RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 GPR25O00155 361 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 ALKBH2Q6NS38 261 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 FIGNL1Q6PIW4 674 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 GJD3Q8N144 294 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 GPR152Q8TDT2 470 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 EDEM1Q92611 657 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 CEP63Q96MT8 703 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 BIN2Q9UBW5 565 aaPredicted RBP8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 GJA3Q9Y6H8 435 aa8.7□□□□□ -1.02
SHCBP1-206ENST00000567698 TERTO14746 1132 aaKnown RBP8.69□□□□□ -1.02
SHCBP1-206ENST00000567698 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
SHCBP1-206ENST00000567698 TMCO4Q5TGY1 634 aa8.69□□□□□ -1.02
SHCBP1-206ENST00000567698 GGNBP2Q9H3C7 697 aa8.69□□□□□ -1.02
SHCBP1-206ENST00000567698 NEUROD4Q9HD90 331 aa8.69□□□□□ -1.02
SHCBP1-206ENST00000567698 RTCBQ9Y3I0 505 aaKnown RBP8.69□□□□□ -1.02
SHCBP1-206ENST00000567698 CDC14CA4D256 554 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 LAMC2Q13753 1193 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 NUDT16Q96DE0 195 aaKnown RBP8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 FAM129BQ96TA1 746 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 CFHR5Q9BXR6 569 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 RBCK1Q9BYM8 510 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 ATXN7L1Q9ULK2 861 aaPredicted RBP8.68□□□□□ -1.02
SHCBP1-206ENST00000567698 KHNYNO15037 678 aaKnown RBP8.67□□□□□ -1.02
SHCBP1-206ENST00000567698 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
SHCBP1-206ENST00000567698 DNM1Q05193 864 aaKnown RBP8.67□□□□□ -1.02
SHCBP1-206ENST00000567698 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
SHCBP1-206ENST00000567698 RGL4Q8IZJ4 473 aa8.67□□□□□ -1.02
SHCBP1-206ENST00000567698 C2CD2LO14523 706 aa8.66□□□□□ -1.02
SHCBP1-206ENST00000567698 EGFRP00533 1210 aa8.66□□□□□ -1.02
SHCBP1-206ENST00000567698 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
SHCBP1-206ENST00000567698 CTBSQ01459 385 aa8.66□□□□□ -1.02
SHCBP1-206ENST00000567698 A6NHS1 94 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 GPR182O15218 404 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 CD33P20138 364 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 KRT76Q01546 638 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 RNFT1Q5M7Z0 435 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 TMC7Q7Z402 723 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 SLC30A3Q99726 388 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 GSX2Q9BZM3 304 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
SHCBP1-206ENST00000567698 FGFR3P22607 806 aa8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 MAPK1P28482 360 aa8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 ASB16Q96NS5 453 aa8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 C11orf16Q9NQ32 467 aa8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 BRPF3Q9ULD4 1205 aa8.64□□□□□ -1.03
SHCBP1-206ENST00000567698 NDUFB5O43674 189 aa8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 DSC3Q14574 896 aa8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 CMTR1Q8N1G2 835 aaKnown RBP8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 PIK3R5Q8WYR1 880 aa8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 FAM13BQ9NYF5 915 aa8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
SHCBP1-206ENST00000567698 XKR5Q6UX68 686 aa8.62□□□□□ -1.03
SHCBP1-206ENST00000567698 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
SHCBP1-206ENST00000567698 ZFATQ9P243 1243 aa8.62□□□□□ -1.03
SHCBP1-206ENST00000567698 TREHO43280 583 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 XYLBO75191 536 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 EPB42P16452 691 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 AAMPQ13685 434 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 KLF15Q9UIH9 416 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 PHF24Q9UPV7 400 aa8.61□□□□□ -1.03
SHCBP1-206ENST00000567698 USP5P45974 858 aa8.6□□□□□ -1.03
SHCBP1-206ENST00000567698 SPEM2Q0P670 501 aa8.6□□□□□ -1.03
SHCBP1-206ENST00000567698 ALKBH8Q96BT7 664 aaKnown RBP8.6□□□□□ -1.03
SHCBP1-206ENST00000567698 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
SHCBP1-206ENST00000567698 TMEM63CQ9P1W3 806 aa8.6□□□□□ -1.03
SHCBP1-206ENST00000567698 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 UBAP1LF5GYI3 381 aa8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 FMR1Q06787 632 aaKnown RBP eCLIP8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 CCINQ13939 588 aa8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 FOXR1Q6PIV2 292 aa8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 RAB44Q7Z6P3 723 aaPredicted RBP8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 MDFIQ99750 246 aa8.59□□□□□ -1.03
SHCBP1-206ENST00000567698 SASH3O75995 380 aa8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 TARSP26639 723 aaKnown RBP8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 DMRTB1Q96MA1 342 aa8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 ELP3Q9H9T3 547 aa8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 MBIPQ9NS73 344 aa8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.58□□□□□ -1.04
SHCBP1-206ENST00000567698 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 IRF7Q92985 503 aa8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 CNTN3Q9P232 1028 aa8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 FOXD3Q9UJU5 478 aaPredicted RBP8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 CCDC9Q9Y3X0 531 aaKnown RBP8.57□□□□□ -1.04
SHCBP1-206ENST00000567698 MAP3K6O95382 1288 aa8.56□□□□□ -1.04
SHCBP1-206ENST00000567698 NFKB1P19838 968 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 481.8 ms