RNA–Protein interactions for RNA: ENST00000570088.1

IRF8-211, Transcript of interferon regulatory factor 8, humanhuman

TSL 4

Gene IRF8, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-211ENST00000570088 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
IRF8-211ENST00000570088 OLFM4Q6UX06 510 aa19.78■□□□□ 0.76
IRF8-211ENST00000570088 PPP1R42Q7Z4L9 355 aa19.78■□□□□ 0.76
IRF8-211ENST00000570088 ZNF853P0CG23 659 aa19.77■□□□□ 0.76
IRF8-211ENST00000570088 CALD1Q05682 793 aaKnown RBP19.76■□□□□ 0.75
IRF8-211ENST00000570088 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
IRF8-211ENST00000570088 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
IRF8-211ENST00000570088 IFT57Q9NWB7 429 aa19.76■□□□□ 0.75
IRF8-211ENST00000570088 HSP90AB3PQ58FF7 597 aa19.75■□□□□ 0.75
IRF8-211ENST00000570088 UTP14AQ9BVJ6 771 aaKnown RBP19.75■□□□□ 0.75
IRF8-211ENST00000570088 WDR90Q96KV7 1748 aa19.74■□□□□ 0.75
IRF8-211ENST00000570088 HOXA10P31260 410 aaPredicted RBP19.74■□□□□ 0.75
IRF8-211ENST00000570088 GNAI1P63096 354 aa19.74■□□□□ 0.75
IRF8-211ENST00000570088 FKBP4Q02790 459 aaKnown RBP eCLIP19.74■□□□□ 0.75
IRF8-211ENST00000570088 DPY19L2Q6NUT2 758 aa19.74■□□□□ 0.75
IRF8-211ENST00000570088 C3orf67Q6ZVT6 689 aa19.74■□□□□ 0.75
IRF8-211ENST00000570088 DBF4Q9UBU7 674 aaPredicted RBP19.74■□□□□ 0.75
IRF8-211ENST00000570088 IFFO2Q5TF58 517 aa19.73■□□□□ 0.75
IRF8-211ENST00000570088 NLRP10Q86W26 655 aa19.73■□□□□ 0.75
IRF8-211ENST00000570088 RTKN2Q8IZC4 609 aa19.73■□□□□ 0.75
IRF8-211ENST00000570088 SNED1Q8TER0 1413 aa19.73■□□□□ 0.75
IRF8-211ENST00000570088 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
IRF8-211ENST00000570088 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
IRF8-211ENST00000570088 TCIRG1Q13488 830 aa19.72■□□□□ 0.75
IRF8-211ENST00000570088 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
IRF8-211ENST00000570088 LAMB2P55268 1798 aa19.71■□□□□ 0.75
IRF8-211ENST00000570088 ANP32CO43423 234 aa19.71■□□□□ 0.75
IRF8-211ENST00000570088 SLC10A5Q5PT55 438 aa19.71■□□□□ 0.75
IRF8-211ENST00000570088 PLBD2Q8NHP8 589 aa19.71■□□□□ 0.75
IRF8-211ENST00000570088 RBM17Q96I25 401 aaKnown RBP19.71■□□□□ 0.75
IRF8-211ENST00000570088 NLRP3Q96P20 1036 aa19.71■□□□□ 0.75
IRF8-211ENST00000570088 HYPKQ9NX55 129 aa19.71■□□□□ 0.75
IRF8-211ENST00000570088 POTECB2RU33 542 aa19.7■□□□□ 0.74
IRF8-211ENST00000570088 ANKRD13DQ6ZTN6 518 aa19.7■□□□□ 0.74
IRF8-211ENST00000570088 SMC1BQ8NDV3 1235 aa19.7■□□□□ 0.74
IRF8-211ENST00000570088 CRAMP1Q96RY5 1269 aa19.7■□□□□ 0.74
IRF8-211ENST00000570088 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
IRF8-211ENST00000570088 ELL2O00472 640 aaPredicted RBP19.69■□□□□ 0.74
IRF8-211ENST00000570088 PPEF1O14829 653 aaPredicted RBP19.69■□□□□ 0.74
IRF8-211ENST00000570088 SYNE4Q8N205 404 aa19.69■□□□□ 0.74
IRF8-211ENST00000570088 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
IRF8-211ENST00000570088 DDNO94850 711 aaPredicted RBP19.68■□□□□ 0.74
IRF8-211ENST00000570088 HCLS1P14317 486 aaPredicted RBP19.68■□□□□ 0.74
IRF8-211ENST00000570088 IARSP41252 1262 aaKnown RBP19.68■□□□□ 0.74
IRF8-211ENST00000570088 CC2D2BQ6DHV5 1058 aa19.68■□□□□ 0.74
IRF8-211ENST00000570088 SLC51AQ86UW1 340 aa19.68■□□□□ 0.74
IRF8-211ENST00000570088 C8orf58Q8NAV2 365 aa19.68■□□□□ 0.74
IRF8-211ENST00000570088 ZNF428Q96B54 188 aa19.68■□□□□ 0.74
IRF8-211ENST00000570088 PSMD1Q99460 953 aa19.68■□□□□ 0.74
IRF8-211ENST00000570088 SH3TC1Q8TE82 1336 aa19.68■□□□□ 0.74
IRF8-211ENST00000570088 TCERG1O14776 1098 aaKnown RBP19.67■□□□□ 0.74
IRF8-211ENST00000570088 ABCC4O15439 1325 aa19.67■□□□□ 0.74
IRF8-211ENST00000570088 DDX60Q8IY21 1712 aaKnown RBP19.66■□□□□ 0.74
IRF8-211ENST00000570088 CCDC27Q2M243 656 aa19.66■□□□□ 0.74
IRF8-211ENST00000570088 ISCA1Q9BUE6 129 aa19.66■□□□□ 0.74
IRF8-211ENST00000570088 ZNF541Q9H0D2 1346 aa19.66■□□□□ 0.74
IRF8-211ENST00000570088 ATP5J2-PTCD1G3V325 749 aa19.65■□□□□ 0.74
IRF8-211ENST00000570088 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
IRF8-211ENST00000570088 TSR2Q969E8 191 aaKnown RBP19.65■□□□□ 0.74
IRF8-211ENST00000570088 PHAXQ9H814 394 aaKnown RBP19.65■□□□□ 0.74
IRF8-211ENST00000570088 GOLGA2Q08379 1002 aa19.64■□□□□ 0.73
IRF8-211ENST00000570088 GRIPAP1Q4V328 841 aa19.64■□□□□ 0.73
IRF8-211ENST00000570088 WWC1Q8IX03 1113 aa19.64■□□□□ 0.73
IRF8-211ENST00000570088 COL4A5P29400 1685 aa19.64■□□□□ 0.73
IRF8-211ENST00000570088 RIC3Q7Z5B4 369 aa19.63■□□□□ 0.73
IRF8-211ENST00000570088 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
IRF8-211ENST00000570088 L3MBTL3Q96JM7 780 aaPredicted RBP19.63■□□□□ 0.73
IRF8-211ENST00000570088 ATP6V0A2Q9Y487 856 aa19.63■□□□□ 0.73
IRF8-211ENST00000570088 FZD9O00144 591 aa19.62■□□□□ 0.73
IRF8-211ENST00000570088 HTRA3P83110 453 aa19.62■□□□□ 0.73
IRF8-211ENST00000570088 JDP2Q8WYK2 163 aa19.62■□□□□ 0.73
IRF8-211ENST00000570088 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
IRF8-211ENST00000570088 FAM89AQ96GI7 184 aa19.62■□□□□ 0.73
IRF8-211ENST00000570088 TMX4Q9H1E5 349 aaPredicted RBP19.62■□□□□ 0.73
IRF8-211ENST00000570088 SCN4AP35499 1836 aa19.62■□□□□ 0.73
IRF8-211ENST00000570088 IQCA1LA6NCM1 817 aa19.61■□□□□ 0.73
IRF8-211ENST00000570088 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
IRF8-211ENST00000570088 DDX46Q7L014 1031 aaKnown RBP19.61■□□□□ 0.73
IRF8-211ENST00000570088 BBOX1O75936 387 aa19.6■□□□□ 0.73
IRF8-211ENST00000570088 TRIM28Q13263 835 aaKnown RBP19.6■□□□□ 0.73
IRF8-211ENST00000570088 GRAPQ13588 217 aa19.6■□□□□ 0.73
IRF8-211ENST00000570088 NCBP3Q53F19 620 aaKnown RBP19.6■□□□□ 0.73
IRF8-211ENST00000570088 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
IRF8-211ENST00000570088 LARGE2Q8N3Y3 721 aa19.6■□□□□ 0.73
IRF8-211ENST00000570088 GRAPLQ8TC17 118 aaPredicted RBP19.6■□□□□ 0.73
IRF8-211ENST00000570088 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
IRF8-211ENST00000570088 TAF1P21675 1872 aa19.6■□□□□ 0.73
IRF8-211ENST00000570088 IL16Q14005 1332 aa19.59■□□□□ 0.73
IRF8-211ENST00000570088 POTEIP0CG38 1075 aa19.59■□□□□ 0.73
IRF8-211ENST00000570088 POTEJP0CG39 1038 aa19.59■□□□□ 0.73
IRF8-211ENST00000570088 JMYQ8N9B5 988 aa19.59■□□□□ 0.73
IRF8-211ENST00000570088 MYD88Q99836 296 aa19.59■□□□□ 0.73
IRF8-211ENST00000570088 SP8Q8IXZ3 490 aa19.58■□□□□ 0.72
IRF8-211ENST00000570088 GPC2Q8N158 579 aa19.58■□□□□ 0.72
IRF8-211ENST00000570088 TAF1DQ9H5J8 278 aaPredicted RBP19.58■□□□□ 0.72
IRF8-211ENST00000570088 LRRC37AA6NMS7 1700 aa19.58■□□□□ 0.72
IRF8-211ENST00000570088 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
IRF8-211ENST00000570088 PPIP5K2O43314 1243 aa19.57■□□□□ 0.72
IRF8-211ENST00000570088 DDX58O95786 925 aaKnown RBP19.57■□□□□ 0.72
IRF8-211ENST00000570088 EIF6P56537 245 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms