RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ARFGEF1Q9Y6D6 1849 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
RNF40-211ENST00000567365 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 RIC3Q7Z5B4 369 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 MRPL50Q8N5N7 158 aaKnown RBP15.91■□□□□ 0.14
RNF40-211ENST00000567365 SSH1Q8WYL5 1049 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 PDZRN3Q9UPQ7 1066 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 MAP3K2Q9Y2U5 619 aa15.91■□□□□ 0.14
RNF40-211ENST00000567365 FAM177BA6PVY3 158 aa15.9■□□□□ 0.14
RNF40-211ENST00000567365 ATP5J2-PTCD1G3V325 749 aa15.9■□□□□ 0.14
RNF40-211ENST00000567365 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
RNF40-211ENST00000567365 PDE6BP35913 854 aa15.9■□□□□ 0.14
RNF40-211ENST00000567365 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
RNF40-211ENST00000567365 ST5P78524 1137 aa15.9■□□□□ 0.14
RNF40-211ENST00000567365 ALDH1L2Q3SY69 923 aa15.9■□□□□ 0.14
RNF40-211ENST00000567365 DDX60Q8IY21 1712 aaKnown RBP15.9■□□□□ 0.14
RNF40-211ENST00000567365 SRGNP10124 158 aa15.89■□□□□ 0.13
RNF40-211ENST00000567365 CRY2Q49AN0 593 aa15.89■□□□□ 0.13
RNF40-211ENST00000567365 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
RNF40-211ENST00000567365 C2CD5Q86YS7 1000 aa15.89■□□□□ 0.13
RNF40-211ENST00000567365 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
RNF40-211ENST00000567365 UTP14AQ9BVJ6 771 aaKnown RBP15.89■□□□□ 0.13
RNF40-211ENST00000567365 LAMB2P55268 1798 aa15.89■□□□□ 0.13
RNF40-211ENST00000567365 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
RNF40-211ENST00000567365 MYD88Q99836 296 aa15.88■□□□□ 0.13
RNF40-211ENST00000567365 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
RNF40-211ENST00000567365 H0YIN7 160 aa15.87■□□□□ 0.13
RNF40-211ENST00000567365 FKBP5Q13451 457 aaPredicted RBP15.87■□□□□ 0.13
RNF40-211ENST00000567365 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
RNF40-211ENST00000567365 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
RNF40-211ENST00000567365 RARSP54136 660 aaKnown RBP15.86■□□□□ 0.13
RNF40-211ENST00000567365 STYK1Q6J9G0 422 aa15.86■□□□□ 0.13
RNF40-211ENST00000567365 TRMT112Q9UI30 125 aaKnown RBP15.86■□□□□ 0.13
RNF40-211ENST00000567365 SLX4Q8IY92 1834 aa15.86■□□□□ 0.13
RNF40-211ENST00000567365 SH3TC1Q8TE82 1336 aa15.86■□□□□ 0.13
RNF40-211ENST00000567365 NEURL1BA8MQ27 555 aa15.85■□□□□ 0.13
RNF40-211ENST00000567365 F6X3S4 739 aa15.85■□□□□ 0.13
RNF40-211ENST00000567365 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
RNF40-211ENST00000567365 MASTLQ96GX5 879 aa15.85■□□□□ 0.13
RNF40-211ENST00000567365 CWC25Q9NXE8 425 aaPredicted RBP15.85■□□□□ 0.13
RNF40-211ENST00000567365 GRIN3BO60391 1043 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
RNF40-211ENST00000567365 GTF2E1P29083 439 aaPredicted RBP15.84■□□□□ 0.13
RNF40-211ENST00000567365 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
RNF40-211ENST00000567365 DALRD3Q5D0E6 543 aaKnown RBP15.84■□□□□ 0.13
RNF40-211ENST00000567365 BEND3Q5T5X7 828 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 TTLL6Q8N841 843 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 ZBTB38Q8NAP3 1195 aaPredicted RBP15.84■□□□□ 0.13
RNF40-211ENST00000567365 LINS1Q8NG48 757 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 WWC3Q9ULE0 1092 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 PTPRCP08575 1304 aa15.84■□□□□ 0.13
RNF40-211ENST00000567365 CACNA1SQ13698 1873 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 NPHP1O15259 732 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 HCLS1P14317 486 aaPredicted RBP15.83■□□□□ 0.12
RNF40-211ENST00000567365 NPR1P16066 1061 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 CASP7P55210 303 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 C7orf43Q8WVR3 580 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 BCS1LQ9Y276 419 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 SNED1Q8TER0 1413 aa15.83■□□□□ 0.12
RNF40-211ENST00000567365 H7C1W4 665 aa15.82■□□□□ 0.12
RNF40-211ENST00000567365 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
RNF40-211ENST00000567365 GCKRQ14397 625 aa15.82■□□□□ 0.12
RNF40-211ENST00000567365 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
RNF40-211ENST00000567365 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
RNF40-211ENST00000567365 COL4A1P02462 1669 aa15.81■□□□□ 0.12
RNF40-211ENST00000567365 SF3B3Q15393 1217 aaKnown RBP15.81■□□□□ 0.12
RNF40-211ENST00000567365 FER1L6Q2WGJ9 1857 aa15.81■□□□□ 0.12
RNF40-211ENST00000567365 CNKSR1Q969H4 720 aa15.81■□□□□ 0.12
RNF40-211ENST00000567365 ZNF622Q969S3 477 aaKnown RBP eCLIP15.81■□□□□ 0.126e-10■■□□□ 13.1
RNF40-211ENST00000567365 NLRP3Q96P20 1036 aa15.81■□□□□ 0.12
RNF40-211ENST00000567365 CRAMP1Q96RY5 1269 aa15.81■□□□□ 0.12
RNF40-211ENST00000567365 IRS4O14654 1257 aaPredicted RBP15.8■□□□□ 0.12
RNF40-211ENST00000567365 PRPF40BQ6NWY9 871 aaKnown RBP15.8■□□□□ 0.12
RNF40-211ENST00000567365 MYH3P11055 1940 aa15.79■□□□□ 0.12
RNF40-211ENST00000567365 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
RNF40-211ENST00000567365 TAF1P21675 1872 aa15.79■□□□□ 0.12
RNF40-211ENST00000567365 SBF1O95248 1867 aa15.78■□□□□ 0.12
RNF40-211ENST00000567365 BCAR3O75815 825 aa15.78■□□□□ 0.12
RNF40-211ENST00000567365 ALDH1L1O75891 902 aa15.78■□□□□ 0.12
RNF40-211ENST00000567365 ALDH1B1P30837 517 aa15.78■□□□□ 0.12
RNF40-211ENST00000567365 RTL5Q5HYW3 569 aaPredicted RBP15.78■□□□□ 0.12
RNF40-211ENST00000567365 ARHGAP45Q92619 1136 aa15.78■□□□□ 0.12
RNF40-211ENST00000567365 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
RNF40-211ENST00000567365 UTYO14607 1347 aa15.77■□□□□ 0.12
RNF40-211ENST00000567365 ABCC4O15439 1325 aa15.77■□□□□ 0.12
RNF40-211ENST00000567365 ZNF526Q8TF50 670 aaPredicted RBP15.77■□□□□ 0.12
RNF40-211ENST00000567365 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.12
RNF40-211ENST00000567365 LRRC37AA6NMS7 1700 aa15.77■□□□□ 0.11
RNF40-211ENST00000567365 KIF16BQ96L93 1317 aa15.76■□□□□ 0.11
RNF40-211ENST00000567365 NFKBIEO00221 500 aa15.76■□□□□ 0.11
RNF40-211ENST00000567365 PDE8AO60658 829 aa15.76■□□□□ 0.11
RNF40-211ENST00000567365 PRELPP51888 382 aa15.76■□□□□ 0.11
RNF40-211ENST00000567365 UBE3BQ7Z3V4 1068 aa15.76■□□□□ 0.11
RNF40-211ENST00000567365 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
RNF40-211ENST00000567365 RBM17Q96I25 401 aaKnown RBP15.76■□□□□ 0.11
RNF40-211ENST00000567365 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
RNF40-211ENST00000567365 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms