ENST00000570668 DICER1Q9UPY3 1922 aaKnown RBP14.23□□□□□ -0.13
SMG6-206ENST00000570668 NEURL1BA8MQ27 555 aa14.23□□□□□ -0.13
SMG6-206ENST00000570668 PSMD1Q99460 953 aa14.23□□□□□ -0.13
SMG6-206ENST00000570668 ATP6V0A2Q9Y487 856 aa14.23□□□□□ -0.13
SMG6-206ENST00000570668 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
SMG6-206ENST00000570668 GRAPQ13588 217 aa14.22□□□□□ -0.13
SMG6-206ENST00000570668 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
SMG6-206ENST00000570668 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
SMG6-206ENST00000570668 GRAPLQ8TC17 118 aaPredicted RBP14.22□□□□□ -0.13
SMG6-206ENST00000570668 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
SMG6-206ENST00000570668 GLTPD2A6NH11 291 aa14.21□□□□□ -0.13
SMG6-206ENST00000570668 KIF3CO14782 793 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms