RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
CHRNB1-203ENST00000570557 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
CHRNB1-203ENST00000570557 PPP1R42Q7Z4L9 355 aa16.72■□□□□ 0.27
CHRNB1-203ENST00000570557 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
CHRNB1-203ENST00000570557 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
CHRNB1-203ENST00000570557 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
CHRNB1-203ENST00000570557 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
CHRNB1-203ENST00000570557 FER1L6Q2WGJ9 1857 aa16.7■□□□□ 0.26
CHRNB1-203ENST00000570557 NPR1P16066 1061 aa16.7■□□□□ 0.26
CHRNB1-203ENST00000570557 HOXA10P31260 410 aaPredicted RBP16.7■□□□□ 0.26
CHRNB1-203ENST00000570557 ZNF784Q8NCA9 323 aaPredicted RBP16.7■□□□□ 0.26
CHRNB1-203ENST00000570557 C7orf43Q8WVR3 580 aa16.7■□□□□ 0.26
CHRNB1-203ENST00000570557 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHRNB1-203ENST00000570557 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
CHRNB1-203ENST00000570557 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
CHRNB1-203ENST00000570557 C3orf67Q6ZVT6 689 aa16.69■□□□□ 0.26
CHRNB1-203ENST00000570557 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
CHRNB1-203ENST00000570557 G2E3Q7L622 706 aa16.68■□□□□ 0.26
CHRNB1-203ENST00000570557 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
CHRNB1-203ENST00000570557 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
CHRNB1-203ENST00000570557 LAMB2P55268 1798 aa16.68■□□□□ 0.26
CHRNB1-203ENST00000570557 E9PSI1 815 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 TCERG1O14776 1098 aaKnown RBP16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 PRELPP51888 382 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
CHRNB1-203ENST00000570557 NFKBIEO00221 500 aa16.66■□□□□ 0.26
CHRNB1-203ENST00000570557 C21orf2O43822 256 aa16.66■□□□□ 0.26
CHRNB1-203ENST00000570557 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
CHRNB1-203ENST00000570557 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
CHRNB1-203ENST00000570557 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
CHRNB1-203ENST00000570557 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
CHRNB1-203ENST00000570557 SNED1Q8TER0 1413 aa16.65■□□□□ 0.26
CHRNB1-203ENST00000570557 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
CHRNB1-203ENST00000570557 CRAMP1Q96RY5 1269 aa16.65■□□□□ 0.26
CHRNB1-203ENST00000570557 MAP3K2Q9Y2U5 619 aa16.65■□□□□ 0.26
CHRNB1-203ENST00000570557 PI4KAP2A4QPH2 592 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 FLIIQ13045 1269 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 C9orf131Q5VYM1 1079 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 PI4KAP1Q8N8J0 262 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 CCDC191Q8NCU4 936 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 MYD88Q99836 296 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 LTBP3Q9NS15 1303 aa16.64■□□□□ 0.25
CHRNB1-203ENST00000570557 DICER1Q9UPY3 1922 aaKnown RBP16.63■□□□□ 0.25
CHRNB1-203ENST00000570557 IGKV5-2P06315 115 aa16.63■□□□□ 0.25
CHRNB1-203ENST00000570557 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
CHRNB1-203ENST00000570557 RASSF7Q02833 373 aa16.63■□□□□ 0.25
CHRNB1-203ENST00000570557 SOGA3Q5TF21 947 aa16.63■□□□□ 0.25
CHRNB1-203ENST00000570557 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
CHRNB1-203ENST00000570557 LMNB1P20700 586 aa16.62■□□□□ 0.25
CHRNB1-203ENST00000570557 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
CHRNB1-203ENST00000570557 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
CHRNB1-203ENST00000570557 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
CHRNB1-203ENST00000570557 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
CHRNB1-203ENST00000570557 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
CHRNB1-203ENST00000570557 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
CHRNB1-203ENST00000570557 OLFM4Q6UX06 510 aa16.6■□□□□ 0.25
CHRNB1-203ENST00000570557 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
CHRNB1-203ENST00000570557 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
CHRNB1-203ENST00000570557 TAF1P21675 1872 aa16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 RNF181Q9P0P0 153 aa16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 ABCC4O15439 1325 aa16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
CHRNB1-203ENST00000570557 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
CHRNB1-203ENST00000570557 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
CHRNB1-203ENST00000570557 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
CHRNB1-203ENST00000570557 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
CHRNB1-203ENST00000570557 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
CHRNB1-203ENST00000570557 CDHR2Q9BYE9 1310 aa16.58■□□□□ 0.24
CHRNB1-203ENST00000570557 TIAM2Q8IVF5 1701 aa16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 BBOX1O75936 387 aa16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 CWF19L2Q2TBE0 894 aaKnown RBP16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 SLC51AQ86UW1 340 aa16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
CHRNB1-203ENST00000570557 COL4A1P02462 1669 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 H7C1W4 665 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 PPEF1O14829 653 aaPredicted RBP16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 CASP7P55210 303 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 PSMD1Q99460 953 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
CHRNB1-203ENST00000570557 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 GRAPQ13588 217 aa16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 GCKRQ14397 625 aa16.55■□□□□ 0.24
CHRNB1-203ENST00000570557 BEND3Q5T5X7 828 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms