RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 NYXQ9GZU5 481 aa17.56■□□□□ 0.4
SPG7-215ENST00000566682 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
SPG7-215ENST00000566682 ATXN8OSP0DMR3 200 aa17.55■□□□□ 0.4
SPG7-215ENST00000566682 YBX3P16989 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
SPG7-215ENST00000566682 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
SPG7-215ENST00000566682 PDE6BP35913 854 aa17.55■□□□□ 0.4
SPG7-215ENST00000566682 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
SPG7-215ENST00000566682 NUTM1Q86Y26 1132 aa17.55■□□□□ 0.4
SPG7-215ENST00000566682 NLRP10Q86W26 655 aa17.54■□□□□ 0.4
SPG7-215ENST00000566682 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
SPG7-215ENST00000566682 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
SPG7-215ENST00000566682 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 ATP5J2-PTCD1G3V325 749 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 H0YIN7 160 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 NTSR2O95665 410 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 FLIIQ13045 1269 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 ERFEQ4G0M1 354 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 KSR2Q6VAB6 950 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 C2CD5Q86YS7 1000 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
SPG7-215ENST00000566682 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
SPG7-215ENST00000566682 MYD88Q99836 296 aa17.52■□□□□ 0.4
SPG7-215ENST00000566682 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
SPG7-215ENST00000566682 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.4
SPG7-215ENST00000566682 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
SPG7-215ENST00000566682 BCS1LQ9Y276 419 aa17.52■□□□□ 0.4
SPG7-215ENST00000566682 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
SPG7-215ENST00000566682 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
SPG7-215ENST00000566682 ADCY9O60503 1353 aa17.51■□□□□ 0.39
SPG7-215ENST00000566682 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
SPG7-215ENST00000566682 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
SPG7-215ENST00000566682 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
SPG7-215ENST00000566682 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
SPG7-215ENST00000566682 ABCC12Q96J65 1359 aa17.5■□□□□ 0.39
SPG7-215ENST00000566682 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
SPG7-215ENST00000566682 ARFGEF1Q9Y6D6 1849 aa17.49■□□□□ 0.39
SPG7-215ENST00000566682 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
SPG7-215ENST00000566682 GRIN3BO60391 1043 aa17.49■□□□□ 0.39
SPG7-215ENST00000566682 SRGNP10124 158 aa17.49■□□□□ 0.39
SPG7-215ENST00000566682 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
SPG7-215ENST00000566682 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
SPG7-215ENST00000566682 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPG7-215ENST00000566682 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
SPG7-215ENST00000566682 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
SPG7-215ENST00000566682 CT47B1P0C2W7 299 aaPredicted RBP17.48■□□□□ 0.39
SPG7-215ENST00000566682 SLC10A5Q5PT55 438 aa17.48■□□□□ 0.39
SPG7-215ENST00000566682 MRPL50Q8N5N7 158 aaKnown RBP17.48■□□□□ 0.39
SPG7-215ENST00000566682 TTLL6Q8N841 843 aa17.48■□□□□ 0.39
SPG7-215ENST00000566682 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
SPG7-215ENST00000566682 CHD4Q14839 1912 aa17.47■□□□□ 0.39
SPG7-215ENST00000566682 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
SPG7-215ENST00000566682 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
SPG7-215ENST00000566682 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
SPG7-215ENST00000566682 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
SPG7-215ENST00000566682 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
SPG7-215ENST00000566682 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 NPR1P16066 1061 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 STYK1Q6J9G0 422 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 DNAAF4Q8WXU2 420 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
SPG7-215ENST00000566682 LAMB2P55268 1798 aa17.45■□□□□ 0.38
SPG7-215ENST00000566682 DDX60Q8IY21 1712 aaKnown RBP17.45■□□□□ 0.38
SPG7-215ENST00000566682 F6X3S4 739 aa17.45■□□□□ 0.38
SPG7-215ENST00000566682 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
SPG7-215ENST00000566682 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
SPG7-215ENST00000566682 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
SPG7-215ENST00000566682 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
SPG7-215ENST00000566682 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
SPG7-215ENST00000566682 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
SPG7-215ENST00000566682 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
SPG7-215ENST00000566682 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
SPG7-215ENST00000566682 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
SPG7-215ENST00000566682 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
SPG7-215ENST00000566682 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
SPG7-215ENST00000566682 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
SPG7-215ENST00000566682 UTRNP46939 3433 aa17.43■□□□□ 0.38
SPG7-215ENST00000566682 PCCAP05165 728 aaPredicted RBP17.42■□□□□ 0.38
SPG7-215ENST00000566682 ALDH1B1P30837 517 aa17.42■□□□□ 0.38
SPG7-215ENST00000566682 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
SPG7-215ENST00000566682 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
SPG7-215ENST00000566682 JARID2Q92833 1246 aaPredicted RBP17.42■□□□□ 0.38
SPG7-215ENST00000566682 RPGRQ92834 1020 aaKnown RBP17.42■□□□□ 0.38
SPG7-215ENST00000566682 IRS4O14654 1257 aaPredicted RBP17.41■□□□□ 0.38
SPG7-215ENST00000566682 HOXA10P31260 410 aaPredicted RBP17.41■□□□□ 0.38
SPG7-215ENST00000566682 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
SPG7-215ENST00000566682 BEND3Q5T5X7 828 aa17.41■□□□□ 0.38
SPG7-215ENST00000566682 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
SPG7-215ENST00000566682 PTPRCP08575 1304 aa17.41■□□□□ 0.38
SPG7-215ENST00000566682 C21orf2O43822 256 aa17.4■□□□□ 0.38
SPG7-215ENST00000566682 GCKRQ14397 625 aa17.4■□□□□ 0.38
SPG7-215ENST00000566682 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
SPG7-215ENST00000566682 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
SPG7-215ENST00000566682 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
SPG7-215ENST00000566682 CRAMP1Q96RY5 1269 aa17.39■□□□□ 0.37
SPG7-215ENST00000566682 TAF1P21675 1872 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms