RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
HCCAT5-201ENST00000569990 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
HCCAT5-201ENST00000569990 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
HCCAT5-201ENST00000569990 IBTKQ9P2D0 1353 aaPredicted RBP12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 NPHP1O15259 732 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 YBX3P16989 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 CHRNA5P30532 468 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 ST5P78524 1137 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 GPR162Q16538 588 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 ANKRD31Q8N7Z5 1873 aa12.31□□□□□ -0.44
HCCAT5-201ENST00000569990 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 UTRNP46939 3433 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 NTSR2O95665 410 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 DDX58O95786 925 aaKnown RBP12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 G2E3Q7L622 706 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 RIC3Q7Z5B4 369 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 ARFGEF2Q9Y6D5 1785 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
HCCAT5-201ENST00000569990 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 PDE6BP35913 854 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 FLIIQ13045 1269 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 C2CD5Q86YS7 1000 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 ISCA1Q9BUE6 129 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 PIM2Q9P1W9 311 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 ADCY9O60503 1353 aa12.29□□□□□ -0.44
HCCAT5-201ENST00000569990 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 ATP5J2-PTCD1G3V325 749 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 H0YIN7 160 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 KSR2Q6VAB6 950 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 COL11A2P13942 1736 aaPredicted RBP12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
HCCAT5-201ENST00000569990 KLRG2A4D1S0 409 aaPredicted RBP12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 GABBR2O75899 941 aa12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 MYD88Q99836 296 aa12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 MAP3K2Q9Y2U5 619 aa12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
HCCAT5-201ENST00000569990 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 CT47B1P0C2W7 299 aaPredicted RBP12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 SRGNP10124 158 aa12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 FKBP5Q13451 457 aaPredicted RBP12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 DALRD3Q5D0E6 543 aaKnown RBP12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
HCCAT5-201ENST00000569990 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 SLC10A5Q5PT55 438 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 STYK1Q6J9G0 422 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 SYNE4Q8N205 404 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 TTLL6Q8N841 843 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 CCDC191Q8NCU4 936 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 SH3TC1Q8TE82 1336 aa12.25□□□□□ -0.45
HCCAT5-201ENST00000569990 IGKV5-2P06315 115 aa12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 NPR1P16066 1061 aa12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 DNAAF4Q8WXU2 420 aa12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
HCCAT5-201ENST00000569990 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 C3orf67Q6ZVT6 689 aa12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 CNKSR1Q969H4 720 aa12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 CWC25Q9NXE8 425 aaPredicted RBP12.23□□□□□ -0.45
HCCAT5-201ENST00000569990 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 F6X3S4 739 aa12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 PRPF40BQ6NWY9 871 aaKnown RBP12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 NLRP3Q96P20 1036 aa12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
HCCAT5-201ENST00000569990 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
HCCAT5-201ENST00000569990 PCCAP05165 728 aaPredicted RBP12.21□□□□□ -0.45
HCCAT5-201ENST00000569990 HOXA10P31260 410 aaPredicted RBP12.21□□□□□ -0.45
HCCAT5-201ENST00000569990 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
HCCAT5-201ENST00000569990 LINS1Q8NG48 757 aa12.21□□□□□ -0.45
HCCAT5-201ENST00000569990 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms