RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 ST5P78524 1137 aa12.85□□□□□ -0.35
PKM-221ENST00000568743 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
PKM-221ENST00000568743 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
PKM-221ENST00000568743 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
PKM-221ENST00000568743 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
PKM-221ENST00000568743 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
PKM-221ENST00000568743 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
PKM-221ENST00000568743 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 AFDNP55196 1824 aaKnown RBP12.84□□□□□ -0.35
PKM-221ENST00000568743 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 TRIM27P14373 513 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 LINS1Q8NG48 757 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 API5Q9BZZ5 524 aaKnown RBP12.84□□□□□ -0.35
PKM-221ENST00000568743 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
PKM-221ENST00000568743 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
PKM-221ENST00000568743 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
PKM-221ENST00000568743 PLIN1O60240 522 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 HCLS1P14317 486 aaPredicted RBP12.83□□□□□ -0.36
PKM-221ENST00000568743 CHRNA5P30532 468 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 GCKRQ14397 625 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 SRCIN1Q9C0H9 1055 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
PKM-221ENST00000568743 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
PKM-221ENST00000568743 DPEP1P16444 411 aa12.82□□□□□ -0.36
PKM-221ENST00000568743 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
PKM-221ENST00000568743 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
PKM-221ENST00000568743 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
PKM-221ENST00000568743 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
PKM-221ENST00000568743 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
PKM-221ENST00000568743 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
PKM-221ENST00000568743 UBE3BQ7Z3V4 1068 aa12.81□□□□□ -0.36
PKM-221ENST00000568743 ABCC4O15439 1325 aa12.81□□□□□ -0.36
PKM-221ENST00000568743 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
PKM-221ENST00000568743 ALDH1L1O75891 902 aa12.8□□□□□ -0.36
PKM-221ENST00000568743 RLBP1P12271 317 aa12.8□□□□□ -0.36
PKM-221ENST00000568743 C2CD5Q86YS7 1000 aa12.8□□□□□ -0.36
PKM-221ENST00000568743 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
PKM-221ENST00000568743 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
PKM-221ENST00000568743 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 H7C1W4 665 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 PDE6BP35913 854 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
PKM-221ENST00000568743 CASP7P55210 303 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 SLC10A5Q5PT55 438 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
PKM-221ENST00000568743 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
PKM-221ENST00000568743 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
PKM-221ENST00000568743 C9orf78Q9NZ63 289 aaPredicted RBP12.79□□□□□ -0.36
PKM-221ENST00000568743 H0YIN7 160 aa12.78□□□□□ -0.36
PKM-221ENST00000568743 GRM8O00222 908 aa12.78□□□□□ -0.36
PKM-221ENST00000568743 KCNA3P22001 575 aa12.78□□□□□ -0.36
PKM-221ENST00000568743 TGFB2P61812 414 aa12.78□□□□□ -0.36
PKM-221ENST00000568743 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
PKM-221ENST00000568743 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
PKM-221ENST00000568743 KIAA1551Q9HCM1 1747 aa12.77□□□□□ -0.36
PKM-221ENST00000568743 N4BP2Q86UW6 1770 aaPredicted RBP12.77□□□□□ -0.36
PKM-221ENST00000568743 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
PKM-221ENST00000568743 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.37
PKM-221ENST00000568743 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
PKM-221ENST00000568743 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
PKM-221ENST00000568743 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.372e-21■□□□□ 10
PKM-221ENST00000568743 NLRP3Q96P20 1036 aa12.77□□□□□ -0.37
PKM-221ENST00000568743 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
PKM-221ENST00000568743 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
PKM-221ENST00000568743 CDHR2Q9BYE9 1310 aa12.77□□□□□ -0.37
PKM-221ENST00000568743 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
PKM-221ENST00000568743 SRGNP10124 158 aa12.76□□□□□ -0.37
PKM-221ENST00000568743 RRP1P56182 461 aaKnown RBP12.76□□□□□ -0.37
PKM-221ENST00000568743 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
PKM-221ENST00000568743 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
PKM-221ENST00000568743 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.76□□□□□ -0.37
PKM-221ENST00000568743 RPGRQ92834 1020 aaKnown RBP12.76□□□□□ -0.37
PKM-221ENST00000568743 MASTLQ96GX5 879 aa12.76□□□□□ -0.37
PKM-221ENST00000568743 SUCLG2Q96I99 432 aa12.76□□□□□ -0.37
PKM-221ENST00000568743 MEIS3Q99687 375 aa12.76□□□□□ -0.37
PKM-221ENST00000568743 COL11A2P13942 1736 aaPredicted RBP12.76□□□□□ -0.37
PKM-221ENST00000568743 UTYO14607 1347 aa12.75□□□□□ -0.37
PKM-221ENST00000568743 PDE8AO60658 829 aa12.75□□□□□ -0.37
PKM-221ENST00000568743 NPR1P16066 1061 aa12.75□□□□□ -0.37
PKM-221ENST00000568743 CTSWP56202 376 aa12.75□□□□□ -0.37
PKM-221ENST00000568743 EPHA10Q5JZY3 1008 aa12.75□□□□□ -0.37
PKM-221ENST00000568743 DDX60Q8IY21 1712 aaKnown RBP12.75□□□□□ -0.37
PKM-221ENST00000568743 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
PKM-221ENST00000568743 FOXO4P98177 505 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 SF3B3Q15393 1217 aaKnown RBP12.74□□□□□ -0.37
PKM-221ENST00000568743 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
PKM-221ENST00000568743 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
PKM-221ENST00000568743 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
PKM-221ENST00000568743 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms