RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 MSNP26038 577 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 RBM8AQ9Y5S9 174 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-217ENST00000570001 GOLIM4O00461 696 aa13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 DDX46Q7L014 1031 aaKnown RBP13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 IL15P40933 162 aaPredicted RBP13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 PXDNLA1KZ92 1463 aa13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 TRDNQ13061 729 aa13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 SH2B1Q9NRF2 756 aaPredicted RBP13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 RAD50Q92878 1312 aa13.9□□□□□ -0.18
PDXDC1-217ENST00000570001 FIBPO43427 364 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 RALYLQ86SE5 291 aaKnown RBP13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 EAF2Q96CJ1 260 aaPredicted RBP13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 TNNI3KQ59H18 835 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 CCDC191Q8NCU4 936 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.89□□□□□ -0.198e-7■■□□□ 14.4
PDXDC1-217ENST00000570001 FPGT-TNNI3KV9GXZ4 949 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 ERBB4Q15303 1308 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 PALD1Q9ULE6 856 aa13.89□□□□□ -0.19
PDXDC1-217ENST00000570001 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 MPHOSPH8Q99549 860 aa13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 HSPA4P34932 840 aa13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 MST1RQ04912 1400 aa13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 MTX1Q13505 466 aa13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 LDHAL6AQ6ZMR3 332 aa13.88□□□□□ -0.19
PDXDC1-217ENST00000570001 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 IGKV5-2P06315 115 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 DNAJC10Q8IXB1 793 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 KIF2CQ99661 725 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 CPLX1O14810 134 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 AK2P54819 239 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 INTS4Q96HW7 963 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 HMG20BQ9P0W2 317 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 FOSBP53539 338 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 DBNDD2Q9BQY9 259 aa13.87□□□□□ -0.19
PDXDC1-217ENST00000570001 DCCP43146 1447 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 PXDNQ92626 1479 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 VPS37DQ86XT2 251 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 DDB1Q16531 1140 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 CREB3L3Q68CJ9 461 aa13.86□□□□□ -0.19
PDXDC1-217ENST00000570001 FAM89AQ96GI7 184 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 LMTK3Q96Q04 1460 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 NCOA3Q9Y6Q9 1424 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 ACSBG1Q96GR2 724 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 NAP1L5Q96NT1 182 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 COPRSQ9NQ92 184 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 CPA1P15085 419 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 MCMDC2Q4G0Z9 681 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 NALCNQ8IZF0 1738 aa13.85□□□□□ -0.19
PDXDC1-217ENST00000570001 EYA2O00167 538 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 TIMM10P62072 90 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 TCEANC2Q96MN5 208 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 STX6O43752 255 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 PAG1Q9NWQ8 432 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 IDH1O75874 414 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 GJB2P29033 226 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 CPLX2Q6PUV4 134 aaKnown RBP13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 RNF214Q8ND24 703 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 OVOS2A0A0G2JMS6 1433 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 SASH1O94885 1247 aa13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-217ENST00000570001 BICD2Q8TD16 824 aa13.83□□□□□ -0.19
PDXDC1-217ENST00000570001 NEK1Q96PY6 1258 aa13.83□□□□□ -0.19
PDXDC1-217ENST00000570001 TLR7Q9NYK1 1049 aaKnown RBP13.83□□□□□ -0.19
PDXDC1-217ENST00000570001 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 SF3A1Q15459 793 aaKnown RBP13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 NFAT5O94916 1531 aa13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 PDIA4P13667 645 aaKnown RBP13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 NECAB1Q8N987 351 aa13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 ASAP1Q9ULH1 1129 aa13.83□□□□□ -0.2
PDXDC1-217ENST00000570001 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 ATP5JP18859 108 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 KRT85P78386 507 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
PDXDC1-217ENST00000570001 EDC3Q96F86 508 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms