RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 BTLAQ7Z6A9 289 aa10.66□□□□□ -0.7
CHD9-220ENST00000569794 FLIIQ13045 1269 aa10.65□□□□□ -0.7
CHD9-220ENST00000569794 PSMG3-AS1Q96PY0 264 aa10.65□□□□□ -0.7
CHD9-220ENST00000569794 C2orf49Q9BVC5 232 aaPredicted RBP10.65□□□□□ -0.7
CHD9-220ENST00000569794 UBE2OQ9C0C9 1292 aaKnown RBP10.65□□□□□ -0.7
CHD9-220ENST00000569794 SLC6A14Q9UN76 642 aa10.65□□□□□ -0.7
CHD9-220ENST00000569794 C9orf172C9J069 976 aa10.64□□□□□ -0.71
CHD9-220ENST00000569794 TBC1D8BQ0IIM8 1120 aa10.64□□□□□ -0.71
CHD9-220ENST00000569794 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
CHD9-220ENST00000569794 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
CHD9-220ENST00000569794 ELNP15502 786 aa10.63□□□□□ -0.71
CHD9-220ENST00000569794 HIF1AQ16665 826 aa10.63□□□□□ -0.71
CHD9-220ENST00000569794 EFCC1Q9HA90 598 aa10.63□□□□□ -0.71
CHD9-220ENST00000569794 A0A0A0MRY4 1105 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 SCO2A0A1W2PP80 73 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 SELPP16109 830 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 ADGRE1Q14246 886 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 SCG3Q8WXD2 468 aaKnown RBP10.62□□□□□ -0.71
CHD9-220ENST00000569794 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
CHD9-220ENST00000569794 JPH1Q9HDC5 661 aaPredicted RBP10.62□□□□□ -0.71
CHD9-220ENST00000569794 PRSS36Q5K4E3 855 aa10.61□□□□□ -0.71
CHD9-220ENST00000569794 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
CHD9-220ENST00000569794 RAC1P63000 192 aa10.6□□□□□ -0.71
CHD9-220ENST00000569794 IER5Q5VY09 327 aa10.6□□□□□ -0.71
CHD9-220ENST00000569794 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
CHD9-220ENST00000569794 NUDT8Q8WV74 236 aa10.6□□□□□ -0.71
CHD9-220ENST00000569794 GSX2Q9BZM3 304 aa10.6□□□□□ -0.71
CHD9-220ENST00000569794 DNAJB12Q9NXW2 375 aaKnown RBP10.6□□□□□ -0.71
CHD9-220ENST00000569794 RASA1P20936 1047 aa10.59□□□□□ -0.71
CHD9-220ENST00000569794 AFF1P51825 1210 aaKnown RBP10.59□□□□□ -0.71
CHD9-220ENST00000569794 SEC13P55735 322 aa10.59□□□□□ -0.71
CHD9-220ENST00000569794 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
CHD9-220ENST00000569794 NAGPAQ9UK23 515 aa10.59□□□□□ -0.71
CHD9-220ENST00000569794 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
CHD9-220ENST00000569794 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
CHD9-220ENST00000569794 RTN1Q16799 776 aa10.58□□□□□ -0.72
CHD9-220ENST00000569794 ARTNQ5T4W7 220 aa10.58□□□□□ -0.72
CHD9-220ENST00000569794 PSAPL1Q6NUJ1 521 aa10.58□□□□□ -0.72
CHD9-220ENST00000569794 TXNRD3Q86VQ6 643 aa10.58□□□□□ -0.72
CHD9-220ENST00000569794 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.58□□□□□ -0.72
CHD9-220ENST00000569794 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
CHD9-220ENST00000569794 CCINQ13939 588 aa10.57□□□□□ -0.72
CHD9-220ENST00000569794 SHISA2Q6UWI4 295 aa10.57□□□□□ -0.72
CHD9-220ENST00000569794 ILDR2Q71H61 639 aa10.57□□□□□ -0.72
CHD9-220ENST00000569794 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
CHD9-220ENST00000569794 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
CHD9-220ENST00000569794 DMGDHQ9UI17 866 aaKnown RBP10.57□□□□□ -0.72
CHD9-220ENST00000569794 TGFBR3LH3BV60 316 aa10.56□□□□□ -0.72
CHD9-220ENST00000569794 NFKB1P19838 968 aa10.56□□□□□ -0.72
CHD9-220ENST00000569794 BCS1LQ9Y276 419 aa10.56□□□□□ -0.72
CHD9-220ENST00000569794 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
CHD9-220ENST00000569794 FMR1NBQ8N0W7 255 aaPredicted RBP10.55□□□□□ -0.72
CHD9-220ENST00000569794 KRTAP9-2Q9BYQ4 174 aa10.55□□□□□ -0.72
CHD9-220ENST00000569794 ZFP64Q9NPA5 681 aa10.55□□□□□ -0.72
CHD9-220ENST00000569794 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.54□□□□□ -0.72
CHD9-220ENST00000569794 RGS9O75916 674 aaPredicted RBP10.54□□□□□ -0.72
CHD9-220ENST00000569794 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
CHD9-220ENST00000569794 GRNP28799 593 aaKnown RBP10.54□□□□□ -0.72
CHD9-220ENST00000569794 GLMNQ92990 594 aa10.54□□□□□ -0.72
CHD9-220ENST00000569794 DMRTC2Q8IXT2 367 aaPredicted RBP10.53□□□□□ -0.72
CHD9-220ENST00000569794 HINFPQ9BQA5 517 aa10.53□□□□□ -0.72
CHD9-220ENST00000569794 CRTC2Q53ET0 693 aaPredicted RBP10.52□□□□□ -0.73
CHD9-220ENST00000569794 LARP1Q6PKG0 1096 aaKnown RBP10.52□□□□□ -0.73
CHD9-220ENST00000569794 LGR5O75473 907 aa10.51□□□□□ -0.73
CHD9-220ENST00000569794 MAP3K6O95382 1288 aa10.51□□□□□ -0.73
CHD9-220ENST00000569794 IGFBP4P22692 258 aa10.51□□□□□ -0.73
CHD9-220ENST00000569794 PTK7Q13308 1070 aa10.51□□□□□ -0.73
CHD9-220ENST00000569794 FAM35AQ86V20 835 aa10.51□□□□□ -0.73
CHD9-220ENST00000569794 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
CHD9-220ENST00000569794 USP21Q9UK80 565 aa10.51□□□□□ -0.73
CHD9-220ENST00000569794 EPB42P16452 691 aa10.5□□□□□ -0.73
CHD9-220ENST00000569794 INPP5BP32019 993 aa10.5□□□□□ -0.73
CHD9-220ENST00000569794 DPYDQ12882 1025 aa10.5□□□□□ -0.73
CHD9-220ENST00000569794 PCSK7Q16549 785 aa10.5□□□□□ -0.73
CHD9-220ENST00000569794 TP53INP1Q96A56 240 aa10.5□□□□□ -0.73
CHD9-220ENST00000569794 SSBP4Q9BWG4 385 aaPredicted RBP10.5□□□□□ -0.73
CHD9-220ENST00000569794 KRTAP9-6A0A140TA67 174 aa10.49□□□□□ -0.73
CHD9-220ENST00000569794 CPB1P15086 417 aa10.49□□□□□ -0.73
CHD9-220ENST00000569794 MSL1Q68DK7 614 aa10.49□□□□□ -0.73
CHD9-220ENST00000569794 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
CHD9-220ENST00000569794 FRRS1LQ9P0K9 344 aa10.49□□□□□ -0.73
CHD9-220ENST00000569794 ZFATQ9P243 1243 aa10.49□□□□□ -0.73
CHD9-220ENST00000569794 IDH3AP50213 366 aa10.48□□□□□ -0.73
CHD9-220ENST00000569794 GRIK5Q16478 980 aa10.48□□□□□ -0.73
CHD9-220ENST00000569794 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
CHD9-220ENST00000569794 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
CHD9-220ENST00000569794 DTWD1Q8N5C7 304 aa10.48□□□□□ -0.73
CHD9-220ENST00000569794 CLUAP1Q96AJ1 413 aa10.48□□□□□ -0.73
CHD9-220ENST00000569794 LPIN3Q9BQK8 851 aa10.48□□□□□ -0.73
CHD9-220ENST00000569794 ZBTB42B2RXF5 422 aa10.47□□□□□ -0.73
CHD9-220ENST00000569794 LRP8Q14114 963 aa10.47□□□□□ -0.73
CHD9-220ENST00000569794 PERM1Q5SV97 790 aa10.47□□□□□ -0.73
CHD9-220ENST00000569794 FBXO11Q86XK2 927 aa10.47□□□□□ -0.73
CHD9-220ENST00000569794 TRPM4Q8TD43 1214 aa10.47□□□□□ -0.73
CHD9-220ENST00000569794 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.73
CHD9-220ENST00000569794 PPP1R12CQ9BZL4 782 aa10.46□□□□□ -0.73
CHD9-220ENST00000569794 C11orf16Q9NQ32 467 aa10.46□□□□□ -0.73
CHD9-220ENST00000569794 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms