RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 HOXA10P31260 410 aaPredicted RBP9.8□□□□□ -0.84
GINS3-207ENST00000567400 PARP10Q53GL7 1025 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 SYNE4Q8N205 404 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 C8orf58Q8NAV2 365 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 COL4A1P02462 1669 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
GINS3-207ENST00000567400 POTECB2RU33 542 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 TOMM70O94826 608 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 HSPA6P17066 643 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 CCDC93Q567U6 631 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 NLRP10Q86W26 655 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 TSPYL6Q8N831 410 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
GINS3-207ENST00000567400 DBF4Q9UBU7 674 aaPredicted RBP9.79□□□□□ -0.84
GINS3-207ENST00000567400 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
GINS3-207ENST00000567400 GNAI1P63096 354 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 TCIRG1Q13488 830 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 CCDC27Q2M243 656 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 SLC10A5Q5PT55 438 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 PPP1R42Q7Z4L9 355 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 PLBD2Q8NHP8 589 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 TSR2Q969E8 191 aaKnown RBP9.78□□□□□ -0.84
GINS3-207ENST00000567400 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
GINS3-207ENST00000567400 UTP14AQ9BVJ6 771 aaKnown RBP9.78□□□□□ -0.84
GINS3-207ENST00000567400 ZNF277Q9NRM2 450 aaPredicted RBP9.78□□□□□ -0.84
GINS3-207ENST00000567400 TAF1P21675 1872 aa9.77□□□□□ -0.85
GINS3-207ENST00000567400 ANP32CO43423 234 aa9.77□□□□□ -0.85
GINS3-207ENST00000567400 HCLS1P14317 486 aaPredicted RBP9.77□□□□□ -0.85
GINS3-207ENST00000567400 ALDH1B1P30837 517 aa9.77□□□□□ -0.85
GINS3-207ENST00000567400 FKBP4Q02790 459 aaKnown RBP eCLIP9.77□□□□□ -0.85
GINS3-207ENST00000567400 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
GINS3-207ENST00000567400 RBM46Q8TBY0 533 aaKnown RBP9.77□□□□□ -0.85
GINS3-207ENST00000567400 RPGRQ92834 1020 aaKnown RBP9.77□□□□□ -0.85
GINS3-207ENST00000567400 ISCA1Q9BUE6 129 aa9.77□□□□□ -0.85
GINS3-207ENST00000567400 PHAXQ9H814 394 aaKnown RBP9.77□□□□□ -0.85
GINS3-207ENST00000567400 HYPKQ9NX55 129 aa9.77□□□□□ -0.85
GINS3-207ENST00000567400 RNF123Q5XPI4 1314 aa9.77□□□□□ -0.85
GINS3-207ENST00000567400 ATP5J2-PTCD1G3V325 749 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 HSP90AB3PQ58FF7 597 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 CRAMP1Q96RY5 1269 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 PCNTO95613 3336 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 ABCC4O15439 1325 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 SH3TC1Q8TE82 1336 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 ZNF541Q9H0D2 1346 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 LRRC37AA6NMS7 1700 aa9.76□□□□□ -0.85
GINS3-207ENST00000567400 DUOX1Q9NRD9 1551 aa9.75□□□□□ -0.85
GINS3-207ENST00000567400 PPEF1O14829 653 aaPredicted RBP9.75□□□□□ -0.85
GINS3-207ENST00000567400 DDNO94850 711 aaPredicted RBP9.75□□□□□ -0.85
GINS3-207ENST00000567400 VEGFAP15692 232 aaPredicted RBP9.75□□□□□ -0.85
GINS3-207ENST00000567400 RTKN2Q8IZC4 609 aa9.75□□□□□ -0.85
GINS3-207ENST00000567400 NLRP3Q96P20 1036 aa9.75□□□□□ -0.85
GINS3-207ENST00000567400 PSMD1Q99460 953 aa9.75□□□□□ -0.85
GINS3-207ENST00000567400 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
GINS3-207ENST00000567400 IL16Q14005 1332 aa9.75□□□□□ -0.85
GINS3-207ENST00000567400 LTBP1Q14766 1721 aa9.74□□□□□ -0.85
GINS3-207ENST00000567400 TRIM28Q13263 835 aaKnown RBP9.74□□□□□ -0.85
GINS3-207ENST00000567400 NCBP3Q53F19 620 aaKnown RBP9.74□□□□□ -0.85
GINS3-207ENST00000567400 FAM89AQ96GI7 184 aa9.74□□□□□ -0.85
GINS3-207ENST00000567400 RBM17Q96I25 401 aaKnown RBP9.74□□□□□ -0.85
GINS3-207ENST00000567400 L3MBTL3Q96JM7 780 aaPredicted RBP9.74□□□□□ -0.85
GINS3-207ENST00000567400 SPINK5Q9NQ38 1064 aaPredicted RBP9.74□□□□□ -0.85
GINS3-207ENST00000567400 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
GINS3-207ENST00000567400 ADAMTSL1Q8N6G6 1762 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 FZD9O00144 591 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 TCERG1O14776 1098 aaKnown RBP9.73□□□□□ -0.85
GINS3-207ENST00000567400 POTEIP0CG38 1075 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 IARSP41252 1262 aaKnown RBP9.73□□□□□ -0.85
GINS3-207ENST00000567400 HTRA3P83110 453 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 FSTL1Q12841 308 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 CC2D2BQ6DHV5 1058 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
GINS3-207ENST00000567400 ATP6V0A2Q9Y487 856 aa9.73□□□□□ -0.85
GINS3-207ENST00000567400 SCN4AP35499 1836 aa9.72□□□□□ -0.85
GINS3-207ENST00000567400 APLP1P51693 650 aa9.72□□□□□ -0.85
GINS3-207ENST00000567400 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
GINS3-207ENST00000567400 TWISTNBQ3B726 338 aaPredicted RBP9.72□□□□□ -0.85
GINS3-207ENST00000567400 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
GINS3-207ENST00000567400 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
GINS3-207ENST00000567400 DNAJC5GQ8N7S2 189 aa9.72□□□□□ -0.85
GINS3-207ENST00000567400 SMC1BQ8NDV3 1235 aa9.72□□□□□ -0.85
GINS3-207ENST00000567400 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
GINS3-207ENST00000567400 IGKV5-2P06315 115 aa9.71□□□□□ -0.86
GINS3-207ENST00000567400 GRAPQ13588 217 aa9.71□□□□□ -0.86
GINS3-207ENST00000567400 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.86
GINS3-207ENST00000567400 G2E3Q7L622 706 aa9.71□□□□□ -0.86
GINS3-207ENST00000567400 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
GINS3-207ENST00000567400 ZBTB38Q8NAP3 1195 aaPredicted RBP9.71□□□□□ -0.86
GINS3-207ENST00000567400 GRAPLQ8TC17 118 aaPredicted RBP9.71□□□□□ -0.86
GINS3-207ENST00000567400 MYD88Q99836 296 aa9.71□□□□□ -0.86
GINS3-207ENST00000567400 METTL22Q9BUU2 404 aaPredicted RBP9.71□□□□□ -0.86
GINS3-207ENST00000567400 RTFDC1Q9BY42 306 aaPredicted RBP9.71□□□□□ -0.86
GINS3-207ENST00000567400 PI4KAP2A4QPH2 592 aa9.7□□□□□ -0.86
GINS3-207ENST00000567400 IRS4O14654 1257 aaPredicted RBP9.7□□□□□ -0.86
GINS3-207ENST00000567400 BBOX1O75936 387 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms