RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
GDPD3-204ENST00000566434 METTL22Q9BUU2 404 aaPredicted RBP16.53■□□□□ 0.24
GDPD3-204ENST00000566434 PIM2Q9P1W9 311 aa16.53■□□□□ 0.24
GDPD3-204ENST00000566434 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
GDPD3-204ENST00000566434 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
GDPD3-204ENST00000566434 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
GDPD3-204ENST00000566434 ADCY9O60503 1353 aa16.52■□□□□ 0.24
GDPD3-204ENST00000566434 DLEC1Q9Y238 1755 aa16.52■□□□□ 0.24
GDPD3-204ENST00000566434 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
GDPD3-204ENST00000566434 BCL2L13Q9BXK5 485 aa16.52■□□□□ 0.24
GDPD3-204ENST00000566434 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
GDPD3-204ENST00000566434 RNF123Q5XPI4 1314 aa16.51■□□□□ 0.23
GDPD3-204ENST00000566434 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
GDPD3-204ENST00000566434 BRCA1P38398 1863 aaKnown RBP16.51■□□□□ 0.23
GDPD3-204ENST00000566434 TNRC6CQ9HCJ0 1690 aaKnown RBP16.51■□□□□ 0.23
GDPD3-204ENST00000566434 YBX3P16989 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
GDPD3-204ENST00000566434 DALRD3Q5D0E6 543 aaKnown RBP16.51■□□□□ 0.23
GDPD3-204ENST00000566434 DNAAF4Q8WXU2 420 aa16.51■□□□□ 0.23
GDPD3-204ENST00000566434 SSH1Q8WYL5 1049 aa16.51■□□□□ 0.23
GDPD3-204ENST00000566434 GRIN3BO60391 1043 aa16.5■□□□□ 0.23
GDPD3-204ENST00000566434 ALDH1L2Q3SY69 923 aa16.5■□□□□ 0.23
GDPD3-204ENST00000566434 MRPL50Q8N5N7 158 aaKnown RBP16.5■□□□□ 0.23
GDPD3-204ENST00000566434 CWC25Q9NXE8 425 aaPredicted RBP16.5■□□□□ 0.23
GDPD3-204ENST00000566434 KCNA3P22001 575 aa16.49■□□□□ 0.23
GDPD3-204ENST00000566434 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
GDPD3-204ENST00000566434 RTL5Q5HYW3 569 aaPredicted RBP16.49■□□□□ 0.23
GDPD3-204ENST00000566434 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
GDPD3-204ENST00000566434 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
GDPD3-204ENST00000566434 MASTLQ96GX5 879 aa16.49■□□□□ 0.23
GDPD3-204ENST00000566434 RIC1Q4ADV7 1423 aa16.48■□□□□ 0.23
GDPD3-204ENST00000566434 F6X3S4 739 aa16.48■□□□□ 0.23
GDPD3-204ENST00000566434 NPR1P16066 1061 aa16.48■□□□□ 0.23
GDPD3-204ENST00000566434 TRIM28Q13263 835 aaKnown RBP16.48■□□□□ 0.23
GDPD3-204ENST00000566434 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
GDPD3-204ENST00000566434 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
GDPD3-204ENST00000566434 NLRP3Q96P20 1036 aa16.48■□□□□ 0.23
GDPD3-204ENST00000566434 SRGNP10124 158 aa16.47■□□□□ 0.23
GDPD3-204ENST00000566434 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
GDPD3-204ENST00000566434 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
GDPD3-204ENST00000566434 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
GDPD3-204ENST00000566434 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
GDPD3-204ENST00000566434 CNKSR1Q969H4 720 aa16.47■□□□□ 0.23
GDPD3-204ENST00000566434 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
GDPD3-204ENST00000566434 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
GDPD3-204ENST00000566434 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
GDPD3-204ENST00000566434 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
GDPD3-204ENST00000566434 ZBTB38Q8NAP3 1195 aaPredicted RBP16.46■□□□□ 0.23
GDPD3-204ENST00000566434 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
GDPD3-204ENST00000566434 PTPRCP08575 1304 aa16.45■□□□□ 0.22
GDPD3-204ENST00000566434 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 NEURL1BA8MQ27 555 aa16.45■□□□□ 0.22
GDPD3-204ENST00000566434 IRS4O14654 1257 aaPredicted RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 PCCAP05165 728 aaPredicted RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
GDPD3-204ENST00000566434 LINS1Q8NG48 757 aa16.45■□□□□ 0.22
GDPD3-204ENST00000566434 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
GDPD3-204ENST00000566434 LAMB2P55268 1798 aa16.45■□□□□ 0.22
GDPD3-204ENST00000566434 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
GDPD3-204ENST00000566434 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
GDPD3-204ENST00000566434 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
GDPD3-204ENST00000566434 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
GDPD3-204ENST00000566434 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
GDPD3-204ENST00000566434 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
GDPD3-204ENST00000566434 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
GDPD3-204ENST00000566434 GCKRQ14397 625 aa16.42■□□□□ 0.22
GDPD3-204ENST00000566434 UBE3BQ7Z3V4 1068 aa16.42■□□□□ 0.22
GDPD3-204ENST00000566434 SRCIN1Q9C0H9 1055 aa16.42■□□□□ 0.22
GDPD3-204ENST00000566434 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
GDPD3-204ENST00000566434 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
GDPD3-204ENST00000566434 CHD4Q14839 1912 aa16.41■□□□□ 0.22
GDPD3-204ENST00000566434 C21orf2O43822 256 aa16.41■□□□□ 0.22
GDPD3-204ENST00000566434 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
GDPD3-204ENST00000566434 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
GDPD3-204ENST00000566434 CDHR2Q9BYE9 1310 aa16.41■□□□□ 0.22
GDPD3-204ENST00000566434 FRAT1Q92837 279 aaPredicted RBP16.4■□□□□ 0.22
GDPD3-204ENST00000566434 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
GDPD3-204ENST00000566434 API5Q9BZZ5 524 aaKnown RBP16.4■□□□□ 0.22
GDPD3-204ENST00000566434 PDE8AO60658 829 aa16.39■□□□□ 0.21
GDPD3-204ENST00000566434 BCAR3O75815 825 aa16.39■□□□□ 0.21
GDPD3-204ENST00000566434 ALDH1L1O75891 902 aa16.39■□□□□ 0.21
GDPD3-204ENST00000566434 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
GDPD3-204ENST00000566434 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
GDPD3-204ENST00000566434 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
GDPD3-204ENST00000566434 TMX4Q9H1E5 349 aaPredicted RBP16.39■□□□□ 0.21
GDPD3-204ENST00000566434 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
GDPD3-204ENST00000566434 ABCC4O15439 1325 aa16.39■□□□□ 0.21
GDPD3-204ENST00000566434 H7C1W4 665 aa16.38■□□□□ 0.21
GDPD3-204ENST00000566434 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
GDPD3-204ENST00000566434 IPO8O15397 1037 aaKnown RBP16.38■□□□□ 0.21
GDPD3-204ENST00000566434 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
GDPD3-204ENST00000566434 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
GDPD3-204ENST00000566434 MYH3P11055 1940 aa16.38■□□□□ 0.21
GDPD3-204ENST00000566434 GRM8O00222 908 aa16.37■□□□□ 0.21
GDPD3-204ENST00000566434 YY1P25490 414 aa16.37■□□□□ 0.21
GDPD3-204ENST00000566434 CTSWP56202 376 aa16.37■□□□□ 0.21
GDPD3-204ENST00000566434 SF3B3Q15393 1217 aaKnown RBP16.37■□□□□ 0.21
GDPD3-204ENST00000566434 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms