RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	ERFE	Q4G0M1	354 aa		21.3	■■□□□ 1
INO80E-210	ENST00000567705	NUTM1	Q86Y26	1132 aa		21.3	■■□□□ 1
INO80E-210	ENST00000567705	STK31	Q9BXU1	1019 aa		21.3	■■□□□ 1
INO80E-210	ENST00000567705	BCS1L	Q9Y276	419 aa		21.3	■■□□□ 1
INO80E-210	ENST00000567705	PPP1R42	Q7Z4L9	355 aa		21.29	■■□□□ 1
INO80E-210	ENST00000567705	FAM177B	A6PVY3	158 aa		21.28	■■□□□ 1
INO80E-210	ENST00000567705	FLII	Q13045	1269 aa		21.28	■■□□□ 1
INO80E-210	ENST00000567705	DALRD3	Q5D0E6	543 aa	Known RBP	21.28	■■□□□ 1
INO80E-210	ENST00000567705	STYK1	Q6J9G0	422 aa		21.28	■■□□□ 1
INO80E-210	ENST00000567705	KSR2	Q6VAB6	950 aa		21.28	■■□□□ 1
INO80E-210	ENST00000567705	METTL22	Q9BUU2	404 aa	Predicted RBP	21.28	■■□□□ 1
INO80E-210	ENST00000567705	UTP14A	Q9BVJ6	771 aa	Known RBP	21.28	■■□□□ 1
INO80E-210	ENST00000567705	PI4KAP2	A4QPH2	592 aa		21.27	■■□□□ 1
INO80E-210	ENST00000567705	PI4KAP1	Q8N8J0	262 aa		21.27	■■□□□ 1
INO80E-210	ENST00000567705	C3orf67	Q6ZVT6	689 aa		21.26	■□□□□ 0.99
INO80E-210	ENST00000567705	RIC3	Q7Z5B4	369 aa		21.26	■□□□□ 0.99
INO80E-210	ENST00000567705	SYNE4	Q8N205	404 aa		21.26	■□□□□ 0.99
INO80E-210	ENST00000567705	TTLL6	Q8N841	843 aa		21.26	■□□□□ 0.99
INO80E-210	ENST00000567705	MASTL	Q96GX5	879 aa		21.26	■□□□□ 0.99
INO80E-210	ENST00000567705	ATP5J2-PTCD1	G3V325	749 aa		21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	DDX58	O95786	925 aa	Known RBP	21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	IGKV5-2	P06315	115 aa		21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	HOXA10	P31260	410 aa	Predicted RBP	21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	C7orf43	Q8WVR3	580 aa		21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	ZNF428	Q96B54	188 aa		21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	MAP3K2	Q9Y2U5	619 aa		21.25	■□□□□ 0.99
INO80E-210	ENST00000567705	NPR1	P16066	1061 aa		21.24	■□□□□ 0.99
INO80E-210	ENST00000567705	SNED1	Q8TER0	1413 aa		21.23	■□□□□ 0.99
INO80E-210	ENST00000567705	CCDC191	Q8NCU4	936 aa		21.23	■□□□□ 0.99
INO80E-210	ENST00000567705	DDX60	Q8IY21	1712 aa	Known RBP	21.23	■□□□□ 0.99
INO80E-210	ENST00000567705	SH3TC1	Q8TE82	1336 aa		21.23	■□□□□ 0.99
INO80E-210	ENST00000567705	NPHP1	O15259	732 aa		21.22	■□□□□ 0.99
INO80E-210	ENST00000567705	CT47B1	P0C2W7	299 aa	Predicted RBP	21.22	■□□□□ 0.99
INO80E-210	ENST00000567705	CNKSR1	Q969H4	720 aa		21.22	■□□□□ 0.99
INO80E-210	ENST00000567705	MYD88	Q99836	296 aa		21.22	■□□□□ 0.99
INO80E-210	ENST00000567705	TRMT112	Q9UI30	125 aa	Known RBP	21.22	■□□□□ 0.99
INO80E-210	ENST00000567705	SLX4	Q8IY92	1834 aa		21.22	■□□□□ 0.99
INO80E-210	ENST00000567705	GTF2E1	P29083	439 aa	Predicted RBP	21.21	■□□□□ 0.99
INO80E-210	ENST00000567705	HNRNPU	Q00839	825 aa	Known RBP eCLIP	21.21	■□□□□ 0.99	1e-7	■■□□□ 13.2
INO80E-210	ENST00000567705	ARHGAP27	Q6ZUM4	889 aa		21.21	■□□□□ 0.99
INO80E-210	ENST00000567705	MRPL50	Q8N5N7	158 aa	Known RBP	21.21	■□□□□ 0.99
INO80E-210	ENST00000567705	LAMB2	P55268	1798 aa		21.2	■□□□□ 0.99
INO80E-210	ENST00000567705	PRPF40B	Q6NWY9	871 aa	Known RBP	21.2	■□□□□ 0.98
INO80E-210	ENST00000567705	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	21.2	■□□□□ 0.98
INO80E-210	ENST00000567705	SSH1	Q8WYL5	1049 aa		21.2	■□□□□ 0.98
INO80E-210	ENST00000567705	ZNF622	Q969S3	477 aa	Known RBP eCLIP	21.2	■□□□□ 0.98
INO80E-210	ENST00000567705	FAM89A	Q96GI7	184 aa		21.2	■□□□□ 0.98
INO80E-210	ENST00000567705	ZBED9	Q6R2W3	1325 aa		21.2	■□□□□ 0.98
INO80E-210	ENST00000567705	NEURL1B	A8MQ27	555 aa		21.19	■□□□□ 0.98
INO80E-210	ENST00000567705	PCCA	P05165	728 aa	Predicted RBP	21.19	■□□□□ 0.98
INO80E-210	ENST00000567705	BRPF1	P55201	1214 aa	Predicted RBP	21.19	■□□□□ 0.98
INO80E-210	ENST00000567705	C1QTNF8	P60827	252 aa		21.19	■□□□□ 0.98
INO80E-210	ENST00000567705	ALDH1L2	Q3SY69	923 aa		21.19	■□□□□ 0.98
INO80E-210	ENST00000567705	HCLS1	P14317	486 aa	Predicted RBP	21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	PRELP	P51888	382 aa		21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	FKBP5	Q13451	457 aa	Predicted RBP	21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	DNAAF4	Q8WXU2	420 aa		21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	NLRP3	Q96P20	1036 aa		21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	CRAMP1	Q96RY5	1269 aa		21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	CWC25	Q9NXE8	425 aa	Predicted RBP	21.18	■□□□□ 0.98
INO80E-210	ENST00000567705	NFKBIE	O00221	500 aa		21.17	■□□□□ 0.98
INO80E-210	ENST00000567705	SF3B3	Q15393	1217 aa	Known RBP	21.17	■□□□□ 0.98
INO80E-210	ENST00000567705	CWF19L2	Q2TBE0	894 aa	Known RBP	21.17	■□□□□ 0.98
INO80E-210	ENST00000567705	GPBP1L1	Q9HC44	474 aa	Predicted RBP	21.17	■□□□□ 0.98
INO80E-210	ENST00000567705	FER1L6	Q2WGJ9	1857 aa		21.17	■□□□□ 0.98
INO80E-210	ENST00000567705	CDHR2	Q9BYE9	1310 aa		21.16	■□□□□ 0.98
INO80E-210	ENST00000567705	ALDH1B1	P30837	517 aa		21.16	■□□□□ 0.98
INO80E-210	ENST00000567705	CASP7	P55210	303 aa		21.16	■□□□□ 0.98
INO80E-210	ENST00000567705	BEND3	Q5T5X7	828 aa		21.16	■□□□□ 0.98
INO80E-210	ENST00000567705	LINS1	Q8NG48	757 aa		21.16	■□□□□ 0.98
INO80E-210	ENST00000567705	LTBP3	Q9NS15	1303 aa		21.15	■□□□□ 0.98
INO80E-210	ENST00000567705		H7C1W4	665 aa		21.15	■□□□□ 0.98
INO80E-210	ENST00000567705	C21orf2	O43822	256 aa		21.15	■□□□□ 0.98
INO80E-210	ENST00000567705	SBF1	O95248	1867 aa		21.14	■□□□□ 0.97
INO80E-210	ENST00000567705		F6X3S4	739 aa		21.14	■□□□□ 0.97
INO80E-210	ENST00000567705	IRS4	O14654	1257 aa	Predicted RBP	21.14	■□□□□ 0.97
INO80E-210	ENST00000567705	GCKR	Q14397	625 aa		21.14	■□□□□ 0.97
INO80E-210	ENST00000567705	COL4A1	P02462	1669 aa		21.14	■□□□□ 0.97
INO80E-210	ENST00000567705	ABCC4	O15439	1325 aa		21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	PTPRC	P08575	1304 aa		21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	RARS	P54136	660 aa	Known RBP	21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	NEXN	Q0ZGT2	675 aa		21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	ZNF526	Q8TF50	670 aa	Predicted RBP	21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	RBM17	Q96I25	401 aa	Known RBP	21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	CACNA1S	Q13698	1873 aa		21.13	■□□□□ 0.97
INO80E-210	ENST00000567705	RPGR	Q92834	1020 aa	Known RBP	21.12	■□□□□ 0.97
INO80E-210	ENST00000567705	SOGA3	Q5TF21	947 aa		21.11	■□□□□ 0.97
INO80E-210	ENST00000567705	C9orf131	Q5VYM1	1079 aa		21.11	■□□□□ 0.97
INO80E-210	ENST00000567705	OLFM4	Q6UX06	510 aa		21.11	■□□□□ 0.97
INO80E-210	ENST00000567705	SLC51A	Q86UW1	340 aa		21.11	■□□□□ 0.97
INO80E-210	ENST00000567705	PLA2G12B	Q9BX93	195 aa		21.11	■□□□□ 0.97
INO80E-210	ENST00000567705	RASSF7	Q02833	373 aa		21.1	■□□□□ 0.97
INO80E-210	ENST00000567705	RTL5	Q5HYW3	569 aa	Predicted RBP	21.1	■□□□□ 0.97
INO80E-210	ENST00000567705	PDE8A	O60658	829 aa		21.09	■□□□□ 0.97
INO80E-210	ENST00000567705	JARID2	Q92833	1246 aa	Predicted RBP	21.09	■□□□□ 0.97
INO80E-210	ENST00000567705	BCL2L13	Q9BXK5	485 aa		21.09	■□□□□ 0.97
INO80E-210	ENST00000567705	LRRC37A	A6NMS7	1700 aa		21.08	■□□□□ 0.97
INO80E-210	ENST00000567705	BBOX1	O75936	387 aa		21.08	■□□□□ 0.97
INO80E-210	ENST00000567705	HSP90B1	P14625	803 aa	Known RBP	21.08	■□□□□ 0.97
INO80E-210	ENST00000567705	GRAP	Q13588	217 aa		21.08	■□□□□ 0.97

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms