RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PSDA5PKW4 1024 aaPredicted RBP29.58■■■□□ 2.33
RAB40C-212ENST00000569575 PCCAP05165 728 aaPredicted RBP29.58■■■□□ 2.33
RAB40C-212ENST00000569575 UBN2Q6ZU65 1347 aa29.58■■■□□ 2.33
RAB40C-212ENST00000569575 TMEM57Q8N5G2 664 aa29.58■■■□□ 2.33
RAB40C-212ENST00000569575 ZBTB38Q8NAP3 1195 aaPredicted RBP29.58■■■□□ 2.33
RAB40C-212ENST00000569575 AFDNP55196 1824 aaKnown RBP29.57■■■□□ 2.32
RAB40C-212ENST00000569575 UTYO14607 1347 aa29.57■■■□□ 2.32
RAB40C-212ENST00000569575 AAMPQ13685 434 aa29.57■■■□□ 2.32
RAB40C-212ENST00000569575 MVPQ14764 893 aaKnown RBP29.57■■■□□ 2.32
RAB40C-212ENST00000569575 CWF19L2Q2TBE0 894 aaKnown RBP29.57■■■□□ 2.32
RAB40C-212ENST00000569575 NBPF5PQ86XG9 351 aaPredicted RBP29.57■■■□□ 2.32
RAB40C-212ENST00000569575 PDGFDQ9GZP0 370 aaPredicted RBP29.57■■■□□ 2.32
RAB40C-212ENST00000569575 C9orf78Q9NZ63 289 aaPredicted RBP29.57■■■□□ 2.32
RAB40C-212ENST00000569575 GRM8O00222 908 aa29.56■■■□□ 2.32
RAB40C-212ENST00000569575 POLRMTO00411 1230 aaKnown RBP29.56■■■□□ 2.32
RAB40C-212ENST00000569575 SERPINB2P05120 415 aa29.56■■■□□ 2.32
RAB40C-212ENST00000569575 GNAI3P08754 354 aa29.56■■■□□ 2.32
RAB40C-212ENST00000569575 MMP10P09238 476 aa29.56■■■□□ 2.32
RAB40C-212ENST00000569575 BICDL1Q6ZP65 573 aa29.56■■■□□ 2.32
RAB40C-212ENST00000569575 TRMT112Q9UI30 125 aaKnown RBP29.56■■■□□ 2.32
RAB40C-212ENST00000569575 SH3TC1Q8TE82 1336 aa29.55■■■□□ 2.32
RAB40C-212ENST00000569575 H7C1W4 665 aa29.55■■■□□ 2.32
RAB40C-212ENST00000569575 RLBP1P12271 317 aa29.55■■■□□ 2.32
RAB40C-212ENST00000569575 SUSD4Q5VX71 490 aa29.55■■■□□ 2.32
RAB40C-212ENST00000569575 PANK1Q8TE04 598 aa29.55■■■□□ 2.32
RAB40C-212ENST00000569575 CDHR2Q9BYE9 1310 aa29.54■■■□□ 2.32
RAB40C-212ENST00000569575 ITPRIPQ8IWB1 547 aa29.54■■■□□ 2.32
RAB40C-212ENST00000569575 SPON1Q9HCB6 807 aa29.54■■■□□ 2.32
RAB40C-212ENST00000569575 NTSR2O95665 410 aa29.53■■■□□ 2.32
RAB40C-212ENST00000569575 GTF2E1P29083 439 aaPredicted RBP29.53■■■□□ 2.32
RAB40C-212ENST00000569575 SLC10A5Q5PT55 438 aa29.53■■■□□ 2.32
RAB40C-212ENST00000569575 CNBD1Q8NA66 436 aa29.53■■■□□ 2.32
RAB40C-212ENST00000569575 USP44Q9H0E7 712 aa29.53■■■□□ 2.32
RAB40C-212ENST00000569575 NRXN2Q9P2S2 1712 aa29.52■■■□□ 2.32
RAB40C-212ENST00000569575 ZBTB7AO95365 584 aa29.52■■■□□ 2.32
RAB40C-212ENST00000569575 DDR1Q08345 913 aa29.52■■■□□ 2.32
RAB40C-212ENST00000569575 TNNQ9UQP3 1299 aa29.52■■■□□ 2.32
RAB40C-212ENST00000569575 RIC1Q4ADV7 1423 aa29.52■■■□□ 2.32
RAB40C-212ENST00000569575 ST5P78524 1137 aa29.51■■■□□ 2.31
RAB40C-212ENST00000569575 MSL1Q68DK7 614 aa29.51■■■□□ 2.31
RAB40C-212ENST00000569575 PDZRN3Q9UPQ7 1066 aa29.51■■■□□ 2.31
RAB40C-212ENST00000569575 ZBTB7BO15156 539 aaPredicted RBP29.5■■■□□ 2.31
RAB40C-212ENST00000569575 NPHP1O15259 732 aa29.5■■■□□ 2.31
RAB40C-212ENST00000569575 PLA2G12BQ9BX93 195 aa29.49■■■□□ 2.31
RAB40C-212ENST00000569575 COG6Q9Y2V7 657 aa29.49■■■□□ 2.31
RAB40C-212ENST00000569575 UBTFL1P0CB47 393 aaPredicted RBP29.48■■■□□ 2.31
RAB40C-212ENST00000569575 SGIP1Q9BQI5 828 aa29.48■■■□□ 2.31
RAB40C-212ENST00000569575 CASP7P55210 303 aa29.47■■■□□ 2.31
RAB40C-212ENST00000569575 C20orf194Q5TEA3 1177 aa29.47■■■□□ 2.31
RAB40C-212ENST00000569575 PRR5LQ6MZQ0 368 aa29.47■■■□□ 2.31
RAB40C-212ENST00000569575 ATF5Q9Y2D1 282 aaPredicted RBP29.47■■■□□ 2.31
RAB40C-212ENST00000569575 UBE3BQ7Z3V4 1068 aa29.46■■■□□ 2.31
RAB40C-212ENST00000569575 FAM89AQ96GI7 184 aa29.46■■■□□ 2.31
RAB40C-212ENST00000569575 BRIP1Q9BX63 1249 aa29.46■■■□□ 2.31
RAB40C-212ENST00000569575 IRS4O14654 1257 aaPredicted RBP29.45■■■□□ 2.31
RAB40C-212ENST00000569575 PDE8AO60658 829 aa29.44■■■□□ 2.3
RAB40C-212ENST00000569575 NBPF7P0C2Y1 421 aaPredicted RBP29.44■■■□□ 2.3
RAB40C-212ENST00000569575 PTGER2P43116 358 aa29.44■■■□□ 2.3
RAB40C-212ENST00000569575 GNAI2P04899 355 aa29.43■■■□□ 2.3
RAB40C-212ENST00000569575 NEFLP07196 543 aa29.43■■■□□ 2.3
RAB40C-212ENST00000569575 PDE6BP35913 854 aa29.43■■■□□ 2.3
RAB40C-212ENST00000569575 ERFEQ4G0M1 354 aa29.43■■■□□ 2.3
RAB40C-212ENST00000569575 NLRP3Q96P20 1036 aa29.43■■■□□ 2.3
RAB40C-212ENST00000569575 FAM177BA6PVY3 158 aa29.42■■■□□ 2.3
RAB40C-212ENST00000569575 MEIS3Q99687 375 aa29.42■■■□□ 2.3
RAB40C-212ENST00000569575 ZBTB40Q9NUA8 1239 aa29.42■■■□□ 2.3
RAB40C-212ENST00000569575 KLRG2A4D1S0 409 aaPredicted RBP29.41■■■□□ 2.3
RAB40C-212ENST00000569575 LAMB2P55268 1798 aa29.41■■■□□ 2.3
RAB40C-212ENST00000569575 NUTM1Q86Y26 1132 aa29.4■■■□□ 2.3
RAB40C-212ENST00000569575 SF3B3Q15393 1217 aaKnown RBP29.39■■■□□ 2.3
RAB40C-212ENST00000569575 CD2APQ9Y5K6 639 aa29.39■■■□□ 2.3
RAB40C-212ENST00000569575 C10orf71Q711Q0 1435 aa29.37■■■□□ 2.29
RAB40C-212ENST00000569575 CSF1RP07333 972 aa29.37■■■□□ 2.29
RAB40C-212ENST00000569575 RABL6Q3YEC7 729 aaPredicted RBP29.37■■■□□ 2.29
RAB40C-212ENST00000569575 ERICH6BQ5W0A0 696 aa29.37■■■□□ 2.29
RAB40C-212ENST00000569575 CRBNQ96SW2 442 aa29.37■■■□□ 2.29
RAB40C-212ENST00000569575 MYH3P11055 1940 aa29.37■■■□□ 2.29
RAB40C-212ENST00000569575 TGFB2P61812 414 aa29.36■■■□□ 2.29
RAB40C-212ENST00000569575 KIF13BQ9NQT8 1826 aa29.36■■■□□ 2.29
RAB40C-212ENST00000569575 DDX60Q8IY21 1712 aaKnown RBP29.35■■■□□ 2.29
RAB40C-212ENST00000569575 CTSWP56202 376 aa29.35■■■□□ 2.29
RAB40C-212ENST00000569575 MTX1Q13505 466 aa29.35■■■□□ 2.29
RAB40C-212ENST00000569575 CRY2Q49AN0 593 aa29.35■■■□□ 2.29
RAB40C-212ENST00000569575 CCDC152Q4G0S7 254 aa29.35■■■□□ 2.29
RAB40C-212ENST00000569575 RTL5Q5HYW3 569 aaPredicted RBP29.35■■■□□ 2.29
RAB40C-212ENST00000569575 RPAP2Q8IXW5 612 aaPredicted RBP29.35■■■□□ 2.29
RAB40C-212ENST00000569575 SUCLG2Q96I99 432 aa29.35■■■□□ 2.29
RAB40C-212ENST00000569575 RTL9Q8NET4 1388 aa29.35■■■□□ 2.29
RAB40C-212ENST00000569575 HCLS1P14317 486 aaPredicted RBP29.34■■■□□ 2.29
RAB40C-212ENST00000569575 FOXO4P98177 505 aa29.34■■■□□ 2.29
RAB40C-212ENST00000569575 SYNE4Q8N205 404 aa29.34■■■□□ 2.29
RAB40C-212ENST00000569575 ABCC12Q96J65 1359 aa29.34■■■□□ 2.29
RAB40C-212ENST00000569575 TTLL11Q8NHH1 800 aa29.33■■■□□ 2.29
RAB40C-212ENST00000569575 KAZALD1Q96I82 304 aa29.33■■■□□ 2.29
RAB40C-212ENST00000569575 LRRFIP2Q9Y608 721 aaKnown RBP29.33■■■□□ 2.29
RAB40C-212ENST00000569575 H0YIN7 160 aa29.31■■■□□ 2.28
RAB40C-212ENST00000569575 HOXA10P31260 410 aaPredicted RBP29.31■■■□□ 2.28
RAB40C-212ENST00000569575 JARID2Q92833 1246 aaPredicted RBP29.31■■■□□ 2.28
RAB40C-212ENST00000569575 BICC1Q9H694 974 aaKnown RBP29.31■■■□□ 2.28
RAB40C-212ENST00000569575 NPR1P16066 1061 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms