RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 MYD88Q99836 296 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 BRIP1Q9BX63 1249 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 HYPKQ9NX55 129 aa11.62□□□□□ -0.55
GTF3C1-210ENST00000569394 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 C21orf2O43822 256 aa11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 HOXB7P09629 217 aa11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 TTLL6Q8N841 843 aa11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 ABCC12Q96J65 1359 aa11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-210ENST00000569394 IL16Q14005 1332 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 HCLS1P14317 486 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 RASSF7Q02833 373 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 TCIRG1Q13488 830 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 PLBD2Q8NHP8 589 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 UTP14AQ9BVJ6 771 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-210ENST00000569394 TNRC6CQ9HCJ0 1690 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 NTSR2O95665 410 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 IFFO2Q5TF58 517 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 SLC51AQ86UW1 340 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 NLRP10Q86W26 655 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 MAP3K2Q9Y2U5 619 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 ANKRD36CQ5JPF3 1778 aa11.59□□□□□ -0.55
GTF3C1-210ENST00000569394 VAMP4O75379 141 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 SRGNP10124 158 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 HSP90AB3PQ58FF7 597 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 RPGRQ92834 1020 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 FAM89AQ96GI7 184 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 MASTLQ96GX5 879 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 ARFGEF2Q9Y6D5 1785 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
GTF3C1-210ENST00000569394 PI4KAP2A4QPH2 592 aa11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 FKBP5Q13451 457 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 PARP10Q53GL7 1025 aa11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 PI4KAP1Q8N8J0 262 aa11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-210ENST00000569394 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 DDX58O95786 925 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 NPR1P16066 1061 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 C9orf131Q5VYM1 1079 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 CNKSR1Q969H4 720 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 BCL2L13Q9BXK5 485 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 RNF181Q9P0P0 153 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
GTF3C1-210ENST00000569394 CCDC88AQ3V6T2 1871 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 F6X3S4 739 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 CWF19L2Q2TBE0 894 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 SH3TC1Q8TE82 1336 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 ZNF521Q96K83 1311 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 TAF1P21675 1872 aa11.55□□□□□ -0.56
GTF3C1-210ENST00000569394 E9PSI1 815 aa11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 RGL2O15211 777 aa11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 PRELPP51888 382 aa11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 SLFN5Q08AF3 891 aa11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 FLIIQ13045 1269 aa11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 KSR2Q6VAB6 950 aa11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 METTL22Q9BUU2 404 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-210ENST00000569394 IRS4O14654 1257 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 ABCB7O75027 752 aa11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 SLC4A10Q6U841 1118 aa11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 CHMP4AQ9BY43 222 aa11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 ADCY9O60503 1353 aa11.53□□□□□ -0.56
GTF3C1-210ENST00000569394 LAMB2P55268 1798 aa11.52□□□□□ -0.57
GTF3C1-210ENST00000569394 NFKBIEO00221 500 aa11.52□□□□□ -0.57
GTF3C1-210ENST00000569394 ALDH1B1P30837 517 aa11.52□□□□□ -0.57
GTF3C1-210ENST00000569394 NEXNQ0ZGT2 675 aa11.52□□□□□ -0.57
GTF3C1-210ENST00000569394 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 DNAAF4Q8WXU2 420 aa11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 GPBP1L1Q9HC44 474 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 DDX60Q8IY21 1712 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 SBF1O95248 1867 aa11.51□□□□□ -0.57
GTF3C1-210ENST00000569394 CRY2Q49AN0 593 aa11.5□□□□□ -0.57
GTF3C1-210ENST00000569394 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
GTF3C1-210ENST00000569394 DDX46Q7L014 1031 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-210ENST00000569394 SSH1Q8WYL5 1049 aa11.5□□□□□ -0.57
GTF3C1-210ENST00000569394 TAOK3Q9H2K8 898 aa11.5□□□□□ -0.57
GTF3C1-210ENST00000569394 ABCC4O15439 1325 aa11.5□□□□□ -0.57
GTF3C1-210ENST00000569394 IBTKQ9P2D0 1353 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms