RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 SLC10A5Q5PT55 438 aa18.59■□□□□ 0.57
COMMD4-216ENST00000567023 CC2D2BQ6DHV5 1058 aa18.59■□□□□ 0.57
COMMD4-216ENST00000567023 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
COMMD4-216ENST00000567023 SNED1Q8TER0 1413 aa18.58■□□□□ 0.57
COMMD4-216ENST00000567023 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
COMMD4-216ENST00000567023 HSP90AB3PQ58FF7 597 aa18.58■□□□□ 0.56
COMMD4-216ENST00000567023 OLFM4Q6UX06 510 aa18.58■□□□□ 0.56
COMMD4-216ENST00000567023 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
COMMD4-216ENST00000567023 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
COMMD4-216ENST00000567023 GRIPAP1Q4V328 841 aa18.57■□□□□ 0.56
COMMD4-216ENST00000567023 NECTIN2Q92692 538 aa18.57■□□□□ 0.56
COMMD4-216ENST00000567023 RPGRQ92834 1020 aaKnown RBP18.57■□□□□ 0.56
COMMD4-216ENST00000567023 CRAMP1Q96RY5 1269 aa18.57■□□□□ 0.56
COMMD4-216ENST00000567023 PSMD1Q99460 953 aa18.57■□□□□ 0.56
COMMD4-216ENST00000567023 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
COMMD4-216ENST00000567023 PCNTO95613 3336 aa18.57■□□□□ 0.56
COMMD4-216ENST00000567023 APAF1O14727 1248 aa18.56■□□□□ 0.56
COMMD4-216ENST00000567023 DDNO94850 711 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-216ENST00000567023 TCIRG1Q13488 830 aa18.56■□□□□ 0.56
COMMD4-216ENST00000567023 NLRP3Q96P20 1036 aa18.56■□□□□ 0.56
COMMD4-216ENST00000567023 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
COMMD4-216ENST00000567023 AIMP1Q12904 312 aaKnown RBP18.55■□□□□ 0.56
COMMD4-216ENST00000567023 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
COMMD4-216ENST00000567023 NLRP10Q86W26 655 aa18.55■□□□□ 0.56
COMMD4-216ENST00000567023 RBM17Q96I25 401 aaKnown RBP18.55■□□□□ 0.56
COMMD4-216ENST00000567023 ZNF277Q9NRM2 450 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-216ENST00000567023 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
COMMD4-216ENST00000567023 DBF4Q9UBU7 674 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-216ENST00000567023 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
COMMD4-216ENST00000567023 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
COMMD4-216ENST00000567023 C3orf67Q6ZVT6 689 aa18.54■□□□□ 0.56
COMMD4-216ENST00000567023 SYNE4Q8N205 404 aa18.54■□□□□ 0.56
COMMD4-216ENST00000567023 L3MBTL3Q96JM7 780 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-216ENST00000567023 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
COMMD4-216ENST00000567023 FZD9O00144 591 aa18.53■□□□□ 0.56
COMMD4-216ENST00000567023 DUSP27Q5VZP5 1158 aa18.53■□□□□ 0.56
COMMD4-216ENST00000567023 PLBD2Q8NHP8 589 aa18.53■□□□□ 0.56
COMMD4-216ENST00000567023 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
COMMD4-216ENST00000567023 IQCA1LA6NCM1 817 aa18.52■□□□□ 0.56
COMMD4-216ENST00000567023 GNAI1P63096 354 aa18.52■□□□□ 0.56
COMMD4-216ENST00000567023 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
COMMD4-216ENST00000567023 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
COMMD4-216ENST00000567023 PPEF1O14829 653 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-216ENST00000567023 HTRA3P83110 453 aa18.5■□□□□ 0.55
COMMD4-216ENST00000567023 KLRG1Q96E93 195 aa18.5■□□□□ 0.55
COMMD4-216ENST00000567023 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
COMMD4-216ENST00000567023 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
COMMD4-216ENST00000567023 SCN4AP35499 1836 aa18.49■□□□□ 0.55
COMMD4-216ENST00000567023 BBOX1O75936 387 aa18.49■□□□□ 0.55
COMMD4-216ENST00000567023 ISCA1Q9BUE6 129 aa18.49■□□□□ 0.55
COMMD4-216ENST00000567023 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-216ENST00000567023 ATP6V0A2Q9Y487 856 aa18.49■□□□□ 0.55
COMMD4-216ENST00000567023 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
COMMD4-216ENST00000567023 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-216ENST00000567023 TRIM28Q13263 835 aaKnown RBP18.48■□□□□ 0.55
COMMD4-216ENST00000567023 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
COMMD4-216ENST00000567023 CHADLQ6NUI6 762 aa18.48■□□□□ 0.55
COMMD4-216ENST00000567023 JMYQ8N9B5 988 aa18.48■□□□□ 0.55
COMMD4-216ENST00000567023 JDP2Q8WYK2 163 aa18.48■□□□□ 0.55
COMMD4-216ENST00000567023 VPS33BQ9H267 617 aa18.48■□□□□ 0.55
COMMD4-216ENST00000567023 ABCC4O15439 1325 aa18.48■□□□□ 0.55
COMMD4-216ENST00000567023 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
COMMD4-216ENST00000567023 GPC2Q8N158 579 aa18.47■□□□□ 0.55
COMMD4-216ENST00000567023 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-216ENST00000567023 POTEIP0CG38 1075 aa18.46■□□□□ 0.55
COMMD4-216ENST00000567023 POTEJP0CG39 1038 aa18.46■□□□□ 0.55
COMMD4-216ENST00000567023 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
COMMD4-216ENST00000567023 LDHDQ86WU2 507 aa18.46■□□□□ 0.55
COMMD4-216ENST00000567023 SP8Q8IXZ3 490 aa18.46■□□□□ 0.55
COMMD4-216ENST00000567023 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-216ENST00000567023 CHMP4AQ9BY43 222 aa18.46■□□□□ 0.55
COMMD4-216ENST00000567023 COL4A5P29400 1685 aa18.45■□□□□ 0.54
COMMD4-216ENST00000567023 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
COMMD4-216ENST00000567023 C8orf58Q8NAV2 365 aa18.45■□□□□ 0.54
COMMD4-216ENST00000567023 HACL1Q9UJ83 578 aa18.45■□□□□ 0.54
COMMD4-216ENST00000567023 LAMB2P55268 1798 aa18.45■□□□□ 0.54
COMMD4-216ENST00000567023 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
COMMD4-216ENST00000567023 EIF6P56537 245 aaKnown RBP18.44■□□□□ 0.54
COMMD4-216ENST00000567023 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
COMMD4-216ENST00000567023 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
COMMD4-216ENST00000567023 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-216ENST00000567023 ATP5J2-PTCD1G3V325 749 aa18.43■□□□□ 0.54
COMMD4-216ENST00000567023 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-216ENST00000567023 EPHX2P34913 555 aa18.43■□□□□ 0.54
COMMD4-216ENST00000567023 GRAPQ13588 217 aa18.43■□□□□ 0.54
COMMD4-216ENST00000567023 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
COMMD4-216ENST00000567023 TMC4Q7Z404 712 aa18.43■□□□□ 0.54
COMMD4-216ENST00000567023 PNMA8AQ86V59 439 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-216ENST00000567023 SUPT20HQ8NEM7 779 aa18.43■□□□□ 0.54
COMMD4-216ENST00000567023 GRAPLQ8TC17 118 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-216ENST00000567023 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
COMMD4-216ENST00000567023 PHAXQ9H814 394 aaKnown RBP18.43■□□□□ 0.54
COMMD4-216ENST00000567023 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
COMMD4-216ENST00000567023 RIC3Q7Z5B4 369 aa18.42■□□□□ 0.54
COMMD4-216ENST00000567023 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
COMMD4-216ENST00000567023 CCDC30Q5VVM6 783 aa18.41■□□□□ 0.54
COMMD4-216ENST00000567023 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
COMMD4-216ENST00000567023 PASKQ96RG2 1323 aa18.41■□□□□ 0.54
COMMD4-216ENST00000567023 DDX60Q8IY21 1712 aaKnown RBP18.4■□□□□ 0.54
COMMD4-216ENST00000567023 PPIP5K2O43314 1243 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms