RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 PHAXQ9H814 394 aaKnown RBP18.61■□□□□ 0.57
COMMD4-215ENST00000566843 DDX19AQ9NUU7 478 aaKnown RBP18.61■□□□□ 0.57
COMMD4-215ENST00000566843 PDCP20941 246 aa18.61■□□□□ 0.57
COMMD4-215ENST00000566843 ZSCAN25Q6NSZ9 544 aa18.61■□□□□ 0.57
COMMD4-215ENST00000566843 CTNNA3Q9UI47 895 aa18.61■□□□□ 0.57
COMMD4-215ENST00000566843 PAXBP1Q9Y5B6 917 aa18.61■□□□□ 0.57
COMMD4-215ENST00000566843 A0A0U1RQG5 324 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-215ENST00000566843 ANO6Q4KMQ2 910 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 SCAND2PQ9GZW5 306 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-215ENST00000566843 ALDH8A1Q9H2A2 487 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-215ENST00000566843 TNMDQ9H2S6 317 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 TPCN1Q9ULQ1 816 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 CDC25BP30305 580 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 NECAB1Q8N987 351 aa18.6■□□□□ 0.57
COMMD4-215ENST00000566843 NWD1Q149M9 1564 aa18.59■□□□□ 0.57
COMMD4-215ENST00000566843 NBPF7P0C2Y1 421 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-215ENST00000566843 LRMPQ12912 555 aa18.59■□□□□ 0.57
COMMD4-215ENST00000566843 MTX1Q13505 466 aa18.59■□□□□ 0.57
COMMD4-215ENST00000566843 SNRKQ9NRH2 765 aa18.59■□□□□ 0.57
COMMD4-215ENST00000566843 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
COMMD4-215ENST00000566843 TNNT1P13805 278 aa18.58■□□□□ 0.57
COMMD4-215ENST00000566843 ZKSCAN1P17029 563 aaPredicted RBP18.58■□□□□ 0.57
COMMD4-215ENST00000566843 CAMK4Q16566 473 aa18.58■□□□□ 0.57
COMMD4-215ENST00000566843 BEND3Q5T5X7 828 aa18.58■□□□□ 0.57
COMMD4-215ENST00000566843 ECHDC1Q9NTX5 307 aa18.58■□□□□ 0.57
COMMD4-215ENST00000566843 CGNQ9P2M7 1197 aaKnown RBP18.58■□□□□ 0.57
COMMD4-215ENST00000566843 NRBP1Q9UHY1 535 aa18.58■□□□□ 0.57
COMMD4-215ENST00000566843 NPHP3Q7Z494 1330 aa18.58■□□□□ 0.57
COMMD4-215ENST00000566843 SOX12O15370 315 aa18.58■□□□□ 0.56
COMMD4-215ENST00000566843 DTNBO60941 627 aa18.58■□□□□ 0.56
COMMD4-215ENST00000566843 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
COMMD4-215ENST00000566843 GABPB1Q06547 395 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-215ENST00000566843 MAP4K1Q92918 833 aa18.57■□□□□ 0.56
COMMD4-215ENST00000566843 EVI5LQ96CN4 794 aa18.57■□□□□ 0.56
COMMD4-215ENST00000566843 RBM8AQ9Y5S9 174 aaKnown RBP18.57■□□□□ 0.56
COMMD4-215ENST00000566843 PSMA5P28066 241 aa18.57■□□□□ 0.56
COMMD4-215ENST00000566843 AMPHP49418 695 aa18.57■□□□□ 0.56
COMMD4-215ENST00000566843 CKAP2LQ8IYA6 745 aa18.57■□□□□ 0.56
COMMD4-215ENST00000566843 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-215ENST00000566843 TRIM5Q9C035 493 aa18.57■□□□□ 0.56
COMMD4-215ENST00000566843 DDX41Q9UJV9 622 aaKnown RBP18.57■□□□□ 0.56
COMMD4-215ENST00000566843 CAVIN2O95810 425 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
COMMD4-215ENST00000566843 LEO1Q8WVC0 666 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-215ENST00000566843 ANKRD1Q15327 319 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 FERMT3Q86UX7 667 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 DRC7Q8IY82 874 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 SPATA32Q96LK8 384 aa18.56■□□□□ 0.56
COMMD4-215ENST00000566843 GIGYF1O75420 1035 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-215ENST00000566843 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
COMMD4-215ENST00000566843 GPATCH3Q96I76 525 aa18.55■□□□□ 0.56
COMMD4-215ENST00000566843 MORC2Q9Y6X9 1032 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-215ENST00000566843 HIP1O00291 1037 aa18.54■□□□□ 0.56
COMMD4-215ENST00000566843 SLC27A2O14975 620 aa18.54■□□□□ 0.56
COMMD4-215ENST00000566843 PROSER2Q86WR7 435 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-215ENST00000566843 CCDC112Q8NEF3 446 aa18.54■□□□□ 0.56
COMMD4-215ENST00000566843 CACTINQ8WUQ7 758 aaKnown RBP18.54■□□□□ 0.56
COMMD4-215ENST00000566843 CHMP3Q9Y3E7 222 aa18.54■□□□□ 0.56
COMMD4-215ENST00000566843 HOXB7P09629 217 aa18.54■□□□□ 0.56
COMMD4-215ENST00000566843 SARM1Q6SZW1 724 aa18.54■□□□□ 0.56
COMMD4-215ENST00000566843 GOLGA6L4A6NEF3 574 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 ZNF165P49910 485 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-215ENST00000566843 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
COMMD4-215ENST00000566843 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-215ENST00000566843 TAF3Q5VWG9 929 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 PGBD1Q96JS3 809 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 PIK3C2AO00443 1686 aa18.53■□□□□ 0.56
COMMD4-215ENST00000566843 NEMFO60524 1076 aa18.52■□□□□ 0.56
COMMD4-215ENST00000566843 TPD52L1Q16890 204 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-215ENST00000566843 CCDC144BQ3MJ40 725 aa18.52■□□□□ 0.56
COMMD4-215ENST00000566843 LARP1Q6PKG0 1096 aaKnown RBP18.52■□□□□ 0.56
COMMD4-215ENST00000566843 CCDC144CPQ8IYA2 1237 aa18.52■□□□□ 0.56
COMMD4-215ENST00000566843 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
COMMD4-215ENST00000566843 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
COMMD4-215ENST00000566843 STRCQ7RTU9 1775 aa18.52■□□□□ 0.56
COMMD4-215ENST00000566843 RPS6KB1P23443 525 aa18.52■□□□□ 0.55
COMMD4-215ENST00000566843 PDE4CQ08493 712 aa18.52■□□□□ 0.55
COMMD4-215ENST00000566843 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.55
COMMD4-215ENST00000566843 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.55
COMMD4-215ENST00000566843 PI4KAP2A4QPH2 592 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 NR1I2O75469 434 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-215ENST00000566843 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 PI4KAP1Q8N8J0 262 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 JCADQ9P266 1359 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 ADCY9O60503 1353 aa18.51■□□□□ 0.55
COMMD4-215ENST00000566843 IFIT2P09913 472 aaKnown RBP18.51■□□□□ 0.55
COMMD4-215ENST00000566843 EIF4A1P60842 406 aaKnown RBP18.51■□□□□ 0.55
COMMD4-215ENST00000566843 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-215ENST00000566843 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms