RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SSH1Q8WYL5 1049 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 ZNF428Q96B54 188 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 MYD88Q99836 296 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 BRIP1Q9BX63 1249 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
COMMD4-220ENST00000567720 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-220ENST00000567720 ERFEQ4G0M1 354 aa22.02■■□□□ 1.12
COMMD4-220ENST00000567720 MRPL50Q8N5N7 158 aaKnown RBP22.02■■□□□ 1.12
COMMD4-220ENST00000567720 METTL22Q9BUU2 404 aaPredicted RBP22.02■■□□□ 1.12
COMMD4-220ENST00000567720 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
COMMD4-220ENST00000567720 TAF1P21675 1872 aa22.02■■□□□ 1.12
COMMD4-220ENST00000567720 YBX3P16989 372 aaKnown RBP eCLIP22.01■■□□□ 1.11
COMMD4-220ENST00000567720 PPP1R42Q7Z4L9 355 aa22.01■■□□□ 1.11
COMMD4-220ENST00000567720 RNF123Q5XPI4 1314 aa22.01■■□□□ 1.11
COMMD4-220ENST00000567720 C2CD5Q86YS7 1000 aa22■■□□□ 1.11
COMMD4-220ENST00000567720 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
COMMD4-220ENST00000567720 IGKV5-2P06315 115 aa21.99■■□□□ 1.11
COMMD4-220ENST00000567720 PDE6BP35913 854 aa21.99■■□□□ 1.11
COMMD4-220ENST00000567720 TRIM28Q13263 835 aaKnown RBP21.99■■□□□ 1.11
COMMD4-220ENST00000567720 ALDH1L2Q3SY69 923 aa21.99■■□□□ 1.11
COMMD4-220ENST00000567720 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
COMMD4-220ENST00000567720 GTF2E1P29083 439 aaPredicted RBP21.98■■□□□ 1.11
COMMD4-220ENST00000567720 SYNE4Q8N205 404 aa21.98■■□□□ 1.11
COMMD4-220ENST00000567720 DNAAF4Q8WXU2 420 aa21.98■■□□□ 1.11
COMMD4-220ENST00000567720 SMC4Q9NTJ3 1288 aa21.98■■□□□ 1.11
COMMD4-220ENST00000567720 FER1L6Q2WGJ9 1857 aa21.98■■□□□ 1.11
COMMD4-220ENST00000567720 KLRG2A4D1S0 409 aaPredicted RBP21.97■■□□□ 1.11
COMMD4-220ENST00000567720 F6X3S4 739 aa21.97■■□□□ 1.11
COMMD4-220ENST00000567720 TRMT112Q9UI30 125 aaKnown RBP21.97■■□□□ 1.11
COMMD4-220ENST00000567720 SH3TC1Q8TE82 1336 aa21.97■■□□□ 1.11
COMMD4-220ENST00000567720 COL4A1P02462 1669 aa21.97■■□□□ 1.11
COMMD4-220ENST00000567720 SPEF2Q9C093 1822 aa21.96■■□□□ 1.11
COMMD4-220ENST00000567720 H0YIN7 160 aa21.96■■□□□ 1.11
COMMD4-220ENST00000567720 GPR162Q16538 588 aa21.96■■□□□ 1.11
COMMD4-220ENST00000567720 CWF19L2Q2TBE0 894 aaKnown RBP21.96■■□□□ 1.11
COMMD4-220ENST00000567720 C3orf67Q6ZVT6 689 aa21.96■■□□□ 1.11
COMMD4-220ENST00000567720 LRRC37AA6NMS7 1700 aa21.95■■□□□ 1.1
COMMD4-220ENST00000567720 SRGNP10124 158 aa21.95■■□□□ 1.1
COMMD4-220ENST00000567720 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
COMMD4-220ENST00000567720 CRY2Q49AN0 593 aa21.95■■□□□ 1.1
COMMD4-220ENST00000567720 CCDC191Q8NCU4 936 aa21.95■■□□□ 1.1
COMMD4-220ENST00000567720 CWC25Q9NXE8 425 aaPredicted RBP21.95■■□□□ 1.1
COMMD4-220ENST00000567720 PIM2Q9P1W9 311 aa21.95■■□□□ 1.1
COMMD4-220ENST00000567720 PDZRN3Q9UPQ7 1066 aa21.95■■□□□ 1.1
COMMD4-220ENST00000567720 SBF1O95248 1867 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 NEURL1BA8MQ27 555 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 NEXNQ0ZGT2 675 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 FAM89AQ96GI7 184 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 BCS1LQ9Y276 419 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 PTPRCP08575 1304 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 CCDC88AQ3V6T2 1871 aa21.94■■□□□ 1.1
COMMD4-220ENST00000567720 HCLS1P14317 486 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-220ENST00000567720 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
COMMD4-220ENST00000567720 DALRD3Q5D0E6 543 aaKnown RBP21.92■■□□□ 1.1
COMMD4-220ENST00000567720 SLC10A5Q5PT55 438 aa21.92■■□□□ 1.1
COMMD4-220ENST00000567720 STYK1Q6J9G0 422 aa21.92■■□□□ 1.1
COMMD4-220ENST00000567720 MASTLQ96GX5 879 aa21.92■■□□□ 1.1
COMMD4-220ENST00000567720 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-220ENST00000567720 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-220ENST00000567720 BEND3Q5T5X7 828 aa21.91■■□□□ 1.1
COMMD4-220ENST00000567720 ZBTB38Q8NAP3 1195 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-220ENST00000567720 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
COMMD4-220ENST00000567720 ZNF622Q969S3 477 aaKnown RBP eCLIP21.91■■□□□ 1.1
COMMD4-220ENST00000567720 TIAM2Q8IVF5 1701 aa21.91■■□□□ 1.1
COMMD4-220ENST00000567720 DCAF8L1A6NGE4 600 aa21.9■■□□□ 1.1
COMMD4-220ENST00000567720 NPR1P16066 1061 aa21.9■■□□□ 1.1
COMMD4-220ENST00000567720 TTLL6Q8N841 843 aa21.9■■□□□ 1.1
COMMD4-220ENST00000567720 KIF16BQ96L93 1317 aa21.89■■□□□ 1.1
COMMD4-220ENST00000567720 PRPF40BQ6NWY9 871 aaKnown RBP21.89■■□□□ 1.09
COMMD4-220ENST00000567720 JARID2Q92833 1246 aaPredicted RBP21.89■■□□□ 1.09
COMMD4-220ENST00000567720 YTHDC1Q96MU7 727 aaKnown RBP21.89■■□□□ 1.09
COMMD4-220ENST00000567720 CDHR2Q9BYE9 1310 aa21.88■■□□□ 1.09
COMMD4-220ENST00000567720 IRS4O14654 1257 aaPredicted RBP21.88■■□□□ 1.09
COMMD4-220ENST00000567720 GCKRQ14397 625 aa21.88■■□□□ 1.09
COMMD4-220ENST00000567720 NLRP3Q96P20 1036 aa21.88■■□□□ 1.09
COMMD4-220ENST00000567720 DICER1Q9UPY3 1922 aaKnown RBP21.88■■□□□ 1.09
COMMD4-220ENST00000567720 BCAR3O75815 825 aa21.87■■□□□ 1.09
COMMD4-220ENST00000567720 SLC4A10Q6U841 1118 aa21.87■■□□□ 1.09
COMMD4-220ENST00000567720 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
COMMD4-220ENST00000567720 SNED1Q8TER0 1413 aa21.87■■□□□ 1.09
COMMD4-220ENST00000567720 A0A1B0GUL6 1792 aa21.87■■□□□ 1.09
COMMD4-220ENST00000567720 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
COMMD4-220ENST00000567720 GRIN3BO60391 1043 aa21.86■■□□□ 1.09
COMMD4-220ENST00000567720 HOXA10P31260 410 aaPredicted RBP21.86■■□□□ 1.09
COMMD4-220ENST00000567720 UBE3BQ7Z3V4 1068 aa21.86■■□□□ 1.09
COMMD4-220ENST00000567720 RPGRQ92834 1020 aaKnown RBP21.86■■□□□ 1.09
COMMD4-220ENST00000567720 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
COMMD4-220ENST00000567720 ABCC4O15439 1325 aa21.85■■□□□ 1.09
COMMD4-220ENST00000567720 CASP7P55210 303 aa21.85■■□□□ 1.09
COMMD4-220ENST00000567720 H7C1W4 665 aa21.84■■□□□ 1.09
COMMD4-220ENST00000567720 SLC51AQ86UW1 340 aa21.84■■□□□ 1.09
COMMD4-220ENST00000567720 SRCIN1Q9C0H9 1055 aa21.84■■□□□ 1.09
COMMD4-220ENST00000567720 ALDH1L1O75891 902 aa21.83■■□□□ 1.09
COMMD4-220ENST00000567720 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
COMMD4-220ENST00000567720 RBM17Q96I25 401 aaKnown RBP21.82■■□□□ 1.08
COMMD4-220ENST00000567720 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
COMMD4-220ENST00000567720 ZNF219Q9P2Y4 722 aaPredicted RBP21.82■■□□□ 1.08
COMMD4-220ENST00000567720 TNNQ9UQP3 1299 aa21.82■■□□□ 1.08
COMMD4-220ENST00000567720 DUOX1Q9NRD9 1551 aa21.82■■□□□ 1.08
COMMD4-220ENST00000567720 GRM8O00222 908 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms