RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 NMIQ13287 307 aaPredicted RBP12.71□□□□□ -0.38
PALB2-206ENST00000568219 VPS53Q5VIR6 699 aa12.71□□□□□ -0.38
PALB2-206ENST00000568219 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.38
PALB2-206ENST00000568219 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 CAPN2P17655 700 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 GTF2A1P52655 376 aaPredicted RBP12.7□□□□□ -0.38
PALB2-206ENST00000568219 GYS2P54840 703 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 CLSTN2Q9H4D0 955 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 H0YHG0 523 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 EVCP57679 992 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 ABCC10Q5T3U5 1492 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
PALB2-206ENST00000568219 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
PALB2-206ENST00000568219 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 RASSF4Q9H2L5 321 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
PALB2-206ENST00000568219 HIP1O00291 1037 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 CCP110O43303 1012 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
PALB2-206ENST00000568219 VPS18Q9P253 973 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 CHL1O00533 1208 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
PALB2-206ENST00000568219 MYL6BP14649 208 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 UBASH3AP57075 661 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 Q6ZUG5 572 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 TXLNBQ8N3L3 684 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
PALB2-206ENST00000568219 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 IL25Q9H293 177 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
PALB2-206ENST00000568219 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 JAKMIP3Q5VZ66 844 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
PALB2-206ENST00000568219 CTAGE5O15320 804 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 MARCKSP29966 332 aaPredicted RBP12.68□□□□□ -0.38
PALB2-206ENST00000568219 KLHL10Q6JEL2 608 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 EPC1Q9H2F5 836 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
PALB2-206ENST00000568219 ANKRD65E5RJM6 399 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 ANKRD7Q92527 254 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 DUOX2Q9NRD8 1548 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 TRIM29Q14134 588 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
PALB2-206ENST00000568219 C11orf57Q6ZUT1 292 aaPredicted RBP12.68□□□□□ -0.38
PALB2-206ENST00000568219 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
PALB2-206ENST00000568219 TPM1P09493 284 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
PALB2-206ENST00000568219 EDC3Q96F86 508 aaKnown RBP12.67□□□□□ -0.38
PALB2-206ENST00000568219 NCOA5Q9HCD5 579 aaKnown RBP12.67□□□□□ -0.38
PALB2-206ENST00000568219 ADGBQ8N7X0 1667 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 RGS12O14924 1447 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 OAS2P29728 719 aaKnown RBP12.67□□□□□ -0.38
PALB2-206ENST00000568219 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 GOLGA8DPQ0D2H9 430 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 TMEM51Q9NW97 253 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 ZSCAN12O43309 604 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
PALB2-206ENST00000568219 ZSCAN26Q16670 478 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 ERC1Q8IUD2 1116 aa12.67□□□□□ -0.38
PALB2-206ENST00000568219 SRRTQ9BXP5 876 aaKnown RBP12.67□□□□□ -0.38
PALB2-206ENST00000568219 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 CAVIN2O95810 425 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 SLFN14P0C7P3 912 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.66□□□□□ -0.38
PALB2-206ENST00000568219 CCDC82Q8N4S0 544 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 XPO4Q9C0E2 1151 aaKnown RBP12.66□□□□□ -0.38
PALB2-206ENST00000568219 LZTFL1Q9NQ48 299 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 HAND2P61296 217 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
PALB2-206ENST00000568219 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
PALB2-206ENST00000568219 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
PALB2-206ENST00000568219 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 C1orf141Q5JVX7 400 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 USP44Q9H0E7 712 aa12.66□□□□□ -0.38
PALB2-206ENST00000568219 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
PALB2-206ENST00000568219 RHOXF2BP0C7M4 288 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
PALB2-206ENST00000568219 APOBRQ0VD83 1088 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
PALB2-206ENST00000568219 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 RHOXF2Q9BQY4 288 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 OSBPL3Q9H4L5 887 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 CHPF2Q9P2E5 772 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.65□□□□□ -0.38
PALB2-206ENST00000568219 ERLIN1O75477 346 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 CLCN6P51797 869 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 KRT32Q14532 448 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 PPFIBP1Q86W92 1011 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
PALB2-206ENST00000568219 PATL2C9JE40 543 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms