RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 C9orf78Q9NZ63 289 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-213ENST00000569687 CHMP5Q9NZZ3 219 aa6.6□□□□□ -1.35
SF3B3-213ENST00000569687 TTC41PQ6P2S7 1318 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 PCDH11XQ9BZA7 1347 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 PCDH11YQ9BZA8 1340 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 NEURL1BA8MQ27 555 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 APBB1O00213 710 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 MAP3K13O43283 966 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 IL2RBP14784 551 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 CHMLP26374 656 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 DEKP35659 375 aaKnown RBP6.59□□□□□ -1.35
SF3B3-213ENST00000569687 PDE4DQ08499 809 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 GCKRQ14397 625 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 TOM1L2Q6ZVM7 507 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 COPS6Q7L5N1 327 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 TTC5Q8N0Z6 440 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 KAZALD1Q96I82 304 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 USP16Q9Y5T5 823 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 SCN11AQ9UI33 1791 aa6.59□□□□□ -1.35
SF3B3-213ENST00000569687 JCADQ9P266 1359 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 FRAT2O75474 233 aaPredicted RBP6.58□□□□□ -1.36
SF3B3-213ENST00000569687 EVA1CP58658 441 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 ANAPC15P60006 121 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 RIC3Q7Z5B4 369 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 PLBD2Q8NHP8 589 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 XAGE3Q8WTP9 111 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 ESYT1Q9BSJ8 1104 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 PKD1L3Q7Z443 1732 aa6.58□□□□□ -1.36
SF3B3-213ENST00000569687 PARP4Q9UKK3 1724 aaKnown RBP6.57□□□□□ -1.36
SF3B3-213ENST00000569687 H7C1W4 665 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-213ENST00000569687 GLRX3O76003 335 aaKnown RBP6.57□□□□□ -1.36
SF3B3-213ENST00000569687 CWF19L2Q2TBE0 894 aaKnown RBP6.57□□□□□ -1.36
SF3B3-213ENST00000569687 RABL6Q3YEC7 729 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-213ENST00000569687 CLEC17AQ6ZS10 378 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 PI4K2BQ8TCG2 481 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 KIF12Q96FN5 646 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 SUCLG2Q96I99 432 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 ARID3AQ99856 593 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 TEX13AQ9BXU3 409 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-213ENST00000569687 COPRSQ9NQ92 184 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 BTG4Q9NY30 223 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
SF3B3-213ENST00000569687 NRAPQ86VF7 1730 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 NBPF26B4DH59 902 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 SASH1O94885 1247 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 MCM2P49736 904 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 CASP7P55210 303 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 AIMP1Q12904 312 aaKnown RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 MKRN3Q13064 507 aaKnown RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 TRIM28Q13263 835 aaKnown RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 G3BP1Q13283 466 aaKnown RBP eCLIP6.56□□□□□ -1.361e-8■□□□□ 11.1
SF3B3-213ENST00000569687 NBPF14Q5TI25 921 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 NBPF10Q6P3W6 841 aaKnown RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 TICAM2Q86XR7 235 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 NUTM1Q86Y26 1132 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 CLASRPQ8N2M8 674 aaKnown RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 NBPF15Q8N660 670 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 CWC22Q9HCG8 908 aaKnown RBP6.56□□□□□ -1.36
SF3B3-213ENST00000569687 IL1RAPL2Q9NP60 686 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 ECHDC1Q9NTX5 307 aa6.56□□□□□ -1.36
SF3B3-213ENST00000569687 SLIT2O94813 1529 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 SPATA31A6Q5VVP1 1343 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 NUTM2BA6NNL0 878 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-213ENST00000569687 NUTM2EB1AL46 878 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-213ENST00000569687 TRIM6-TRIM34B2RNG4 842 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 ST18O60284 1047 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 CD2BP2O95400 341 aaKnown RBP6.55□□□□□ -1.36
SF3B3-213ENST00000569687 ADAMTS2O95450 1211 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 MYL6BP14649 208 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 MCM4P33991 863 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 RFX5P48382 616 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-213ENST00000569687 UNC5CLQ8IV45 518 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 NUTM2AQ8IVF1 878 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-213ENST00000569687 CNTROBQ8N137 903 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 KCNB2Q92953 911 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 GPATCH3Q96I76 525 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 MYD88Q99836 296 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 BICC1Q9H694 974 aaKnown RBP6.55□□□□□ -1.36
SF3B3-213ENST00000569687 SNRKQ9NRH2 765 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 ATG3Q9NT62 314 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 DISP2A7MBM2 1401 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 TNS2Q63HR2 1409 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 NWD2Q9ULI1 1742 aa6.55□□□□□ -1.36
SF3B3-213ENST00000569687 LRP6O75581 1613 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 SGSM2O43147 1006 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 IFIT2P09913 472 aaKnown RBP6.54□□□□□ -1.36
SF3B3-213ENST00000569687 MCCP23508 829 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 HSPA1LP34931 641 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 HSPA4P34932 840 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-213ENST00000569687 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 EPHA10Q5JZY3 1008 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 CCDC191Q8NCU4 936 aa6.54□□□□□ -1.36
SF3B3-213ENST00000569687 DDX54Q8TDD1 881 aaKnown RBP6.54□□□□□ -1.36
SF3B3-213ENST00000569687 RUFY2Q8WXA3 655 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms