RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 SYNMO15061 1565 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 FAM135BQ49AJ0 1406 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 GOLGA6L10A0A0M3HER8 536 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 IVLP07476 585 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 CASQ1P31415 396 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 ZC3H6P61129 1189 aaKnown RBP5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 FAM196AQ6ZSG2 479 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 TBC1D9Q6ZT07 1266 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 VPS36Q86VN1 386 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 ECHDC1Q9NTX5 307 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 HYPKQ9NX55 129 aa5.05□□□□□ -1.6
LPCAT2-208ENST00000566915 RNF17Q9BXT8 1623 aaKnown RBP5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 GOLIM4O00461 696 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 SSFA2P28290 1259 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 CETN2P41208 172 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 SPAG1Q07617 926 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 FKBP15Q5T1M5 1219 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 FAM200AQ8TCP9 573 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 FBXW7Q969H0 707 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 RAB34Q9BZG1 259 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 CNNM1Q9NRU3 951 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 SPATA31D1Q6ZQQ2 1576 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 PPP1R12BO60237 982 aaPredicted RBP5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 PAFAH1B1P43034 410 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 KRT222Q8N1A0 295 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 DNAAF4Q8WXU2 420 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 DBF4Q9UBU7 674 aaPredicted RBP5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 KIDINS220Q9ULH0 1771 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 RNF123Q5XPI4 1314 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 YEATS4O95619 227 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 EZRP15311 586 aaKnown RBP5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 RAB3GAP1Q15042 981 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 CTR9Q6PD62 1173 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 KIAA1328Q86T90 577 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 UNC5CLQ8IV45 518 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 FAM114A1Q8IWE2 563 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 FLAD1Q8NFF5 587 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 DDX12PQ92771 950 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 CCDC102AQ96A19 550 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 C8orf76Q96K31 380 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 CTAGE1Q96RT6 745 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 ADAMTSL3P82987 1691 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 ADCY5O95622 1261 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 KRT18P05783 430 aaKnown RBP5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 ZNF165P49910 485 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 EIF5P55010 431 aaKnown RBP5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 ZSCAN23Q3MJ62 389 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 HSP90AB3PQ58FF7 597 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 AFF2P51816 1311 aa5.04□□□□□ -1.6
LPCAT2-208ENST00000566915 A0A087WZG4 1122 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 BTBD11A6QL63 1104 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 ZSCAN22P10073 491 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 TUBB2AQ13885 445 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 C20orf194Q5TEA3 1177 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 TUBB2BQ9BVA1 445 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 THRAP3Q9Y2W1 955 aaKnown RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 PRAG1Q86YV5 1406 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 CKAP4Q07065 602 aaKnown RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 ANKRD44Q8N8A2 993 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 ANKRD24Q8TF21 1146 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 RAD50Q92878 1312 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 A6NNZ2 444 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 ZFYP08048 801 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 XRCC6P12956 609 aaKnown RBP eCLIP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 PRKCSHP14314 528 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 DESP17661 470 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 FOSBP53539 338 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 CABP4P57796 275 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 TUBB8Q3ZCM7 444 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 C8orf34Q49A92 452 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 KCNG4Q8TDN1 519 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 TSG101Q99816 390 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 V9GYY5 206 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 ACEP12821 1306 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 BRPF1P55201 1214 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 CEBPZQ03701 1054 aaKnown RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 SNW1Q13573 536 aaKnown RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 NOLC1Q14978 699 aaKnown RBP eCLIP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 SEPT7Q16181 437 aaKnown RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 KIF4BQ2VIQ3 1234 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 PRPF40BQ6NWY9 871 aaKnown RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 USP25Q9UHP3 1055 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 TTC41PQ6P2S7 1318 aa5.03□□□□□ -1.6
LPCAT2-208ENST00000566915 URI1O94763 535 aaPredicted RBP5.03□□□□□ -1.61
LPCAT2-208ENST00000566915 AMPD3Q01432 767 aa5.03□□□□□ -1.61
LPCAT2-208ENST00000566915 STK3Q13188 491 aa5.03□□□□□ -1.61
LPCAT2-208ENST00000566915 TIGD1Q96MW7 591 aa5.03□□□□□ -1.61
LPCAT2-208ENST00000566915 ALS2CR12Q96Q35 445 aa5.03□□□□□ -1.61
LPCAT2-208ENST00000566915 EXOC6BQ9Y2D4 811 aa5.03□□□□□ -1.61
LPCAT2-208ENST00000566915 SBNO1A3KN83 1393 aa5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 GCOM1H8Y6P7 765 aaPredicted RBP5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 ALDH1L1O75891 902 aa5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 MYZAPP0CAP1 466 aa5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 POTEJP0CG39 1038 aa5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 FAM193AP78312 1265 aa5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 IFI16Q16666 785 aaKnown RBP5.02□□□□□ -1.61
LPCAT2-208ENST00000566915 CEP135Q66GS9 1140 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms