RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
USB1-215ENST00000569252 PI4KAP2A4QPH2 592 aa20.35■□□□□ 0.85
USB1-215ENST00000569252 CAPN15O75808 1086 aa20.35■□□□□ 0.85
USB1-215ENST00000569252 NFIXQ14938 502 aa20.35■□□□□ 0.85
USB1-215ENST00000569252 COL13A1Q5TAT6 717 aaPredicted RBP20.35■□□□□ 0.85
USB1-215ENST00000569252 PI4KAP1Q8N8J0 262 aa20.35■□□□□ 0.85
USB1-215ENST00000569252 API5Q9BZZ5 524 aaKnown RBP20.35■□□□□ 0.85
USB1-215ENST00000569252 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
USB1-215ENST00000569252 RGL2O15211 777 aa20.34■□□□□ 0.85
USB1-215ENST00000569252 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
USB1-215ENST00000569252 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
USB1-215ENST00000569252 ARHGAP45Q92619 1136 aa20.34■□□□□ 0.85
USB1-215ENST00000569252 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
USB1-215ENST00000569252 MS4A1P11836 297 aa20.33■□□□□ 0.85
USB1-215ENST00000569252 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.85
USB1-215ENST00000569252 GIGYF2Q6Y7W6 1299 aaKnown RBP20.33■□□□□ 0.85
USB1-215ENST00000569252 KLRG1Q96E93 195 aa20.33■□□□□ 0.85
USB1-215ENST00000569252 SETDB2Q96T68 719 aa20.33■□□□□ 0.85
USB1-215ENST00000569252 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
USB1-215ENST00000569252 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
USB1-215ENST00000569252 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
USB1-215ENST00000569252 NPHP1O15259 732 aa20.31■□□□□ 0.84
USB1-215ENST00000569252 TCIRG1Q13488 830 aa20.31■□□□□ 0.84
USB1-215ENST00000569252 HLFQ16534 295 aa20.31■□□□□ 0.84
USB1-215ENST00000569252 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
USB1-215ENST00000569252 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
USB1-215ENST00000569252 CACNA1FO60840 1977 aa20.31■□□□□ 0.84
USB1-215ENST00000569252 TNRC6CQ9HCJ0 1690 aaKnown RBP20.31■□□□□ 0.84
USB1-215ENST00000569252 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
USB1-215ENST00000569252 FTSJ3Q8IY81 847 aaKnown RBP20.3■□□□□ 0.84
USB1-215ENST00000569252 MYD88Q99836 296 aa20.3■□□□□ 0.84
USB1-215ENST00000569252 METTL22Q9BUU2 404 aaPredicted RBP20.3■□□□□ 0.84
USB1-215ENST00000569252 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
USB1-215ENST00000569252 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
USB1-215ENST00000569252 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
USB1-215ENST00000569252 ATF7IPQ6VMQ6 1270 aa20.29■□□□□ 0.84
USB1-215ENST00000569252 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
USB1-215ENST00000569252 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
USB1-215ENST00000569252 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
USB1-215ENST00000569252 ANKRD31Q8N7Z5 1873 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 F6X3S4 739 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 SERPINB2P05120 415 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 GPTP24298 496 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 PARP10Q53GL7 1025 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 TBC1D9BQ66K14 1250 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 C2CD5Q86YS7 1000 aa20.27■□□□□ 0.84
USB1-215ENST00000569252 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
USB1-215ENST00000569252 NFKBIEO00221 500 aa20.26■□□□□ 0.83
USB1-215ENST00000569252 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
USB1-215ENST00000569252 FSTL1Q12841 308 aa20.26■□□□□ 0.83
USB1-215ENST00000569252 NYXQ9GZU5 481 aa20.26■□□□□ 0.83
USB1-215ENST00000569252 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
USB1-215ENST00000569252 TPTE2Q6XPS3 522 aa20.25■□□□□ 0.83
USB1-215ENST00000569252 NBPF5PQ86XG9 351 aaPredicted RBP20.25■□□□□ 0.83
USB1-215ENST00000569252 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
USB1-215ENST00000569252 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
USB1-215ENST00000569252 JMYQ8N9B5 988 aa20.25■□□□□ 0.83
USB1-215ENST00000569252 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
USB1-215ENST00000569252 SRCIN1Q9C0H9 1055 aa20.25■□□□□ 0.83
USB1-215ENST00000569252 FAM177BA6PVY3 158 aa20.24■□□□□ 0.83
USB1-215ENST00000569252 TRIM28Q13263 835 aaKnown RBP20.24■□□□□ 0.83
USB1-215ENST00000569252 CCDC191Q8NCU4 936 aa20.24■□□□□ 0.83
USB1-215ENST00000569252 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
USB1-215ENST00000569252 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
USB1-215ENST00000569252 TRIM27P14373 513 aa20.23■□□□□ 0.83
USB1-215ENST00000569252 ISCA1Q9BUE6 129 aa20.23■□□□□ 0.83
USB1-215ENST00000569252 UTP14AQ9BVJ6 771 aaKnown RBP20.23■□□□□ 0.83
USB1-215ENST00000569252 POTECB2RU33 542 aa20.22■□□□□ 0.83
USB1-215ENST00000569252 PLIN1O60240 522 aa20.22■□□□□ 0.83
USB1-215ENST00000569252 ALDH1L1O75891 902 aa20.22■□□□□ 0.83
USB1-215ENST00000569252 HSP90B1P14625 803 aaKnown RBP20.22■□□□□ 0.83
USB1-215ENST00000569252 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
USB1-215ENST00000569252 C9orf78Q9NZ63 289 aaPredicted RBP20.22■□□□□ 0.83
USB1-215ENST00000569252 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
USB1-215ENST00000569252 SUPT16HQ9Y5B9 1047 aaKnown RBP20.22■□□□□ 0.83
USB1-215ENST00000569252 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
USB1-215ENST00000569252 LMNB1P20700 586 aa20.21■□□□□ 0.83
USB1-215ENST00000569252 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
USB1-215ENST00000569252 NLRP10Q86W26 655 aa20.21■□□□□ 0.83
USB1-215ENST00000569252 TTLL6Q8N841 843 aa20.21■□□□□ 0.83
USB1-215ENST00000569252 NEURL1BA8MQ27 555 aa20.2■□□□□ 0.82
USB1-215ENST00000569252 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
USB1-215ENST00000569252 ST5P78524 1137 aa20.2■□□□□ 0.82
USB1-215ENST00000569252 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
USB1-215ENST00000569252 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
USB1-215ENST00000569252 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
USB1-215ENST00000569252 GLTPD2A6NH11 291 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 C21orf2O43822 256 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 POTEIP0CG38 1075 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 POTEJP0CG39 1038 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 SUSD4Q5VX71 490 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 CNBD1Q8NA66 436 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
USB1-215ENST00000569252 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
USB1-215ENST00000569252 H0YIN7 160 aa20.18■□□□□ 0.82
USB1-215ENST00000569252 GCKRQ14397 625 aa20.18■□□□□ 0.82
USB1-215ENST00000569252 INTS3Q68E01 1043 aaKnown RBP20.18■□□□□ 0.82
USB1-215ENST00000569252 ITPRIPQ8IWB1 547 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms