RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 CCDC82Q8N4S0 544 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 SCG3Q8WXD2 468 aaKnown RBP8.13□□□□□ -1.11
CAPN3-217ENST00000567817 ZIC5Q96T25 663 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 NDFIP2Q9NV92 336 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
CAPN3-217ENST00000567817 CFAP43Q8NDM7 1665 aa8.13□□□□□ -1.11
CAPN3-217ENST00000567817 PHLDB1Q86UU1 1377 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 ADAMTSL3P82987 1691 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 ATG7O95352 703 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 MX2P20592 715 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 IGFBP4P22692 258 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 C1orf53Q5VUE5 145 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 C2orf49Q9BVC5 232 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-217ENST00000567817 ZCCHC2Q9C0B9 1178 aaKnown RBP8.12□□□□□ -1.11
CAPN3-217ENST00000567817 PCDHGC4Q9Y5F7 938 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
CAPN3-217ENST00000567817 IGF1RP08069 1367 aa8.11□□□□□ -1.11
CAPN3-217ENST00000567817 KIF21BO75037 1637 aa8.11□□□□□ -1.11
CAPN3-217ENST00000567817 SWI5Q1ZZU3 235 aa8.11□□□□□ -1.11
CAPN3-217ENST00000567817 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
CAPN3-217ENST00000567817 ZMIZ1Q9ULJ6 1067 aa8.11□□□□□ -1.11
CAPN3-217ENST00000567817 ARAP3Q8WWN8 1544 aa8.11□□□□□ -1.11
CAPN3-217ENST00000567817 SPATA31D1Q6ZQQ2 1576 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 ACIN1Q9UKV3 1341 aaKnown RBP8.1□□□□□ -1.11
CAPN3-217ENST00000567817 ATXN7O15265 892 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-217ENST00000567817 BNIP3LO60238 219 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 FAM157BP0CG42 384 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 FGFR3P22607 806 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 MAP2K3P46734 347 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 ILDR2Q71H61 639 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 RHPN1Q8TCX5 695 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 ABHD17AQ96GS6 310 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 CD109Q6YHK3 1445 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 ZCCHC11Q5TAX3 1644 aaKnown RBP8.1□□□□□ -1.11
CAPN3-217ENST00000567817 IQGAP2Q13576 1575 aa8.1□□□□□ -1.11
CAPN3-217ENST00000567817 FOXO3O43524 673 aa8.09□□□□□ -1.11
CAPN3-217ENST00000567817 WEE1P30291 646 aa8.09□□□□□ -1.11
CAPN3-217ENST00000567817 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
CAPN3-217ENST00000567817 KIF27Q86VH2 1401 aa8.09□□□□□ -1.11
CAPN3-217ENST00000567817 ZNF385CQ66K41 422 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-217ENST00000567817 ALDH16A1Q8IZ83 802 aa8.08□□□□□ -1.12
CAPN3-217ENST00000567817 SVOPQ8N4V2 548 aa8.08□□□□□ -1.12
CAPN3-217ENST00000567817 HCN4Q9Y3Q4 1203 aa8.08□□□□□ -1.12
CAPN3-217ENST00000567817 DCDC2BA2VCK2 349 aa8.07□□□□□ -1.12
CAPN3-217ENST00000567817 LGR5O75473 907 aa8.07□□□□□ -1.12
CAPN3-217ENST00000567817 HIF1AQ16665 826 aa8.07□□□□□ -1.12
CAPN3-217ENST00000567817 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
CAPN3-217ENST00000567817 NEUROD4Q9HD90 331 aa8.07□□□□□ -1.12
CAPN3-217ENST00000567817 KHNYNO15037 678 aaKnown RBP8.06□□□□□ -1.12
CAPN3-217ENST00000567817 MAPTP10636 758 aaKnown RBP8.06□□□□□ -1.12
CAPN3-217ENST00000567817 TNP2Q05952 138 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 LAMC2Q13753 1193 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 LRRC69Q6ZNQ3 347 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 ANKIB1Q9P2G1 1089 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 DISP1Q96F81 1524 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 BCORL1Q5H9F3 1711 aa8.06□□□□□ -1.12
CAPN3-217ENST00000567817 EFSO43281 561 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-217ENST00000567817 CELA2BP08218 269 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-217ENST00000567817 BMP4P12644 408 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 MAP3K10Q02779 954 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 RTN1Q16799 776 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 TMEM164Q5U3C3 297 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 LYPD4Q6UWN0 246 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 LRRC4BQ9NT99 713 aa8.05□□□□□ -1.12
CAPN3-217ENST00000567817 UGGT2Q9NYU1 1516 aa8.04□□□□□ -1.12
CAPN3-217ENST00000567817 ARHGEF15O94989 841 aa8.04□□□□□ -1.12
CAPN3-217ENST00000567817 CTBSQ01459 385 aa8.04□□□□□ -1.12
CAPN3-217ENST00000567817 VTI1AQ96AJ9 217 aa8.04□□□□□ -1.12
CAPN3-217ENST00000567817 ACDQ96AP0 544 aa8.04□□□□□ -1.12
CAPN3-217ENST00000567817 NGLY1Q96IV0 654 aa8.04□□□□□ -1.12
CAPN3-217ENST00000567817 OXCT2Q9BYC2 517 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-217ENST00000567817 GDF2Q9UK05 429 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-217ENST00000567817 CARMIL1Q5VZK9 1371 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 KLRG1Q96E93 195 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 HSH2DQ96JZ2 352 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 SUSD3Q96L08 255 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 MARK1Q9P0L2 795 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 MADDQ8WXG6 1647 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 POGZQ7Z3K3 1410 aa8.03□□□□□ -1.12
CAPN3-217ENST00000567817 IQSEC2Q5JU85 1478 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 NEO1Q92859 1461 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 C2CD2LO14523 706 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 BCRP11274 1271 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 CD33P20138 364 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 OCLNQ16625 522 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 IER5Q5VY09 327 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 FAM9AQ8IZU1 332 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-217ENST00000567817 GOLGA6L1Q8N7Z2 621 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 CLP1Q92989 425 aaKnown RBP8.02□□□□□ -1.13
CAPN3-217ENST00000567817 AVENQ9NQS1 362 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-217ENST00000567817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.02□□□□□ -1.13
CAPN3-217ENST00000567817 ENAMQ9NRM1 1142 aa8.02□□□□□ -1.13
CAPN3-217ENST00000567817 HCN2Q9UL51 889 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms