RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 TCIRG1Q13488 830 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 C9orf131Q5VYM1 1079 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
NEIL1-220ENST00000568881 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
NEIL1-220ENST00000568881 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 UBN2Q6ZU65 1347 aa17.66■□□□□ 0.42
NEIL1-220ENST00000568881 TNRC6CQ9HCJ0 1690 aaKnown RBP17.65■□□□□ 0.42
NEIL1-220ENST00000568881 LMNB1P20700 586 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 SLC51AQ86UW1 340 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 NLRP3Q96P20 1036 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
NEIL1-220ENST00000568881 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
NEIL1-220ENST00000568881 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
NEIL1-220ENST00000568881 C21orf2O43822 256 aa17.64■□□□□ 0.41
NEIL1-220ENST00000568881 NTSR2O95665 410 aa17.64■□□□□ 0.41
NEIL1-220ENST00000568881 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
NEIL1-220ENST00000568881 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
NEIL1-220ENST00000568881 TMX4Q9H1E5 349 aaPredicted RBP17.64■□□□□ 0.41
NEIL1-220ENST00000568881 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
NEIL1-220ENST00000568881 EXOSC9Q06265 439 aaKnown RBP17.63■□□□□ 0.41
NEIL1-220ENST00000568881 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
NEIL1-220ENST00000568881 NLRP10Q86W26 655 aa17.63■□□□□ 0.41
NEIL1-220ENST00000568881 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
NEIL1-220ENST00000568881 RBM17Q96I25 401 aaKnown RBP17.63■□□□□ 0.41
NEIL1-220ENST00000568881 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
NEIL1-220ENST00000568881 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
NEIL1-220ENST00000568881 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
NEIL1-220ENST00000568881 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
NEIL1-220ENST00000568881 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
NEIL1-220ENST00000568881 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
NEIL1-220ENST00000568881 GRIPAP1Q4V328 841 aa17.61■□□□□ 0.41
NEIL1-220ENST00000568881 CC2D2BQ6DHV5 1058 aa17.61■□□□□ 0.41
NEIL1-220ENST00000568881 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
NEIL1-220ENST00000568881 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
NEIL1-220ENST00000568881 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
NEIL1-220ENST00000568881 LTBP3Q9NS15 1303 aa17.61■□□□□ 0.41
NEIL1-220ENST00000568881 NFKBIEO00221 500 aa17.6■□□□□ 0.41
NEIL1-220ENST00000568881 SLC10A5Q5PT55 438 aa17.6■□□□□ 0.41
NEIL1-220ENST00000568881 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
NEIL1-220ENST00000568881 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
NEIL1-220ENST00000568881 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
NEIL1-220ENST00000568881 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
NEIL1-220ENST00000568881 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
NEIL1-220ENST00000568881 HOXA10P31260 410 aaPredicted RBP17.59■□□□□ 0.41
NEIL1-220ENST00000568881 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
NEIL1-220ENST00000568881 CRAMP1Q96RY5 1269 aa17.59■□□□□ 0.41
NEIL1-220ENST00000568881 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
NEIL1-220ENST00000568881 CACNA1SQ13698 1873 aa17.58■□□□□ 0.41
NEIL1-220ENST00000568881 NEXNQ0ZGT2 675 aa17.58■□□□□ 0.4
NEIL1-220ENST00000568881 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
NEIL1-220ENST00000568881 VAMP4O75379 141 aa17.57■□□□□ 0.4
NEIL1-220ENST00000568881 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
NEIL1-220ENST00000568881 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 KIF3CO14782 793 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
NEIL1-220ENST00000568881 DDX46Q7L014 1031 aaKnown RBP17.56■□□□□ 0.4
NEIL1-220ENST00000568881 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
NEIL1-220ENST00000568881 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 C7orf43Q8WVR3 580 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 MYD88Q99836 296 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 NMRK2Q9NPI5 230 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 SBF1O95248 1867 aa17.56■□□□□ 0.4
NEIL1-220ENST00000568881 FER1L6Q2WGJ9 1857 aa17.55■□□□□ 0.4
NEIL1-220ENST00000568881 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
NEIL1-220ENST00000568881 KSR2Q6VAB6 950 aa17.55■□□□□ 0.4
NEIL1-220ENST00000568881 SYNE4Q8N205 404 aa17.55■□□□□ 0.4
NEIL1-220ENST00000568881 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
NEIL1-220ENST00000568881 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
NEIL1-220ENST00000568881 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
NEIL1-220ENST00000568881 TMC4Q7Z404 712 aa17.54■□□□□ 0.4
NEIL1-220ENST00000568881 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
NEIL1-220ENST00000568881 CWC25Q9NXE8 425 aaPredicted RBP17.54■□□□□ 0.4
NEIL1-220ENST00000568881 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
NEIL1-220ENST00000568881 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
NEIL1-220ENST00000568881 BBOX1O75936 387 aa17.53■□□□□ 0.4
NEIL1-220ENST00000568881 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
NEIL1-220ENST00000568881 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
NEIL1-220ENST00000568881 GLTPD2A6NH11 291 aa17.52■□□□□ 0.4
NEIL1-220ENST00000568881 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.4
NEIL1-220ENST00000568881 FLIIQ13045 1269 aa17.52■□□□□ 0.4
NEIL1-220ENST00000568881 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.4
NEIL1-220ENST00000568881 PSMD1Q99460 953 aa17.52■□□□□ 0.4
NEIL1-220ENST00000568881 CEP350Q5VT06 3117 aa17.51■□□□□ 0.39
NEIL1-220ENST00000568881 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
NEIL1-220ENST00000568881 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
NEIL1-220ENST00000568881 ABCC4O15439 1325 aa17.5■□□□□ 0.39
NEIL1-220ENST00000568881 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
NEIL1-220ENST00000568881 GRAPQ13588 217 aa17.5■□□□□ 0.39
NEIL1-220ENST00000568881 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
NEIL1-220ENST00000568881 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
NEIL1-220ENST00000568881 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
NEIL1-220ENST00000568881 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms