RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
KNOP1-205ENST00000568230 C21orf2O43822 256 aa22.09■■□□□ 1.13
KNOP1-205ENST00000568230 RASSF7Q02833 373 aa22.09■■□□□ 1.13
KNOP1-205ENST00000568230 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
KNOP1-205ENST00000568230 TWISTNBQ3B726 338 aaPredicted RBP22.07■■□□□ 1.12
KNOP1-205ENST00000568230 SOGA3Q5TF21 947 aa22.07■■□□□ 1.12
KNOP1-205ENST00000568230 C7orf43Q8WVR3 580 aa22.07■■□□□ 1.12
KNOP1-205ENST00000568230 ISCA1Q9BUE6 129 aa22.07■■□□□ 1.12
KNOP1-205ENST00000568230 PHAXQ9H814 394 aaKnown RBP22.07■■□□□ 1.12
KNOP1-205ENST00000568230 RNF181Q9P0P0 153 aa22.07■■□□□ 1.12
KNOP1-205ENST00000568230 ZNF521Q96K83 1311 aa22.07■■□□□ 1.12
KNOP1-205ENST00000568230 LMNB1P20700 586 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 HOXA10P31260 410 aaPredicted RBP22.06■■□□□ 1.12
KNOP1-205ENST00000568230 PRELPP51888 382 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 SLC10A5Q5PT55 438 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 GPBP1L1Q9HC44 474 aaPredicted RBP22.06■■□□□ 1.12
KNOP1-205ENST00000568230 LTBP3Q9NS15 1303 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 TIAM2Q8IVF5 1701 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 ALDH1B1P30837 517 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
KNOP1-205ENST00000568230 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
KNOP1-205ENST00000568230 ZNF219Q9P2Y4 722 aaPredicted RBP22.06■■□□□ 1.12
KNOP1-205ENST00000568230 CCDC88AQ3V6T2 1871 aa22.05■■□□□ 1.12
KNOP1-205ENST00000568230 LAMB2P55268 1798 aa22.05■■□□□ 1.12
KNOP1-205ENST00000568230 ZC3H4Q9UPT8 1303 aaKnown RBP22.05■■□□□ 1.12
KNOP1-205ENST00000568230 TRIM28Q13263 835 aaKnown RBP22.05■■□□□ 1.12
KNOP1-205ENST00000568230 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
KNOP1-205ENST00000568230 ZNF526Q8TF50 670 aaPredicted RBP22.04■■□□□ 1.12
KNOP1-205ENST00000568230 RPGRQ92834 1020 aaKnown RBP22.04■■□□□ 1.12
KNOP1-205ENST00000568230 STK31Q9BXU1 1019 aa22.04■■□□□ 1.12
KNOP1-205ENST00000568230 MYH16Q9H6N6 1097 aa22.04■■□□□ 1.12
KNOP1-205ENST00000568230 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
KNOP1-205ENST00000568230 CACNA1FO60840 1977 aa22.03■■□□□ 1.12
KNOP1-205ENST00000568230 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
KNOP1-205ENST00000568230 DICER1Q9UPY3 1922 aaKnown RBP22.03■■□□□ 1.12
KNOP1-205ENST00000568230 ATP5J2-PTCD1G3V325 749 aa22.03■■□□□ 1.12
KNOP1-205ENST00000568230 CCDC93Q567U6 631 aa22.03■■□□□ 1.12
KNOP1-205ENST00000568230 RIC3Q7Z5B4 369 aa22.03■■□□□ 1.12
KNOP1-205ENST00000568230 NLRP3Q96P20 1036 aa22.03■■□□□ 1.12
KNOP1-205ENST00000568230 TAOK3Q9H2K8 898 aa22.03■■□□□ 1.12
KNOP1-205ENST00000568230 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
KNOP1-205ENST00000568230 DDX58O95786 925 aaKnown RBP22.02■■□□□ 1.12
KNOP1-205ENST00000568230 EXOSC9Q06265 439 aaKnown RBP22.01■■□□□ 1.11
KNOP1-205ENST00000568230 SYNE4Q8N205 404 aa22.01■■□□□ 1.11
KNOP1-205ENST00000568230 CRAMP1Q96RY5 1269 aa22.01■■□□□ 1.11
KNOP1-205ENST00000568230 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
KNOP1-205ENST00000568230 RBM17Q96I25 401 aaKnown RBP22■■□□□ 1.11
KNOP1-205ENST00000568230 TCERG1O14776 1098 aaKnown RBP21.99■■□□□ 1.11
KNOP1-205ENST00000568230 VAMP4O75379 141 aa21.99■■□□□ 1.11
KNOP1-205ENST00000568230 OLFM4Q6UX06 510 aa21.99■■□□□ 1.11
KNOP1-205ENST00000568230 METTL22Q9BUU2 404 aaPredicted RBP21.99■■□□□ 1.11
KNOP1-205ENST00000568230 SLC4A2P04920 1241 aa21.98■■□□□ 1.11
KNOP1-205ENST00000568230 KSR2Q6VAB6 950 aa21.98■■□□□ 1.11
KNOP1-205ENST00000568230 MYD88Q99836 296 aa21.98■■□□□ 1.11
KNOP1-205ENST00000568230 CC2D2BQ6DHV5 1058 aa21.97■■□□□ 1.11
KNOP1-205ENST00000568230 G2E3Q7L622 706 aa21.97■■□□□ 1.11
KNOP1-205ENST00000568230 RTKN2Q8IZC4 609 aa21.97■■□□□ 1.11
KNOP1-205ENST00000568230 ZNF428Q96B54 188 aa21.97■■□□□ 1.11
KNOP1-205ENST00000568230 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
KNOP1-205ENST00000568230 MAP3K2Q9Y2U5 619 aa21.97■■□□□ 1.11
KNOP1-205ENST00000568230 ABCC4O15439 1325 aa21.96■■□□□ 1.11
KNOP1-205ENST00000568230 PI4KAP2A4QPH2 592 aa21.96■■□□□ 1.11
KNOP1-205ENST00000568230 KIF3CO14782 793 aa21.96■■□□□ 1.11
KNOP1-205ENST00000568230 C1QTNF8P60827 252 aa21.96■■□□□ 1.11
KNOP1-205ENST00000568230 FKBP4Q02790 459 aaKnown RBP eCLIP21.96■■□□□ 1.11
KNOP1-205ENST00000568230 PI4KAP1Q8N8J0 262 aa21.96■■□□□ 1.11
KNOP1-205ENST00000568230 CCDC191Q8NCU4 936 aa21.96■■□□□ 1.11
KNOP1-205ENST00000568230 KDM2BQ8NHM5 1336 aa21.95■■□□□ 1.11
KNOP1-205ENST00000568230 PPEF1O14829 653 aaPredicted RBP21.95■■□□□ 1.1
KNOP1-205ENST00000568230 FLIIQ13045 1269 aa21.95■■□□□ 1.1
KNOP1-205ENST00000568230 ZBTB38Q8NAP3 1195 aaPredicted RBP21.95■■□□□ 1.1
KNOP1-205ENST00000568230 NMRK2Q9NPI5 230 aa21.94■■□□□ 1.1
KNOP1-205ENST00000568230 CWC25Q9NXE8 425 aaPredicted RBP21.94■■□□□ 1.1
KNOP1-205ENST00000568230 IRS4O14654 1257 aaPredicted RBP21.93■■□□□ 1.1
KNOP1-205ENST00000568230 GRIPAP1Q4V328 841 aa21.93■■□□□ 1.1
KNOP1-205ENST00000568230 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
KNOP1-205ENST00000568230 PSMD1Q99460 953 aa21.93■■□□□ 1.1
KNOP1-205ENST00000568230 CEP350Q5VT06 3117 aa21.92■■□□□ 1.1
KNOP1-205ENST00000568230 E9PSI1 815 aa21.92■■□□□ 1.1
KNOP1-205ENST00000568230 IGKV5-2P06315 115 aa21.92■■□□□ 1.1
KNOP1-205ENST00000568230 SF3B3Q15393 1217 aaKnown RBP21.92■■□□□ 1.1
KNOP1-205ENST00000568230 RTL5Q5HYW3 569 aaPredicted RBP21.92■■□□□ 1.1
KNOP1-205ENST00000568230 DDX46Q7L014 1031 aaKnown RBP21.92■■□□□ 1.1
KNOP1-205ENST00000568230 SLC51AQ86UW1 340 aa21.92■■□□□ 1.1
KNOP1-205ENST00000568230 LRRC37AA6NMS7 1700 aa21.91■■□□□ 1.1
KNOP1-205ENST00000568230 GLTPD2A6NH11 291 aa21.91■■□□□ 1.1
KNOP1-205ENST00000568230 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
KNOP1-205ENST00000568230 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
KNOP1-205ENST00000568230 ATP6V0A2Q9Y487 856 aa21.91■■□□□ 1.1
KNOP1-205ENST00000568230 TAF1P21675 1872 aa21.91■■□□□ 1.1
KNOP1-205ENST00000568230 BBOX1O75936 387 aa21.9■■□□□ 1.1
KNOP1-205ENST00000568230 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
KNOP1-205ENST00000568230 NEXNQ0ZGT2 675 aa21.9■■□□□ 1.1
KNOP1-205ENST00000568230 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
KNOP1-205ENST00000568230 GRAPQ13588 217 aa21.9■■□□□ 1.1
KNOP1-205ENST00000568230 GRAPLQ8TC17 118 aaPredicted RBP21.9■■□□□ 1.1
KNOP1-205ENST00000568230 WDR90Q96KV7 1748 aa21.88■■□□□ 1.09
KNOP1-205ENST00000568230 NEURL1BA8MQ27 555 aa21.88■■□□□ 1.09
KNOP1-205ENST00000568230 SLFN5Q08AF3 891 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms