RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 RTL5Q5HYW3 569 aaPredicted RBP13.04□□□□□ -0.32
TCF4-236ENST00000567880 UBE3BQ7Z3V4 1068 aa13.04□□□□□ -0.32
TCF4-236ENST00000567880 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
TCF4-236ENST00000567880 C4AP0C0L4 1744 aa13.04□□□□□ -0.32
TCF4-236ENST00000567880 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
TCF4-236ENST00000567880 AK7Q96M32 723 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 ERVV-1B6SEH8 477 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
TCF4-236ENST00000567880 UTYO14607 1347 aa13.03□□□□□ -0.32
TCF4-236ENST00000567880 SCN7AQ01118 1682 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 PNMA6EA0A0J9YXQ4 647 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 HMMRO75330 724 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 RPS6KA4O75676 772 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 PHF14O94880 888 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.32
TCF4-236ENST00000567880 MYH3P11055 1940 aa13.02□□□□□ -0.33
TCF4-236ENST00000567880 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 PLSCR1O15162 318 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 PROM2Q8N271 834 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 BICC1Q9H694 974 aaKnown RBP13.01□□□□□ -0.33
TCF4-236ENST00000567880 PDZRN3Q9UPQ7 1066 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
TCF4-236ENST00000567880 RGPD3A6NKT7 1758 aaPredicted RBP13.01□□□□□ -0.33
TCF4-236ENST00000567880 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
TCF4-236ENST00000567880 APBB1O00213 710 aa13□□□□□ -0.33
TCF4-236ENST00000567880 SRGAP3O43295 1099 aa13□□□□□ -0.33
TCF4-236ENST00000567880 RGS3P49796 1198 aa13□□□□□ -0.33
TCF4-236ENST00000567880 GCC1Q96CN9 775 aa13□□□□□ -0.33
TCF4-236ENST00000567880 KAZALD1Q96I82 304 aa13□□□□□ -0.33
TCF4-236ENST00000567880 H7C1W4 665 aa13□□□□□ -0.33
TCF4-236ENST00000567880 NLRP10Q86W26 655 aa13□□□□□ -0.33
TCF4-236ENST00000567880 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
TCF4-236ENST00000567880 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 ZPR1O75312 459 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
TCF4-236ENST00000567880 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
TCF4-236ENST00000567880 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 ANKRD45Q5TZF3 282 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
TCF4-236ENST00000567880 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 ARID3AQ99856 593 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
TCF4-236ENST00000567880 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
TCF4-236ENST00000567880 CASP7P55210 303 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
TCF4-236ENST00000567880 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 RFC4P35249 363 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
TCF4-236ENST00000567880 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
TCF4-236ENST00000567880 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
TCF4-236ENST00000567880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
TCF4-236ENST00000567880 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
TCF4-236ENST00000567880 MTX1Q13505 466 aa12.97□□□□□ -0.33
TCF4-236ENST00000567880 SYNE4Q8N205 404 aa12.97□□□□□ -0.33
TCF4-236ENST00000567880 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
TCF4-236ENST00000567880 NUCB1Q02818 461 aa12.96□□□□□ -0.33
TCF4-236ENST00000567880 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
TCF4-236ENST00000567880 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
TCF4-236ENST00000567880 POLA2Q14181 598 aa12.96□□□□□ -0.33
TCF4-236ENST00000567880 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
TCF4-236ENST00000567880 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
TCF4-236ENST00000567880 SURF6O75683 361 aaKnown RBP12.96□□□□□ -0.34
TCF4-236ENST00000567880 SUSD4Q5VX71 490 aa12.96□□□□□ -0.34
TCF4-236ENST00000567880 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.34
TCF4-236ENST00000567880 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.34
TCF4-236ENST00000567880 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.34
TCF4-236ENST00000567880 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.34
TCF4-236ENST00000567880 CASZ1Q86V15 1759 aa12.96□□□□□ -0.34
TCF4-236ENST00000567880 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
TCF4-236ENST00000567880 SMARCA5O60264 1052 aaPredicted RBP12.95□□□□□ -0.34
TCF4-236ENST00000567880 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
TCF4-236ENST00000567880 FOXO4P98177 505 aa12.95□□□□□ -0.34
TCF4-236ENST00000567880 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
TCF4-236ENST00000567880 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
TCF4-236ENST00000567880 PARP10Q53GL7 1025 aa12.95□□□□□ -0.34
TCF4-236ENST00000567880 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
TCF4-236ENST00000567880 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
TCF4-236ENST00000567880 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
TCF4-236ENST00000567880 SSFA2P28290 1259 aa12.94□□□□□ -0.34
TCF4-236ENST00000567880 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
TCF4-236ENST00000567880 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
TCF4-236ENST00000567880 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms