RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 APAF1O14727 1248 aa19.46■□□□□ 0.71
CCNDBP1-213ENST00000568507 DDNO94850 711 aaPredicted RBP19.46■□□□□ 0.71
CCNDBP1-213ENST00000568507 HOXA10P31260 410 aaPredicted RBP19.46■□□□□ 0.71
CCNDBP1-213ENST00000568507 CC2D2BQ6DHV5 1058 aa19.46■□□□□ 0.71
CCNDBP1-213ENST00000568507 CHPF2Q9P2E5 772 aa19.46■□□□□ 0.71
CCNDBP1-213ENST00000568507 FER1L6Q2WGJ9 1857 aa19.46■□□□□ 0.71
CCNDBP1-213ENST00000568507 POTECB2RU33 542 aa19.45■□□□□ 0.7
CCNDBP1-213ENST00000568507 HOXB7P09629 217 aa19.45■□□□□ 0.7
CCNDBP1-213ENST00000568507 CALD1Q05682 793 aaKnown RBP19.45■□□□□ 0.7
CCNDBP1-213ENST00000568507 TMX4Q9H1E5 349 aaPredicted RBP19.45■□□□□ 0.7
CCNDBP1-213ENST00000568507 CRAMP1Q96RY5 1269 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 TIAM2Q8IVF5 1701 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 RIC1Q4ADV7 1423 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 IARSP41252 1262 aaKnown RBP19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 TCIRG1Q13488 830 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 SLC10A5Q5PT55 438 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 NLRP10Q86W26 655 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 DNAJC5GQ8N7S2 189 aa19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 DBF4Q9UBU7 674 aaPredicted RBP19.44■□□□□ 0.7
CCNDBP1-213ENST00000568507 NUP98P52948 1817 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 GNAI1P63096 354 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 HTRA3P83110 453 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 DUSP27Q5VZP5 1158 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 JDP2Q8WYK2 163 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 PSMD1Q99460 953 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 MBIPQ9NS73 344 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 TRMT112Q9UI30 125 aaKnown RBP19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
CCNDBP1-213ENST00000568507 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 CACNA1SQ13698 1873 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 IQCA1LA6NCM1 817 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 C3orf67Q6ZVT6 689 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 IFT57Q9NWB7 429 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 HYPKQ9NX55 129 aa19.42■□□□□ 0.7
CCNDBP1-213ENST00000568507 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
CCNDBP1-213ENST00000568507 ZNF853P0CG23 659 aa19.4■□□□□ 0.7
CCNDBP1-213ENST00000568507 HCLS1P14317 486 aaPredicted RBP19.4■□□□□ 0.7
CCNDBP1-213ENST00000568507 WDR90Q96KV7 1748 aa19.4■□□□□ 0.7
CCNDBP1-213ENST00000568507 SH3TC1Q8TE82 1336 aa19.39■□□□□ 0.69
CCNDBP1-213ENST00000568507 ZNF541Q9H0D2 1346 aa19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 FZD9O00144 591 aa19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 ELL2O00472 640 aaPredicted RBP19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 CHADLQ6NUI6 762 aa19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 DDX46Q7L014 1031 aaKnown RBP19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 L3MBTL3Q96JM7 780 aaPredicted RBP19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 DICER1Q9UPY3 1922 aaKnown RBP19.38■□□□□ 0.69
CCNDBP1-213ENST00000568507 BBOX1O75936 387 aa19.37■□□□□ 0.69
CCNDBP1-213ENST00000568507 EIF6P56537 245 aaKnown RBP19.37■□□□□ 0.69
CCNDBP1-213ENST00000568507 LARGE2Q8N3Y3 721 aa19.37■□□□□ 0.69
CCNDBP1-213ENST00000568507 CHMP4AQ9BY43 222 aa19.37■□□□□ 0.69
CCNDBP1-213ENST00000568507 ATP6V0A2Q9Y487 856 aa19.37■□□□□ 0.69
CCNDBP1-213ENST00000568507 ATP5J2-PTCD1G3V325 749 aa19.36■□□□□ 0.69
CCNDBP1-213ENST00000568507 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
CCNDBP1-213ENST00000568507 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
CCNDBP1-213ENST00000568507 HACL1Q9UJ83 578 aa19.36■□□□□ 0.69
CCNDBP1-213ENST00000568507 ABCC4O15439 1325 aa19.35■□□□□ 0.69
CCNDBP1-213ENST00000568507 GOLGA2Q08379 1002 aa19.35■□□□□ 0.69
CCNDBP1-213ENST00000568507 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
CCNDBP1-213ENST00000568507 GPC2Q8N158 579 aa19.35■□□□□ 0.69
CCNDBP1-213ENST00000568507 ISCA1Q9BUE6 129 aa19.35■□□□□ 0.69
CCNDBP1-213ENST00000568507 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 POTEIP0CG38 1075 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 POTEJP0CG39 1038 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 CCDC184Q52MB2 194 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 EAPPQ56P03 285 aaPredicted RBP19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 SUPT20HQ8NEM7 779 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 GJA3Q9Y6H8 435 aa19.34■□□□□ 0.69
CCNDBP1-213ENST00000568507 ANP32CO43423 234 aa19.33■□□□□ 0.69
CCNDBP1-213ENST00000568507 SP8Q8IXZ3 490 aa19.33■□□□□ 0.69
CCNDBP1-213ENST00000568507 SNED1Q8TER0 1413 aa19.33■□□□□ 0.69
CCNDBP1-213ENST00000568507 PPIP5K2O43314 1243 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 EPHX2P34913 555 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 GRAPQ13588 217 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 SLC51AQ86UW1 340 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 PNMA8AQ86V59 439 aaPredicted RBP19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 NIM1KQ8IY84 436 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 GRAPLQ8TC17 118 aaPredicted RBP19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 TRIM28Q13263 835 aaKnown RBP19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 MPNDQ8N594 471 aa19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 PHAXQ9H814 394 aaKnown RBP19.32■□□□□ 0.68
CCNDBP1-213ENST00000568507 LMOD1P29536 600 aaPredicted RBP19.31■□□□□ 0.68
CCNDBP1-213ENST00000568507 AOC3Q16853 763 aa19.31■□□□□ 0.68
CCNDBP1-213ENST00000568507 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
CCNDBP1-213ENST00000568507 TMC4Q7Z404 712 aa19.31■□□□□ 0.68
CCNDBP1-213ENST00000568507 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
CCNDBP1-213ENST00000568507 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
CCNDBP1-213ENST00000568507 DDX58O95786 925 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms