RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HYPKQ9NX55 129 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 CHPF2Q9P2E5 772 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 DBF4Q9UBU7 674 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-209ENST00000567635 ANKRD36CQ5JPF3 1778 aa8.98□□□□□ -0.97
SF3B3-209ENST00000567635 SENP3-EIF4A1A0A087X0R7 540 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 TCIRG1Q13488 830 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 HSP90AB3PQ58FF7 597 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 SLC10A5Q5PT55 438 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 UTP14AQ9BVJ6 771 aaKnown RBP8.97□□□□□ -0.97
SF3B3-209ENST00000567635 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 RRAGCQ9HB90 399 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-209ENST00000567635 UBN2Q6ZU65 1347 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
SF3B3-209ENST00000567635 ZC3H4Q9UPT8 1303 aaKnown RBP8.97□□□□□ -0.97
SF3B3-209ENST00000567635 GLTPD2A6NH11 291 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 ELL2O00472 640 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-209ENST00000567635 TOMM70O94826 608 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 NTSR2O95665 410 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 HOXA10P31260 410 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-209ENST00000567635 CCDC27Q2M243 656 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 CRY2Q49AN0 593 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 DPY19L2Q6NUT2 758 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 ANKRD13DQ6ZTN6 518 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 C16orf71Q8IYS4 520 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-209ENST00000567635 RTKN2Q8IZC4 609 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 PLBD2Q8NHP8 589 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 RPGRQ92834 1020 aaKnown RBP8.96□□□□□ -0.98
SF3B3-209ENST00000567635 RBM17Q96I25 401 aaKnown RBP8.96□□□□□ -0.98
SF3B3-209ENST00000567635 NLRP3Q96P20 1036 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 TAOK3Q9H2K8 898 aa8.96□□□□□ -0.98
SF3B3-209ENST00000567635 IBTKQ9P2D0 1353 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-209ENST00000567635 CCDC93Q567U6 631 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 NLRP10Q86W26 655 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 C8orf58Q8NAV2 365 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 CRAMP1Q96RY5 1269 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 TAF1P21675 1872 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 ABCC12Q96J65 1359 aa8.95□□□□□ -0.98
SF3B3-209ENST00000567635 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
SF3B3-209ENST00000567635 TIAM2Q8IVF5 1701 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 LAMB2P55268 1798 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 VEGFAP15692 232 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-209ENST00000567635 HSPA6P17066 643 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 FKBP4Q02790 459 aaKnown RBP eCLIP8.94□□□□□ -0.98
SF3B3-209ENST00000567635 CCDC30Q5VVM6 783 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 CC2D2BQ6DHV5 1058 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 OLFM4Q6UX06 510 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 TRMT112Q9UI30 125 aaKnown RBP8.94□□□□□ -0.98
SF3B3-209ENST00000567635 RNF123Q5XPI4 1314 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 RIC1Q4ADV7 1423 aa8.94□□□□□ -0.98
SF3B3-209ENST00000567635 MYCNP04198 464 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-209ENST00000567635 HCLS1P14317 486 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-209ENST00000567635 TRIM28Q13263 835 aaKnown RBP8.93□□□□□ -0.98
SF3B3-209ENST00000567635 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
SF3B3-209ENST00000567635 C3orf67Q6ZVT6 689 aa8.93□□□□□ -0.98
SF3B3-209ENST00000567635 RIC3Q7Z5B4 369 aa8.93□□□□□ -0.98
SF3B3-209ENST00000567635 SYNE4Q8N205 404 aa8.93□□□□□ -0.98
SF3B3-209ENST00000567635 RBM46Q8TBY0 533 aaKnown RBP8.93□□□□□ -0.98
SF3B3-209ENST00000567635 ZNF277Q9NRM2 450 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-209ENST00000567635 IL16Q14005 1332 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 BBOX1O75936 387 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
SF3B3-209ENST00000567635 GOLGA2Q08379 1002 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 FSTL1Q12841 308 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 WDR63Q8IWG1 891 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 FAM9BQ8IZU0 186 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 TSPYL6Q8N831 410 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 TSR2Q969E8 191 aaKnown RBP8.92□□□□□ -0.98
SF3B3-209ENST00000567635 PSMD1Q99460 953 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
SF3B3-209ENST00000567635 TMX4Q9H1E5 349 aaPredicted RBP8.92□□□□□ -0.98
SF3B3-209ENST00000567635 PHAXQ9H814 394 aaKnown RBP8.92□□□□□ -0.98
SF3B3-209ENST00000567635 POTECB2RU33 542 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 TCERG1O14776 1098 aaKnown RBP8.91□□□□□ -0.98
SF3B3-209ENST00000567635 PPEF1O14829 653 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-209ENST00000567635 DDX58O95786 925 aaKnown RBP8.91□□□□□ -0.98
SF3B3-209ENST00000567635 IARSP41252 1262 aaKnown RBP8.91□□□□□ -0.98
SF3B3-209ENST00000567635 APLP1P51693 650 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 DDX46Q7L014 1031 aaKnown RBP8.91□□□□□ -0.98
SF3B3-209ENST00000567635 ZNF428Q96B54 188 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 FAM89AQ96GI7 184 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-209ENST00000567635 ATP6V0A2Q9Y487 856 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 SCN4AP35499 1836 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 WDR90Q96KV7 1748 aa8.91□□□□□ -0.98
SF3B3-209ENST00000567635 DDNO94850 711 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-209ENST00000567635 TWISTNBQ3B726 338 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-209ENST00000567635 SP8Q8IXZ3 490 aa8.9□□□□□ -0.98
SF3B3-209ENST00000567635 SMC1BQ8NDV3 1235 aa8.9□□□□□ -0.98
SF3B3-209ENST00000567635 JDP2Q8WYK2 163 aa8.9□□□□□ -0.98
SF3B3-209ENST00000567635 STK31Q9BXU1 1019 aa8.9□□□□□ -0.98
SF3B3-209ENST00000567635 DDX60Q8IY21 1712 aaKnown RBP8.9□□□□□ -0.98
SF3B3-209ENST00000567635 ABCC4O15439 1325 aa8.89□□□□□ -0.99
SF3B3-209ENST00000567635 FZD9O00144 591 aa8.89□□□□□ -0.99
SF3B3-209ENST00000567635 HSP90B1P14625 803 aaKnown RBP8.89□□□□□ -0.99
SF3B3-209ENST00000567635 SF3B3Q15393 1217 aaKnown RBP8.89□□□□□ -0.99
SF3B3-209ENST00000567635 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms