RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ALDH1B1P30837 517 aa38.09■■■■□ 3.69
RAB40C-211ENST00000568586 HOXA10P31260 410 aaPredicted RBP38.09■■■■□ 3.69
RAB40C-211ENST00000568586 NLRP10Q86W26 655 aa38.08■■■■□ 3.69
RAB40C-211ENST00000568586 UTP14AQ9BVJ6 771 aaKnown RBP38.08■■■■□ 3.69
RAB40C-211ENST00000568586 ZNF219Q9P2Y4 722 aaPredicted RBP38.08■■■■□ 3.69
RAB40C-211ENST00000568586 ANKRD13DQ6ZTN6 518 aa38.07■■■■□ 3.68
RAB40C-211ENST00000568586 CHMP4AQ9BY43 222 aa38.06■■■■□ 3.68
RAB40C-211ENST00000568586 ANKRD36CQ5JPF3 1778 aa38.06■■■■□ 3.68
RAB40C-211ENST00000568586 ELL2O00472 640 aaPredicted RBP38.04■■■■□ 3.68
RAB40C-211ENST00000568586 TAOK3Q9H2K8 898 aa38.04■■■■□ 3.68
RAB40C-211ENST00000568586 CCDC93Q567U6 631 aa38.02■■■■□ 3.68
RAB40C-211ENST00000568586 KDM2BQ8NHM5 1336 aa38.02■■■■□ 3.68
RAB40C-211ENST00000568586 CACNA1SQ13698 1873 aa38.02■■■■□ 3.68
RAB40C-211ENST00000568586 ISCA1Q9BUE6 129 aa38.01■■■■□ 3.68
RAB40C-211ENST00000568586 NMRK2Q9NPI5 230 aa38.01■■■■□ 3.68
RAB40C-211ENST00000568586 WDR63Q8IWG1 891 aa38■■■■□ 3.67
RAB40C-211ENST00000568586 TSPYL6Q8N831 410 aa38■■■■□ 3.67
RAB40C-211ENST00000568586 TSR2Q969E8 191 aaKnown RBP38■■■■□ 3.67
RAB40C-211ENST00000568586 CRAMP1Q96RY5 1269 aa38■■■■□ 3.67
RAB40C-211ENST00000568586 SENP3-EIF4A1A0A087X0R7 540 aa37.99■■■■□ 3.67
RAB40C-211ENST00000568586 TRIM28Q13263 835 aaKnown RBP37.99■■■■□ 3.67
RAB40C-211ENST00000568586 C3orf67Q6ZVT6 689 aa37.99■■■■□ 3.67
RAB40C-211ENST00000568586 NLRP3Q96P20 1036 aa37.99■■■■□ 3.67
RAB40C-211ENST00000568586 CCDC88AQ3V6T2 1871 aa37.98■■■■□ 3.67
RAB40C-211ENST00000568586 CCDC30Q5VVM6 783 aa37.98■■■■□ 3.67
RAB40C-211ENST00000568586 RPGRQ92834 1020 aaKnown RBP37.98■■■■□ 3.67
RAB40C-211ENST00000568586 RTKN2Q8IZC4 609 aa37.97■■■■□ 3.67
RAB40C-211ENST00000568586 SNED1Q8TER0 1413 aa37.96■■■■□ 3.67
RAB40C-211ENST00000568586 GLTPD2A6NH11 291 aa37.96■■■■□ 3.67
RAB40C-211ENST00000568586 RBM17Q96I25 401 aaKnown RBP37.96■■■■□ 3.67
RAB40C-211ENST00000568586 PHAXQ9H814 394 aaKnown RBP37.96■■■■□ 3.67
RAB40C-211ENST00000568586 TRMT112Q9UI30 125 aaKnown RBP37.96■■■■□ 3.67
RAB40C-211ENST00000568586 DICER1Q9UPY3 1922 aaKnown RBP37.95■■■■□ 3.67
RAB40C-211ENST00000568586 CC2D2BQ6DHV5 1058 aa37.95■■■■□ 3.67
RAB40C-211ENST00000568586 SH3TC1Q8TE82 1336 aa37.94■■■■□ 3.66
RAB40C-211ENST00000568586 FKBP4Q02790 459 aaKnown RBP eCLIP37.94■■■■□ 3.66
RAB40C-211ENST00000568586 TOMM70O94826 608 aa37.93■■■■□ 3.66
RAB40C-211ENST00000568586 OLFM4Q6UX06 510 aa37.93■■■■□ 3.66
RAB40C-211ENST00000568586 TIAM2Q8IVF5 1701 aa37.92■■■■□ 3.66
RAB40C-211ENST00000568586 FAM9BQ8IZU0 186 aa37.92■■■■□ 3.66
RAB40C-211ENST00000568586 SYNE4Q8N205 404 aa37.92■■■■□ 3.66
RAB40C-211ENST00000568586 GOLGA2Q08379 1002 aa37.91■■■■□ 3.66
RAB40C-211ENST00000568586 GRIPAP1Q4V328 841 aa37.9■■■■□ 3.66
RAB40C-211ENST00000568586 ATP5J2-PTCD1G3V325 749 aa37.89■■■■□ 3.66
RAB40C-211ENST00000568586 HCLS1P14317 486 aaPredicted RBP37.89■■■■□ 3.66
RAB40C-211ENST00000568586 TWISTNBQ3B726 338 aaPredicted RBP37.89■■■■□ 3.66
RAB40C-211ENST00000568586 RIC3Q7Z5B4 369 aa37.89■■■■□ 3.66
RAB40C-211ENST00000568586 PSMD1Q99460 953 aa37.89■■■■□ 3.66
RAB40C-211ENST00000568586 FANCIQ9NVI1 1328 aa37.88■■■■□ 3.66
RAB40C-211ENST00000568586 RRAGCQ9HB90 399 aa37.88■■■■□ 3.65
RAB40C-211ENST00000568586 DPY19L2Q6NUT2 758 aa37.86■■■■□ 3.65
RAB40C-211ENST00000568586 SALL2Q9Y467 1007 aaPredicted RBP37.86■■■■□ 3.65
RAB40C-211ENST00000568586 CEP350Q5VT06 3117 aa37.85■■■■□ 3.65
RAB40C-211ENST00000568586 PPEF1O14829 653 aaPredicted RBP37.84■■■■□ 3.65
RAB40C-211ENST00000568586 DDX58O95786 925 aaKnown RBP37.84■■■■□ 3.65
RAB40C-211ENST00000568586 RBM46Q8TBY0 533 aaKnown RBP37.84■■■■□ 3.65
RAB40C-211ENST00000568586 FAM89AQ96GI7 184 aa37.83■■■■□ 3.65
RAB40C-211ENST00000568586 ZNF277Q9NRM2 450 aaPredicted RBP37.83■■■■□ 3.65
RAB40C-211ENST00000568586 ABCC4O15439 1325 aa37.83■■■■□ 3.65
RAB40C-211ENST00000568586 LAMB2P55268 1798 aa37.83■■■■□ 3.65
RAB40C-211ENST00000568586 BBOX1O75936 387 aa37.82■■■■□ 3.64
RAB40C-211ENST00000568586 VEGFAP15692 232 aaPredicted RBP37.82■■■■□ 3.64
RAB40C-211ENST00000568586 METTL22Q9BUU2 404 aaPredicted RBP37.82■■■■□ 3.64
RAB40C-211ENST00000568586 STK31Q9BXU1 1019 aa37.82■■■■□ 3.64
RAB40C-211ENST00000568586 ATP6V0A2Q9Y487 856 aa37.82■■■■□ 3.64
RAB40C-211ENST00000568586 POTECB2RU33 542 aa37.8■■■■□ 3.64
RAB40C-211ENST00000568586 HSPA6P17066 643 aa37.8■■■■□ 3.64
RAB40C-211ENST00000568586 SF3B3Q15393 1217 aaKnown RBP37.8■■■■□ 3.64
RAB40C-211ENST00000568586 CCDC191Q8NCU4 936 aa37.8■■■■□ 3.64
RAB40C-211ENST00000568586 SPINK5Q9NQ38 1064 aaPredicted RBP37.8■■■■□ 3.64
RAB40C-211ENST00000568586 WDR90Q96KV7 1748 aa37.79■■■■□ 3.64
RAB40C-211ENST00000568586 IARSP41252 1262 aaKnown RBP37.79■■■■□ 3.64
RAB40C-211ENST00000568586 KSR2Q6VAB6 950 aa37.79■■■■□ 3.64
RAB40C-211ENST00000568586 ZBTB38Q8NAP3 1195 aaPredicted RBP37.79■■■■□ 3.64
RAB40C-211ENST00000568586 DDX60Q8IY21 1712 aaKnown RBP37.78■■■■□ 3.64
RAB40C-211ENST00000568586 VAMP4O75379 141 aa37.78■■■■□ 3.64
RAB40C-211ENST00000568586 DDX46Q7L014 1031 aaKnown RBP37.78■■■■□ 3.64
RAB40C-211ENST00000568586 C16orf71Q8IYS4 520 aaPredicted RBP37.78■■■■□ 3.64
RAB40C-211ENST00000568586 MYD88Q99836 296 aa37.78■■■■□ 3.64
RAB40C-211ENST00000568586 ZNF521Q96K83 1311 aa37.78■■■■□ 3.64
RAB40C-211ENST00000568586 SLC4A2P04920 1241 aa37.76■■■■□ 3.64
RAB40C-211ENST00000568586 SP8Q8IXZ3 490 aa37.76■■■■□ 3.64
RAB40C-211ENST00000568586 ZNF428Q96B54 188 aa37.76■■■■□ 3.64
RAB40C-211ENST00000568586 MAP3K2Q9Y2U5 619 aa37.76■■■■□ 3.64
RAB40C-211ENST00000568586 PI4KAP2A4QPH2 592 aa37.75■■■■□ 3.63
RAB40C-211ENST00000568586 EXOSC9Q06265 439 aaKnown RBP37.75■■■■□ 3.63
RAB40C-211ENST00000568586 GRAPQ13588 217 aa37.75■■■■□ 3.63
RAB40C-211ENST00000568586 SLC51AQ86UW1 340 aa37.75■■■■□ 3.63
RAB40C-211ENST00000568586 PI4KAP1Q8N8J0 262 aa37.75■■■■□ 3.63
RAB40C-211ENST00000568586 GRAPLQ8TC17 118 aaPredicted RBP37.75■■■■□ 3.63
RAB40C-211ENST00000568586 FZD9O00144 591 aa37.74■■■■□ 3.63
RAB40C-211ENST00000568586 IRS4O14654 1257 aaPredicted RBP37.74■■■■□ 3.63
RAB40C-211ENST00000568586 FSTL1Q12841 308 aa37.74■■■■□ 3.63
RAB40C-211ENST00000568586 MYH16Q9H6N6 1097 aa37.74■■■■□ 3.63
RAB40C-211ENST00000568586 TCERG1O14776 1098 aaKnown RBP37.73■■■■□ 3.63
RAB40C-211ENST00000568586 PCCAP05165 728 aaPredicted RBP37.73■■■■□ 3.63
RAB40C-211ENST00000568586 G2E3Q7L622 706 aa37.73■■■■□ 3.63
RAB40C-211ENST00000568586 TMC4Q7Z404 712 aa37.73■■■■□ 3.63
RAB40C-211ENST00000568586 CWC25Q9NXE8 425 aaPredicted RBP37.73■■■■□ 3.63
RAB40C-211ENST00000568586 DDNO94850 711 aaPredicted RBP37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms