RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 MRC1P22897 1456 aa9.58□□□□□ -0.88
SPG7-220ENST00000569363 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
SPG7-220ENST00000569363 GADD45BO75293 160 aaPredicted RBP9.57□□□□□ -0.88
SPG7-220ENST00000569363 TPM3P06753 285 aa9.57□□□□□ -0.88
SPG7-220ENST00000569363 KRT32Q14532 448 aa9.57□□□□□ -0.88
SPG7-220ENST00000569363 PRPF40BQ6NWY9 871 aaKnown RBP9.57□□□□□ -0.88
SPG7-220ENST00000569363 TICAM2Q86XR7 235 aa9.57□□□□□ -0.88
SPG7-220ENST00000569363 MAP4K1Q92918 833 aa9.57□□□□□ -0.88
SPG7-220ENST00000569363 LRRC59Q96AG4 307 aaKnown RBP9.57□□□□□ -0.88
SPG7-220ENST00000569363 MAP7D2Q96T17 732 aa9.57□□□□□ -0.88
SPG7-220ENST00000569363 COL15A1P39059 1388 aa9.57□□□□□ -0.88
SPG7-220ENST00000569363 PXDNQ92626 1479 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 GJB2P29033 226 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 PTH1RQ03431 593 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 CREB3L3Q68CJ9 461 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 SUCLG2Q96I99 432 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.888e-8■■■□□ 14.6
SPG7-220ENST00000569363 CNPY2Q9Y2B0 182 aa9.56□□□□□ -0.88
SPG7-220ENST00000569363 RBM8AQ9Y5S9 174 aaKnown RBP9.56□□□□□ -0.88
SPG7-220ENST00000569363 NPHP4O75161 1426 aaPredicted RBP9.56□□□□□ -0.88
SPG7-220ENST00000569363 RGPD2P0DJD1 1756 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 JCADQ9P266 1359 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 ANXA1P04083 346 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 NMIQ13287 307 aaPredicted RBP9.55□□□□□ -0.88
SPG7-220ENST00000569363 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 ILDR1Q86SU0 546 aaPredicted RBP9.55□□□□□ -0.88
SPG7-220ENST00000569363 CCDC83Q8IWF9 413 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 RNF214Q8ND24 703 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 RAPGEF4Q8WZA2 1011 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 CHAMP1Q96JM3 812 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 FSD1Q9BTV5 496 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.55□□□□□ -0.88
SPG7-220ENST00000569363 MTMR6Q9Y217 621 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 TRPM3Q9HCF6 1732 aaPredicted RBP9.55□□□□□ -0.88
SPG7-220ENST00000569363 ELP1O95163 1332 aa9.55□□□□□ -0.88
SPG7-220ENST00000569363 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 NEURL1BA8MQ27 555 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 SLC27A2O14975 620 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 SASH1O94885 1247 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 TATP17735 454 aaPredicted RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 KRT85P78386 507 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 PROSER3Q2NL68 480 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 SASS6Q6UVJ0 657 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 MTERF4Q7Z6M4 381 aaKnown RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 CHMP4CQ96CF2 233 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 EAF2Q96CJ1 260 aaPredicted RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 BICC1Q9H694 974 aaKnown RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 SLC52A2Q9HAB3 445 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
SPG7-220ENST00000569363 PA2G4Q9UQ80 394 aaKnown RBP9.54□□□□□ -0.88
SPG7-220ENST00000569363 VPS37CA5D8V6 355 aaPredicted RBP9.53□□□□□ -0.88
SPG7-220ENST00000569363 FIBPO43427 364 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 CCDC192P0DO97 292 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 ATP5JP18859 108 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 RPS6KB1P23443 525 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 GCKRQ14397 625 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 PDIA6Q15084 440 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
SPG7-220ENST00000569363 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
SPG7-220ENST00000569363 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
SPG7-220ENST00000569363 SCAND2PQ9GZW5 306 aaPredicted RBP9.53□□□□□ -0.88
SPG7-220ENST00000569363 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
SPG7-220ENST00000569363 R3HCC1Q9Y3T6 440 aaKnown RBP9.53□□□□□ -0.88
SPG7-220ENST00000569363 GOLGA6L6A8MZA4 724 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 DYNC1I1O14576 645 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 KDM4AO75164 1064 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 IGKV5-2P06315 115 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 SNRPA1P09661 255 aaKnown RBP9.52□□□□□ -0.89
SPG7-220ENST00000569363 DSG3P32926 999 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 AIMP1Q12904 312 aaKnown RBP9.52□□□□□ -0.89
SPG7-220ENST00000569363 ME3Q16798 604 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 ADCK5Q3MIX3 580 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 IFNL2Q8IZJ0 200 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 KAZALD1Q96I82 304 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 CCDC8Q9H0W5 538 aaPredicted RBP9.52□□□□□ -0.89
SPG7-220ENST00000569363 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 ERBB3P21860 1342 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 NPHP3Q7Z494 1330 aa9.52□□□□□ -0.89
SPG7-220ENST00000569363 LARGE1O95461 756 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 ADCY5O95622 1261 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 PHKG2P15735 406 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 HMGN5P82970 282 aaKnown RBP9.51□□□□□ -0.89
SPG7-220ENST00000569363 XPCQ01831 940 aaPredicted RBP9.51□□□□□ -0.89
SPG7-220ENST00000569363 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
SPG7-220ENST00000569363 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 LMOD2Q6P5Q4 547 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
SPG7-220ENST00000569363 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 XAGE3Q8WTP9 111 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 PIBF1Q8WXW3 757 aa9.51□□□□□ -0.89
SPG7-220ENST00000569363 PRIMPOLQ96LW4 560 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms