RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
RBFOX1-217ENST00000567470 RPGRQ92834 1020 aaKnown RBP23.56■■□□□ 1.36
RBFOX1-217ENST00000567470 IFT57Q9NWB7 429 aa23.55■■□□□ 1.36
RBFOX1-217ENST00000567470 HSP90AB3PQ58FF7 597 aa23.54■■□□□ 1.36
RBFOX1-217ENST00000567470 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
RBFOX1-217ENST00000567470 OLFM4Q6UX06 510 aa23.54■■□□□ 1.36
RBFOX1-217ENST00000567470 UTP14AQ9BVJ6 771 aaKnown RBP23.54■■□□□ 1.36
RBFOX1-217ENST00000567470 ZNF853P0CG23 659 aa23.53■■□□□ 1.36
RBFOX1-217ENST00000567470 GNAI1P63096 354 aa23.53■■□□□ 1.36
RBFOX1-217ENST00000567470 DBF4Q9UBU7 674 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-217ENST00000567470 FKBP4Q02790 459 aaKnown RBP eCLIP23.52■■□□□ 1.36
RBFOX1-217ENST00000567470 DPY19L2Q6NUT2 758 aa23.52■■□□□ 1.36
RBFOX1-217ENST00000567470 RTKN2Q8IZC4 609 aa23.52■■□□□ 1.36
RBFOX1-217ENST00000567470 VEGFAP15692 232 aaPredicted RBP23.51■■□□□ 1.35
RBFOX1-217ENST00000567470 WDR90Q96KV7 1748 aa23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 ANP32CO43423 234 aa23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 HOXA10P31260 410 aaPredicted RBP23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 C3orf67Q6ZVT6 689 aa23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 NLRP10Q86W26 655 aa23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 ZNF277Q9NRM2 450 aaPredicted RBP23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 RNF123Q5XPI4 1314 aa23.5■■□□□ 1.35
RBFOX1-217ENST00000567470 FSTL1Q12841 308 aa23.49■■□□□ 1.35
RBFOX1-217ENST00000567470 TCIRG1Q13488 830 aa23.49■■□□□ 1.35
RBFOX1-217ENST00000567470 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
RBFOX1-217ENST00000567470 NLRP3Q96P20 1036 aa23.49■■□□□ 1.35
RBFOX1-217ENST00000567470 MRS2Q9HD23 443 aa23.49■■□□□ 1.35
RBFOX1-217ENST00000567470 APLP1P51693 650 aa23.48■■□□□ 1.35
RBFOX1-217ENST00000567470 PLBD2Q8NHP8 589 aa23.48■■□□□ 1.35
RBFOX1-217ENST00000567470 HYPKQ9NX55 129 aa23.48■■□□□ 1.35
RBFOX1-217ENST00000567470 PPEF1O14829 653 aaPredicted RBP23.47■■□□□ 1.35
RBFOX1-217ENST00000567470 CRAMP1Q96RY5 1269 aa23.47■■□□□ 1.35
RBFOX1-217ENST00000567470 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
RBFOX1-217ENST00000567470 SNED1Q8TER0 1413 aa23.47■■□□□ 1.35
RBFOX1-217ENST00000567470 ELL2O00472 640 aaPredicted RBP23.46■■□□□ 1.35
RBFOX1-217ENST00000567470 SLC10A5Q5PT55 438 aa23.46■■□□□ 1.35
RBFOX1-217ENST00000567470 ANKRD13DQ6ZTN6 518 aa23.46■■□□□ 1.35
RBFOX1-217ENST00000567470 SMC1BQ8NDV3 1235 aa23.46■■□□□ 1.35
RBFOX1-217ENST00000567470 ZNF428Q96B54 188 aa23.46■■□□□ 1.35
RBFOX1-217ENST00000567470 LAMB2P55268 1798 aa23.45■■□□□ 1.34
RBFOX1-217ENST00000567470 SH3TC1Q8TE82 1336 aa23.45■■□□□ 1.34
RBFOX1-217ENST00000567470 DDNO94850 711 aaPredicted RBP23.45■■□□□ 1.34
RBFOX1-217ENST00000567470 CC2D2BQ6DHV5 1058 aa23.45■■□□□ 1.34
RBFOX1-217ENST00000567470 SYNE4Q8N205 404 aa23.45■■□□□ 1.34
RBFOX1-217ENST00000567470 TCERG1O14776 1098 aaKnown RBP23.44■■□□□ 1.34
RBFOX1-217ENST00000567470 HCLS1P14317 486 aaPredicted RBP23.44■■□□□ 1.34
RBFOX1-217ENST00000567470 IARSP41252 1262 aaKnown RBP23.44■■□□□ 1.34
RBFOX1-217ENST00000567470 PSMD1Q99460 953 aa23.44■■□□□ 1.34
RBFOX1-217ENST00000567470 POTECB2RU33 542 aa23.43■■□□□ 1.34
RBFOX1-217ENST00000567470 SLC51AQ86UW1 340 aa23.43■■□□□ 1.34
RBFOX1-217ENST00000567470 C8orf58Q8NAV2 365 aa23.43■■□□□ 1.34
RBFOX1-217ENST00000567470 ABCC4O15439 1325 aa23.42■■□□□ 1.34
RBFOX1-217ENST00000567470 ZNF541Q9H0D2 1346 aa23.42■■□□□ 1.34
RBFOX1-217ENST00000567470 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
RBFOX1-217ENST00000567470 GOLGA2Q08379 1002 aa23.42■■□□□ 1.34
RBFOX1-217ENST00000567470 CCDC27Q2M243 656 aa23.41■■□□□ 1.34
RBFOX1-217ENST00000567470 GRIPAP1Q4V328 841 aa23.41■■□□□ 1.34
RBFOX1-217ENST00000567470 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
RBFOX1-217ENST00000567470 ISCA1Q9BUE6 129 aa23.41■■□□□ 1.34
RBFOX1-217ENST00000567470 TMX4Q9H1E5 349 aaPredicted RBP23.41■■□□□ 1.34
RBFOX1-217ENST00000567470 RIC3Q7Z5B4 369 aa23.4■■□□□ 1.34
RBFOX1-217ENST00000567470 WWC1Q8IX03 1113 aa23.4■■□□□ 1.34
RBFOX1-217ENST00000567470 DDX60Q8IY21 1712 aaKnown RBP23.39■■□□□ 1.34
RBFOX1-217ENST00000567470 PHAXQ9H814 394 aaKnown RBP23.39■■□□□ 1.33
RBFOX1-217ENST00000567470 IQCA1LA6NCM1 817 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 CCDC30Q5VVM6 783 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 DDX46Q7L014 1031 aaKnown RBP23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 TSPYL6Q8N831 410 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 JDP2Q8WYK2 163 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 L3MBTL3Q96JM7 780 aaPredicted RBP23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 CHMP4AQ9BY43 222 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 ATP6V0A2Q9Y487 856 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 COL4A5P29400 1685 aa23.38■■□□□ 1.33
RBFOX1-217ENST00000567470 FAM89AQ96GI7 184 aa23.37■■□□□ 1.33
RBFOX1-217ENST00000567470 FZD9O00144 591 aa23.36■■□□□ 1.33
RBFOX1-217ENST00000567470 HTRA3P83110 453 aa23.36■■□□□ 1.33
RBFOX1-217ENST00000567470 RTL5Q5HYW3 569 aaPredicted RBP23.36■■□□□ 1.33
RBFOX1-217ENST00000567470 LARGE2Q8N3Y3 721 aa23.36■■□□□ 1.33
RBFOX1-217ENST00000567470 SCN4AP35499 1836 aa23.36■■□□□ 1.33
RBFOX1-217ENST00000567470 IL16Q14005 1332 aa23.34■■□□□ 1.33
RBFOX1-217ENST00000567470 BBOX1O75936 387 aa23.34■■□□□ 1.33
RBFOX1-217ENST00000567470 TRIM28Q13263 835 aaKnown RBP23.34■■□□□ 1.33
RBFOX1-217ENST00000567470 GRAPQ13588 217 aa23.34■■□□□ 1.33
RBFOX1-217ENST00000567470 GRAPLQ8TC17 118 aaPredicted RBP23.34■■□□□ 1.33
RBFOX1-217ENST00000567470 MYD88Q99836 296 aa23.34■■□□□ 1.33
RBFOX1-217ENST00000567470 PPIP5K2O43314 1243 aa23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 DDX58O95786 925 aaKnown RBP23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 POTEIP0CG38 1075 aa23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 POTEJP0CG39 1038 aa23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 TAF1DQ9H5J8 278 aaPredicted RBP23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.33
RBFOX1-217ENST00000567470 IRS4O14654 1257 aaPredicted RBP23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 CHADLQ6NUI6 762 aa23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 DPP8Q6V1X1 898 aaPredicted RBP23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 SP8Q8IXZ3 490 aa23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 GPC2Q8N158 579 aa23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 DNAJC5GQ8N7S2 189 aa23.32■■□□□ 1.32
RBFOX1-217ENST00000567470 STK31Q9BXU1 1019 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms