RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
CNOT1-213ENST00000568158 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
CNOT1-213ENST00000568158 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
CNOT1-213ENST00000568158 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
CNOT1-213ENST00000568158 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
CNOT1-213ENST00000568158 KSR2Q6VAB6 950 aa16.68■□□□□ 0.26
CNOT1-213ENST00000568158 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
CNOT1-213ENST00000568158 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
CNOT1-213ENST00000568158 DALRD3Q5D0E6 543 aaKnown RBP16.67■□□□□ 0.26
CNOT1-213ENST00000568158 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
CNOT1-213ENST00000568158 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
CNOT1-213ENST00000568158 SRGNP10124 158 aa16.66■□□□□ 0.26
CNOT1-213ENST00000568158 FLIIQ13045 1269 aa16.66■□□□□ 0.26
CNOT1-213ENST00000568158 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
CNOT1-213ENST00000568158 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
CNOT1-213ENST00000568158 ABCC12Q96J65 1359 aa16.65■□□□□ 0.26
CNOT1-213ENST00000568158 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
CNOT1-213ENST00000568158 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
CNOT1-213ENST00000568158 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
CNOT1-213ENST00000568158 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
CNOT1-213ENST00000568158 ARHGAP27Q6ZUM4 889 aa16.65■□□□□ 0.26
CNOT1-213ENST00000568158 ADCY9O60503 1353 aa16.64■□□□□ 0.26
CNOT1-213ENST00000568158 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
CNOT1-213ENST00000568158 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-213ENST00000568158 FKBP5Q13451 457 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-213ENST00000568158 C3orf67Q6ZVT6 689 aa16.64■□□□□ 0.25
CNOT1-213ENST00000568158 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-213ENST00000568158 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
CNOT1-213ENST00000568158 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
CNOT1-213ENST00000568158 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
CNOT1-213ENST00000568158 BRCA1P38398 1863 aaKnown RBP16.64■□□□□ 0.25
CNOT1-213ENST00000568158 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
CNOT1-213ENST00000568158 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
CNOT1-213ENST00000568158 IGKV5-2P06315 115 aa16.63■□□□□ 0.25
CNOT1-213ENST00000568158 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
CNOT1-213ENST00000568158 MRPL50Q8N5N7 158 aaKnown RBP16.63■□□□□ 0.25
CNOT1-213ENST00000568158 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
CNOT1-213ENST00000568158 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
CNOT1-213ENST00000568158 F6X3S4 739 aa16.62■□□□□ 0.25
CNOT1-213ENST00000568158 NPR1P16066 1061 aa16.62■□□□□ 0.25
CNOT1-213ENST00000568158 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
CNOT1-213ENST00000568158 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
CNOT1-213ENST00000568158 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
CNOT1-213ENST00000568158 CWF19L2Q2TBE0 894 aaKnown RBP16.61■□□□□ 0.25
CNOT1-213ENST00000568158 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
CNOT1-213ENST00000568158 DNAAF4Q8WXU2 420 aa16.61■□□□□ 0.25
CNOT1-213ENST00000568158 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
CNOT1-213ENST00000568158 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-213ENST00000568158 C21orf2O43822 256 aa16.6■□□□□ 0.25
CNOT1-213ENST00000568158 YY1P25490 414 aa16.6■□□□□ 0.25
CNOT1-213ENST00000568158 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
CNOT1-213ENST00000568158 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
CNOT1-213ENST00000568158 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
CNOT1-213ENST00000568158 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
CNOT1-213ENST00000568158 CHD4Q14839 1912 aa16.59■□□□□ 0.25
CNOT1-213ENST00000568158 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
CNOT1-213ENST00000568158 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
CNOT1-213ENST00000568158 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
CNOT1-213ENST00000568158 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
CNOT1-213ENST00000568158 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
CNOT1-213ENST00000568158 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
CNOT1-213ENST00000568158 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
CNOT1-213ENST00000568158 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
CNOT1-213ENST00000568158 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
CNOT1-213ENST00000568158 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
CNOT1-213ENST00000568158 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
CNOT1-213ENST00000568158 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
CNOT1-213ENST00000568158 CACNA1SQ13698 1873 aa16.57■□□□□ 0.24
CNOT1-213ENST00000568158 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
CNOT1-213ENST00000568158 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
CNOT1-213ENST00000568158 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
CNOT1-213ENST00000568158 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
CNOT1-213ENST00000568158 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
CNOT1-213ENST00000568158 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
CNOT1-213ENST00000568158 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
CNOT1-213ENST00000568158 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
CNOT1-213ENST00000568158 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
CNOT1-213ENST00000568158 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
CNOT1-213ENST00000568158 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
CNOT1-213ENST00000568158 SMC4Q9NTJ3 1288 aa16.56■□□□□ 0.24
CNOT1-213ENST00000568158 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
CNOT1-213ENST00000568158 H7C1W4 665 aa16.55■□□□□ 0.24
CNOT1-213ENST00000568158 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
CNOT1-213ENST00000568158 RASSF7Q02833 373 aa16.55■□□□□ 0.24
CNOT1-213ENST00000568158 GCKRQ14397 625 aa16.55■□□□□ 0.24
CNOT1-213ENST00000568158 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
CNOT1-213ENST00000568158 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
CNOT1-213ENST00000568158 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
CNOT1-213ENST00000568158 UTRNP46939 3433 aa16.54■□□□□ 0.24
CNOT1-213ENST00000568158 TAF1P21675 1872 aa16.53■□□□□ 0.24
CNOT1-213ENST00000568158 NFKBIEO00221 500 aa16.53■□□□□ 0.24
CNOT1-213ENST00000568158 PDE8AO60658 829 aa16.53■□□□□ 0.24
CNOT1-213ENST00000568158 PRELPP51888 382 aa16.53■□□□□ 0.24
CNOT1-213ENST00000568158 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
CNOT1-213ENST00000568158 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
CNOT1-213ENST00000568158 LAMB2P55268 1798 aa16.53■□□□□ 0.24
CNOT1-213ENST00000568158 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
CNOT1-213ENST00000568158 ABCC4O15439 1325 aa16.52■□□□□ 0.24
CNOT1-213ENST00000568158 CASP7P55210 303 aa16.52■□□□□ 0.24
CNOT1-213ENST00000568158 C9orf131Q5VYM1 1079 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms