RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CCDC27Q2M243 656 aa10.19□□□□□ -0.78
CDH3-209ENST00000569080 OLFM4Q6UX06 510 aa10.19□□□□□ -0.78
CDH3-209ENST00000569080 NLRP10Q86W26 655 aa10.19□□□□□ -0.78
CDH3-209ENST00000569080 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
CDH3-209ENST00000569080 KDM2BQ8NHM5 1336 aa10.18□□□□□ -0.78
CDH3-209ENST00000569080 GNAI1P63096 354 aa10.18□□□□□ -0.78
CDH3-209ENST00000569080 CALD1Q05682 793 aaKnown RBP10.18□□□□□ -0.78
CDH3-209ENST00000569080 AIMP1Q12904 312 aaKnown RBP10.18□□□□□ -0.78
CDH3-209ENST00000569080 CCDC93Q567U6 631 aa10.18□□□□□ -0.78
CDH3-209ENST00000569080 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
CDH3-209ENST00000569080 MRS2Q9HD23 443 aa10.18□□□□□ -0.78
CDH3-209ENST00000569080 DBF4Q9UBU7 674 aaPredicted RBP10.18□□□□□ -0.78
CDH3-209ENST00000569080 GLTPD2A6NH11 291 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 ANP32CO43423 234 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 TOMM70O94826 608 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 GTF2E1P29083 439 aaPredicted RBP10.17□□□□□ -0.78
CDH3-209ENST00000569080 TCIRG1Q13488 830 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
CDH3-209ENST00000569080 HSP90AB3PQ58FF7 597 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 SLC10A5Q5PT55 438 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 PPP1R42Q7Z4L9 355 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 C8orf58Q8NAV2 365 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 PLBD2Q8NHP8 589 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 ISCA1Q9BUE6 129 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 DUOX1Q9NRD9 1551 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 TAF1P21675 1872 aa10.17□□□□□ -0.78
CDH3-209ENST00000569080 LTBP1Q14766 1721 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 POTECB2RU33 542 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 HSPA6P17066 643 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 FKBP4Q02790 459 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDH3-209ENST00000569080 SYNE4Q8N205 404 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 TSPYL6Q8N831 410 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 TSR2Q969E8 191 aaKnown RBP10.16□□□□□ -0.78
CDH3-209ENST00000569080 CRAMP1Q96RY5 1269 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
CDH3-209ENST00000569080 HYPKQ9NX55 129 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 ADAMTSL1Q8N6G6 1762 aa10.16□□□□□ -0.78
CDH3-209ENST00000569080 ABCC4O15439 1325 aa10.15□□□□□ -0.78
CDH3-209ENST00000569080 IL16Q14005 1332 aa10.15□□□□□ -0.78
CDH3-209ENST00000569080 ALDH1B1P30837 517 aa10.15□□□□□ -0.78
CDH3-209ENST00000569080 RBM46Q8TBY0 533 aaKnown RBP10.15□□□□□ -0.78
CDH3-209ENST00000569080 PHAXQ9H814 394 aaKnown RBP10.15□□□□□ -0.78
CDH3-209ENST00000569080 RRAGCQ9HB90 399 aa10.15□□□□□ -0.78
CDH3-209ENST00000569080 SCN4AP35499 1836 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 PCNTO95613 3336 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 SH3TC1Q8TE82 1336 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 ZNF541Q9H0D2 1346 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 FANCIQ9NVI1 1328 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
CDH3-209ENST00000569080 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
CDH3-209ENST00000569080 TRIM28Q13263 835 aaKnown RBP10.14□□□□□ -0.79
CDH3-209ENST00000569080 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 RTKN2Q8IZC4 609 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 RPGRQ92834 1020 aaKnown RBP10.14□□□□□ -0.79
CDH3-209ENST00000569080 PSMD1Q99460 953 aa10.14□□□□□ -0.79
CDH3-209ENST00000569080 ZNF277Q9NRM2 450 aaPredicted RBP10.14□□□□□ -0.79
CDH3-209ENST00000569080 ATP5J2-PTCD1G3V325 749 aa10.13□□□□□ -0.79
CDH3-209ENST00000569080 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
CDH3-209ENST00000569080 ZNF428Q96B54 188 aa10.13□□□□□ -0.79
CDH3-209ENST00000569080 NLRP3Q96P20 1036 aa10.13□□□□□ -0.79
CDH3-209ENST00000569080 DDNO94850 711 aaPredicted RBP10.12□□□□□ -0.79
CDH3-209ENST00000569080 VEGFAP15692 232 aaPredicted RBP10.12□□□□□ -0.79
CDH3-209ENST00000569080 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
CDH3-209ENST00000569080 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
CDH3-209ENST00000569080 RBM17Q96I25 401 aaKnown RBP10.12□□□□□ -0.79
CDH3-209ENST00000569080 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
CDH3-209ENST00000569080 TRMT112Q9UI30 125 aaKnown RBP10.12□□□□□ -0.79
CDH3-209ENST00000569080 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
CDH3-209ENST00000569080 CACNA1FO60840 1977 aa10.12□□□□□ -0.79
CDH3-209ENST00000569080 ZNF521Q96K83 1311 aa10.11□□□□□ -0.79
CDH3-209ENST00000569080 FZD9O00144 591 aa10.11□□□□□ -0.79
CDH3-209ENST00000569080 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
CDH3-209ENST00000569080 FSTL1Q12841 308 aa10.11□□□□□ -0.79
CDH3-209ENST00000569080 CCDC30Q5VVM6 783 aa10.11□□□□□ -0.79
CDH3-209ENST00000569080 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
CDH3-209ENST00000569080 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
CDH3-209ENST00000569080 MYH3P11055 1940 aa10.1□□□□□ -0.79
CDH3-209ENST00000569080 GRAPQ13588 217 aa10.1□□□□□ -0.79
CDH3-209ENST00000569080 SF3B3Q15393 1217 aaKnown RBP10.1□□□□□ -0.79
CDH3-209ENST00000569080 TWISTNBQ3B726 338 aaPredicted RBP10.1□□□□□ -0.79
CDH3-209ENST00000569080 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
CDH3-209ENST00000569080 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
CDH3-209ENST00000569080 WDR63Q8IWG1 891 aa10.1□□□□□ -0.79
CDH3-209ENST00000569080 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
CDH3-209ENST00000569080 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
CDH3-209ENST00000569080 GRAPLQ8TC17 118 aaPredicted RBP10.1□□□□□ -0.79
CDH3-209ENST00000569080 RTFDC1Q9BY42 306 aaPredicted RBP10.1□□□□□ -0.79
CDH3-209ENST00000569080 IGKV5-2P06315 115 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 APLP1P51693 650 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 G2E3Q7L622 706 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
CDH3-209ENST00000569080 MYD88Q99836 296 aa10.09□□□□□ -0.79
CDH3-209ENST00000569080 METTL22Q9BUU2 404 aaPredicted RBP10.09□□□□□ -0.79
CDH3-209ENST00000569080 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
CDH3-209ENST00000569080 TCERG1O14776 1098 aaKnown RBP10.08□□□□□ -0.8
CDH3-209ENST00000569080 BBOX1O75936 387 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms