RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 RTL5Q5HYW3 569 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-219ENST00000567399 SLC4A10Q6U841 1118 aa19.28■□□□□ 0.68
COMMD4-219ENST00000567399 CCDC191Q8NCU4 936 aa19.28■□□□□ 0.68
COMMD4-219ENST00000567399 CWC25Q9NXE8 425 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-219ENST00000567399 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
COMMD4-219ENST00000567399 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
COMMD4-219ENST00000567399 F6X3S4 739 aa19.27■□□□□ 0.68
COMMD4-219ENST00000567399 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
COMMD4-219ENST00000567399 NLRP3Q96P20 1036 aa19.27■□□□□ 0.68
COMMD4-219ENST00000567399 NRXN2Q9P2S2 1712 aa19.27■□□□□ 0.68
COMMD4-219ENST00000567399 ADCY9O60503 1353 aa19.27■□□□□ 0.68
COMMD4-219ENST00000567399 IBTKQ9P2D0 1353 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-219ENST00000567399 PXDNLA1KZ92 1463 aa19.27■□□□□ 0.67
COMMD4-219ENST00000567399 RNF123Q5XPI4 1314 aa19.26■□□□□ 0.67
COMMD4-219ENST00000567399 DALRD3Q5D0E6 543 aaKnown RBP19.26■□□□□ 0.67
COMMD4-219ENST00000567399 FAM89AQ96GI7 184 aa19.26■□□□□ 0.67
COMMD4-219ENST00000567399 ARFGEF2Q9Y6D5 1785 aa19.26■□□□□ 0.67
COMMD4-219ENST00000567399 PTPRCP08575 1304 aa19.25■□□□□ 0.67
COMMD4-219ENST00000567399 ANKRD36CQ5JPF3 1778 aa19.25■□□□□ 0.67
COMMD4-219ENST00000567399 HSP90B1P14625 803 aaKnown RBP19.25■□□□□ 0.67
COMMD4-219ENST00000567399 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
COMMD4-219ENST00000567399 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
COMMD4-219ENST00000567399 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
COMMD4-219ENST00000567399 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-219ENST00000567399 KIF13BQ9NQT8 1826 aa19.24■□□□□ 0.67
COMMD4-219ENST00000567399 GRIN3BO60391 1043 aa19.24■□□□□ 0.67
COMMD4-219ENST00000567399 HCLS1P14317 486 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-219ENST00000567399 KCNA3P22001 575 aa19.24■□□□□ 0.67
COMMD4-219ENST00000567399 CWF19L2Q2TBE0 894 aaKnown RBP19.24■□□□□ 0.67
COMMD4-219ENST00000567399 TTLL6Q8N841 843 aa19.24■□□□□ 0.67
COMMD4-219ENST00000567399 ZBTB38Q8NAP3 1195 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-219ENST00000567399 CACNA1FO60840 1977 aa19.23■□□□□ 0.67
COMMD4-219ENST00000567399 NPR1P16066 1061 aa19.23■□□□□ 0.67
COMMD4-219ENST00000567399 SLC10A5Q5PT55 438 aa19.23■□□□□ 0.67
COMMD4-219ENST00000567399 SYNE4Q8N205 404 aa19.23■□□□□ 0.67
COMMD4-219ENST00000567399 LINS1Q8NG48 757 aa19.23■□□□□ 0.67
COMMD4-219ENST00000567399 CNKSR1Q969H4 720 aa19.23■□□□□ 0.67
COMMD4-219ENST00000567399 NOB1Q9ULX3 412 aaKnown RBP19.23■□□□□ 0.67
COMMD4-219ENST00000567399 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
COMMD4-219ENST00000567399 NEURL1BA8MQ27 555 aa19.22■□□□□ 0.67
COMMD4-219ENST00000567399 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-219ENST00000567399 IGKV5-2P06315 115 aa19.22■□□□□ 0.67
COMMD4-219ENST00000567399 SRGNP10124 158 aa19.22■□□□□ 0.67
COMMD4-219ENST00000567399 STYK1Q6J9G0 422 aa19.22■□□□□ 0.67
COMMD4-219ENST00000567399 JARID2Q92833 1246 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-219ENST00000567399 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
COMMD4-219ENST00000567399 PCCAP05165 728 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-219ENST00000567399 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
COMMD4-219ENST00000567399 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
COMMD4-219ENST00000567399 FRAT1Q92837 279 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-219ENST00000567399 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
COMMD4-219ENST00000567399 SRCIN1Q9C0H9 1055 aa19.21■□□□□ 0.67
COMMD4-219ENST00000567399 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
COMMD4-219ENST00000567399 API5Q9BZZ5 524 aaKnown RBP19.2■□□□□ 0.66
COMMD4-219ENST00000567399 ZNF219Q9P2Y4 722 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-219ENST00000567399 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-219ENST00000567399 BCAR3O75815 825 aa19.19■□□□□ 0.66
COMMD4-219ENST00000567399 GCKRQ14397 625 aa19.19■□□□□ 0.66
COMMD4-219ENST00000567399 BEND3Q5T5X7 828 aa19.19■□□□□ 0.66
COMMD4-219ENST00000567399 ARHGAP27Q6ZUM4 889 aa19.19■□□□□ 0.66
COMMD4-219ENST00000567399 C9orf78Q9NZ63 289 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-219ENST00000567399 ANKRD31Q8N7Z5 1873 aa19.18■□□□□ 0.66
COMMD4-219ENST00000567399 BRPF1P55201 1214 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-219ENST00000567399 DDX46Q7L014 1031 aaKnown RBP19.18■□□□□ 0.66
COMMD4-219ENST00000567399 UBE3BQ7Z3V4 1068 aa19.18■□□□□ 0.66
COMMD4-219ENST00000567399 TMX4Q9H1E5 349 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-219ENST00000567399 PDE8AO60658 829 aa19.17■□□□□ 0.66
COMMD4-219ENST00000567399 ALDH1L1O75891 902 aa19.17■□□□□ 0.66
COMMD4-219ENST00000567399 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
COMMD4-219ENST00000567399 CRY2Q49AN0 593 aa19.16■□□□□ 0.66
COMMD4-219ENST00000567399 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
COMMD4-219ENST00000567399 C3orf67Q6ZVT6 689 aa19.16■□□□□ 0.66
COMMD4-219ENST00000567399 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
COMMD4-219ENST00000567399 RIC1Q4ADV7 1423 aa19.16■□□□□ 0.66
COMMD4-219ENST00000567399 H7C1W4 665 aa19.15■□□□□ 0.66
COMMD4-219ENST00000567399 C21orf2O43822 256 aa19.15■□□□□ 0.66
COMMD4-219ENST00000567399 ARHGAP45Q92619 1136 aa19.15■□□□□ 0.66
COMMD4-219ENST00000567399 CRAMP1Q96RY5 1269 aa19.15■□□□□ 0.66
COMMD4-219ENST00000567399 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
COMMD4-219ENST00000567399 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-219ENST00000567399 CCT4P50991 539 aaKnown RBP19.14■□□□□ 0.65
COMMD4-219ENST00000567399 CCDC152Q4G0S7 254 aa19.14■□□□□ 0.65
COMMD4-219ENST00000567399 ZKSCAN2Q63HK3 967 aa19.14■□□□□ 0.65
COMMD4-219ENST00000567399 TNRC6CQ9HCJ0 1690 aaKnown RBP19.14■□□□□ 0.65
COMMD4-219ENST00000567399 GRM8O00222 908 aa19.13■□□□□ 0.65
COMMD4-219ENST00000567399 SF3B3Q15393 1217 aaKnown RBP19.13■□□□□ 0.65
COMMD4-219ENST00000567399 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
COMMD4-219ENST00000567399 CCDC85AQ96PX6 553 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-219ENST00000567399 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-219ENST00000567399 ATF7IPQ6VMQ6 1270 aa19.12■□□□□ 0.65
COMMD4-219ENST00000567399 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
COMMD4-219ENST00000567399 PPEF1O14829 653 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-219ENST00000567399 CTSWP56202 376 aa19.11■□□□□ 0.65
COMMD4-219ENST00000567399 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
COMMD4-219ENST00000567399 CLUAP1Q96AJ1 413 aa19.11■□□□□ 0.65
COMMD4-219ENST00000567399 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
COMMD4-219ENST00000567399 DLEC1Q9Y238 1755 aa19.11■□□□□ 0.65
COMMD4-219ENST00000567399 ABCC4O15439 1325 aa19.1■□□□□ 0.65
COMMD4-219ENST00000567399 BBOX1O75936 387 aa19.1■□□□□ 0.65
COMMD4-219ENST00000567399 GRAPQ13588 217 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms