RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 HDGFL1Q5TGJ6 251 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 COPS6Q7L5N1 327 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 PLBD2Q8NHP8 589 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 VPS33BQ9H267 617 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 MBIPQ9NS73 344 aa14.51□□□□□ -0.09
CDH3-206ENST00000567674 NUP98P52948 1817 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 ARFGEF2Q9Y6D5 1785 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 NFKBIEO00221 500 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 DUSP27Q5VZP5 1158 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 NLRP3Q96P20 1036 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 UTP14AQ9BVJ6 771 aaKnown RBP14.5□□□□□ -0.09
CDH3-206ENST00000567674 TAOK3Q9H2K8 898 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 SBF1O95248 1867 aa14.5□□□□□ -0.09
CDH3-206ENST00000567674 C21orf2O43822 256 aa14.49□□□□□ -0.09
CDH3-206ENST00000567674 NTSR2O95665 410 aa14.49□□□□□ -0.09
CDH3-206ENST00000567674 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
CDH3-206ENST00000567674 ANKRD13DQ6ZTN6 518 aa14.49□□□□□ -0.09
CDH3-206ENST00000567674 RBM17Q96I25 401 aaKnown RBP14.49□□□□□ -0.09
CDH3-206ENST00000567674 PSMD1Q99460 953 aa14.49□□□□□ -0.09
CDH3-206ENST00000567674 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
CDH3-206ENST00000567674 LAS1LQ9Y4W2 734 aaKnown RBP14.49□□□□□ -0.09
CDH3-206ENST00000567674 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
CDH3-206ENST00000567674 VEGFAP15692 232 aaPredicted RBP14.48□□□□□ -0.09
CDH3-206ENST00000567674 CCDC30Q5VVM6 783 aa14.48□□□□□ -0.09
CDH3-206ENST00000567674 TMC4Q7Z404 712 aa14.48□□□□□ -0.09
CDH3-206ENST00000567674 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
CDH3-206ENST00000567674 XAGE3Q8WTP9 111 aa14.48□□□□□ -0.09
CDH3-206ENST00000567674 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
CDH3-206ENST00000567674 FER1L6Q2WGJ9 1857 aa14.47□□□□□ -0.09
CDH3-206ENST00000567674 FKBP4Q02790 459 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDH3-206ENST00000567674 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
CDH3-206ENST00000567674 RPGRQ92834 1020 aaKnown RBP14.47□□□□□ -0.09
CDH3-206ENST00000567674 TMX4Q9H1E5 349 aaPredicted RBP14.47□□□□□ -0.09
CDH3-206ENST00000567674 MRS2Q9HD23 443 aa14.47□□□□□ -0.09
CDH3-206ENST00000567674 BBOX1O75936 387 aa14.46□□□□□ -0.09
CDH3-206ENST00000567674 PROSER3Q2NL68 480 aa14.46□□□□□ -0.09
CDH3-206ENST00000567674 ERFEQ4G0M1 354 aa14.46□□□□□ -0.09
CDH3-206ENST00000567674 NLRP10Q86W26 655 aa14.46□□□□□ -0.09
CDH3-206ENST00000567674 CHPF2Q9P2E5 772 aa14.46□□□□□ -0.09
CDH3-206ENST00000567674 SH3TC1Q8TE82 1336 aa14.45□□□□□ -0.1
CDH3-206ENST00000567674 DDX58O95786 925 aaKnown RBP14.45□□□□□ -0.1
CDH3-206ENST00000567674 COL11A2P13942 1736 aaPredicted RBP14.45□□□□□ -0.1
CDH3-206ENST00000567674 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
CDH3-206ENST00000567674 CCDC24Q8N4L8 307 aa14.45□□□□□ -0.1
CDH3-206ENST00000567674 ISCA1Q9BUE6 129 aa14.45□□□□□ -0.1
CDH3-206ENST00000567674 GPTP24298 496 aa14.44□□□□□ -0.1
CDH3-206ENST00000567674 RASSF7Q02833 373 aa14.44□□□□□ -0.1
CDH3-206ENST00000567674 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
CDH3-206ENST00000567674 SLX4Q8IY92 1834 aa14.43□□□□□ -0.1
CDH3-206ENST00000567674 DICER1Q9UPY3 1922 aaKnown RBP14.43□□□□□ -0.1
CDH3-206ENST00000567674 GOLGA2Q08379 1002 aa14.43□□□□□ -0.1
CDH3-206ENST00000567674 AIMP1Q12904 312 aaKnown RBP14.43□□□□□ -0.1
CDH3-206ENST00000567674 NUTM1Q86Y26 1132 aa14.43□□□□□ -0.1
CDH3-206ENST00000567674 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 FAM177BA6PVY3 158 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 FOXN1O15353 648 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 SF3B3Q15393 1217 aaKnown RBP14.42□□□□□ -0.1
CDH3-206ENST00000567674 KRT24Q2M2I5 525 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 CCDC191Q8NCU4 936 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 SUPT20HQ8NEM7 779 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
CDH3-206ENST00000567674 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 ATP6V0A2Q9Y487 856 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 ABCC12Q96J65 1359 aa14.42□□□□□ -0.1
CDH3-206ENST00000567674 SNED1Q8TER0 1413 aa14.41□□□□□ -0.1
CDH3-206ENST00000567674 CTCFP49711 727 aaPredicted RBP14.41□□□□□ -0.1
CDH3-206ENST00000567674 CCDC184Q52MB2 194 aa14.41□□□□□ -0.1
CDH3-206ENST00000567674 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
CDH3-206ENST00000567674 SP8Q8IXZ3 490 aa14.41□□□□□ -0.1
CDH3-206ENST00000567674 STK31Q9BXU1 1019 aa14.41□□□□□ -0.1
CDH3-206ENST00000567674 ANKRD36CQ5JPF3 1778 aa14.4□□□□□ -0.1
CDH3-206ENST00000567674 FZD9O00144 591 aa14.4□□□□□ -0.1
CDH3-206ENST00000567674 ANXA1P04083 346 aa14.4□□□□□ -0.1
CDH3-206ENST00000567674 DDX46Q7L014 1031 aaKnown RBP14.4□□□□□ -0.1
CDH3-206ENST00000567674 ZBTB38Q8NAP3 1195 aaPredicted RBP14.4□□□□□ -0.1
CDH3-206ENST00000567674 C8orf58Q8NAV2 365 aa14.4□□□□□ -0.1
CDH3-206ENST00000567674 JDP2Q8WYK2 163 aa14.4□□□□□ -0.1
CDH3-206ENST00000567674 NECTIN2Q92692 538 aa14.4□□□□□ -0.1
CDH3-206ENST00000567674 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
CDH3-206ENST00000567674 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
CDH3-206ENST00000567674 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
CDH3-206ENST00000567674 SYNE4Q8N205 404 aa14.39□□□□□ -0.11
CDH3-206ENST00000567674 AIDAQ96BJ3 306 aa14.39□□□□□ -0.11
CDH3-206ENST00000567674 MLLT1Q03111 559 aaPredicted RBP14.38□□□□□ -0.11
CDH3-206ENST00000567674 GRAPQ13588 217 aa14.38□□□□□ -0.11
CDH3-206ENST00000567674 TWISTNBQ3B726 338 aaPredicted RBP14.38□□□□□ -0.11
CDH3-206ENST00000567674 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
CDH3-206ENST00000567674 GPC2Q8N158 579 aa14.38□□□□□ -0.11
CDH3-206ENST00000567674 GRAPLQ8TC17 118 aaPredicted RBP14.38□□□□□ -0.11
CDH3-206ENST00000567674 ABHD8Q96I13 439 aa14.38□□□□□ -0.11
CDH3-206ENST00000567674 METTL22Q9BUU2 404 aaPredicted RBP14.38□□□□□ -0.11
CDH3-206ENST00000567674 MKRN1Q9UHC7 482 aaKnown RBP14.38□□□□□ -0.11
CDH3-206ENST00000567674 PCCAP05165 728 aaPredicted RBP14.37□□□□□ -0.11
CDH3-206ENST00000567674 PNMA8AQ86V59 439 aaPredicted RBP14.37□□□□□ -0.11
CDH3-206ENST00000567674 MYH16Q9H6N6 1097 aa14.37□□□□□ -0.11
CDH3-206ENST00000567674 ZNF219Q9P2Y4 722 aaPredicted RBP14.37□□□□□ -0.11
CDH3-206ENST00000567674 CCDC88AQ3V6T2 1871 aa14.36□□□□□ -0.11
CDH3-206ENST00000567674 POTECB2RU33 542 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms