RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 NBPF14Q5TI25 921 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 TRIM67Q6ZTA4 783 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 FAM160A2Q8N612 972 aaPredicted RBP6.52□□□□□ -1.37
CNOT1-219ENST00000569882 USHBP1Q8N6Y0 703 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 HLA-CQ95604 372 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 PRDM9Q9NQV7 894 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 EMILIN1Q9Y6C2 1016 aa6.52□□□□□ -1.37
CNOT1-219ENST00000569882 TNS1Q9HBL0 1735 aaKnown RBP6.51□□□□□ -1.37
CNOT1-219ENST00000569882 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 HSP90AB2PQ58FF8 381 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 RNF19BQ6ZMZ0 732 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 ACSBG1Q96GR2 724 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 REPIN1Q9BWE0 567 aaKnown RBP6.51□□□□□ -1.37
CNOT1-219ENST00000569882 INSRP06213 1382 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 KIF24Q5T7B8 1368 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 EP400Q96L91 3159 aa6.51□□□□□ -1.37
CNOT1-219ENST00000569882 SBF2Q86WG5 1849 aa6.5□□□□□ -1.37
CNOT1-219ENST00000569882 PARD3Q8TEW0 1356 aa6.5□□□□□ -1.37
CNOT1-219ENST00000569882 SPRYD7Q5W111 196 aa6.5□□□□□ -1.37
CNOT1-219ENST00000569882 ZCRB1Q8TBF4 217 aaKnown RBP6.5□□□□□ -1.37
CNOT1-219ENST00000569882 ZC3H15Q8WU90 426 aaKnown RBP6.5□□□□□ -1.37
CNOT1-219ENST00000569882 PCDH11XQ9BZA7 1347 aa6.5□□□□□ -1.37
CNOT1-219ENST00000569882 PCDH11YQ9BZA8 1340 aa6.5□□□□□ -1.37
CNOT1-219ENST00000569882 ZMYND10O75800 440 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 FMNL1O95466 1100 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-219ENST00000569882 PRR20EP86478 221 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 PRR20CP86479 221 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 PRR20DP86480 221 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 PRR20BP86481 221 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 PRR20AP86496 221 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
CNOT1-219ENST00000569882 BRICD5Q6PL45 260 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 MARCH10Q8NA82 808 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-219ENST00000569882 GPCPD1Q9NPB8 672 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 AAASQ9NRG9 546 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 SPG7Q9UQ90 795 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 PEAK1Q9H792 1746 aa6.49□□□□□ -1.37
CNOT1-219ENST00000569882 KDM4AO75164 1064 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 ZEB1P37275 1124 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-219ENST00000569882 NFX1Q12986 1120 aaKnown RBP6.48□□□□□ -1.37
CNOT1-219ENST00000569882 R3HDM1Q15032 1099 aaKnown RBP6.48□□□□□ -1.37
CNOT1-219ENST00000569882 NBPF6Q5VWK0 638 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
CNOT1-219ENST00000569882 NBPF4Q96M43 638 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 CFAP53Q96M91 514 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 FAM217BQ9NTX9 383 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-219ENST00000569882 POLKQ9UBT6 870 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 DISP2A7MBM2 1401 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 WASHC2AQ641Q2 1341 aa6.48□□□□□ -1.37
CNOT1-219ENST00000569882 DOT1LQ8TEK3 1739 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 MEGF6O75095 1541 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 NHSQ6T4R5 1651 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 U2SURPO15042 1029 aaKnown RBP6.47□□□□□ -1.37
CNOT1-219ENST00000569882 CLCN1P35523 988 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 GUCA2AQ02747 115 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 C1orf141Q5JVX7 400 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 ZNF598Q86UK7 904 aaKnown RBP6.47□□□□□ -1.37
CNOT1-219ENST00000569882 STK32BQ9NY57 414 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 PPP1R1BQ9UD71 204 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-219ENST00000569882 FCF1Q9Y324 198 aaKnown RBP6.47□□□□□ -1.37
CNOT1-219ENST00000569882 SALL2Q9Y467 1007 aaPredicted RBP6.47□□□□□ -1.37
CNOT1-219ENST00000569882 BTAF1O14981 1849 aa6.47□□□□□ -1.37
CNOT1-219ENST00000569882 TNFRSF10AO00220 468 aa6.46□□□□□ -1.38
CNOT1-219ENST00000569882 NEFMP07197 916 aa6.46□□□□□ -1.38
CNOT1-219ENST00000569882 HMGB2P26583 209 aaKnown RBP6.46□□□□□ -1.38
CNOT1-219ENST00000569882 MTHFSP49914 203 aa6.46□□□□□ -1.38
CNOT1-219ENST00000569882 EIF4A2Q14240 407 aaKnown RBP6.46□□□□□ -1.38
CNOT1-219ENST00000569882 GRIPAP1Q4V328 841 aa6.46□□□□□ -1.38
CNOT1-219ENST00000569882 PLEKHO1Q53GL0 409 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-219ENST00000569882 ZNF697Q5TEC3 545 aa6.46□□□□□ -1.38
CNOT1-219ENST00000569882 RGPD3A6NKT7 1758 aaPredicted RBP6.46□□□□□ -1.38
CNOT1-219ENST00000569882 RGPD4Q7Z3J3 1758 aa6.46□□□□□ -1.38
CNOT1-219ENST00000569882 NUP188Q5SRE5 1749 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 PLSCR1O15162 318 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 HOXA2O43364 376 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 KCNQ2O43526 872 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 DIAPH1O60610 1272 aaKnown RBP6.45□□□□□ -1.38
CNOT1-219ENST00000569882 TXNRD1Q16881 649 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 SULT6B1Q6IMI4 303 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 MPRIPQ6WCQ1 1025 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 CAMKK2Q96RR4 588 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 TMOD3Q9NYL9 352 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 NUDCQ9Y266 331 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 RREB1Q92766 1687 aa6.45□□□□□ -1.38
CNOT1-219ENST00000569882 BCL9O00512 1426 aa6.44□□□□□ -1.38
CNOT1-219ENST00000569882 GDF9O60383 454 aa6.44□□□□□ -1.38
CNOT1-219ENST00000569882 HSP90AB1P08238 724 aaKnown RBP6.44□□□□□ -1.38
CNOT1-219ENST00000569882 AMOTQ4VCS5 1084 aa6.44□□□□□ -1.38
CNOT1-219ENST00000569882 ZNF530Q6P9A1 599 aaPredicted RBP6.44□□□□□ -1.38
CNOT1-219ENST00000569882 SYMPKQ92797 1274 aaKnown RBP6.44□□□□□ -1.38
CNOT1-219ENST00000569882 PKD1L3Q7Z443 1732 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 SHANK3Q9BYB0 1731 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 HMOX1P09601 288 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 SSTR3P32745 418 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-219ENST00000569882 TTLL12Q14166 644 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-219ENST00000569882 Q3C1V9 767 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 MSS51Q4VC12 460 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 SLC27A3Q5K4L6 730 aa6.43□□□□□ -1.38
CNOT1-219ENST00000569882 PTF1AQ7RTS3 328 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms