RNA–Protein interactions for RNA: ENST00000566234.2

CDIP1-208, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-208ENST00000566234 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
CDIP1-208ENST00000566234 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
CDIP1-208ENST00000566234 RTKN2Q8IZC4 609 aa17.18■□□□□ 0.34
CDIP1-208ENST00000566234 RPGRQ92834 1020 aaKnown RBP17.18■□□□□ 0.34
CDIP1-208ENST00000566234 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDIP1-208ENST00000566234 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
CDIP1-208ENST00000566234 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
CDIP1-208ENST00000566234 RBM17Q96I25 401 aaKnown RBP17.17■□□□□ 0.34
CDIP1-208ENST00000566234 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
CDIP1-208ENST00000566234 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
CDIP1-208ENST00000566234 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
CDIP1-208ENST00000566234 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
CDIP1-208ENST00000566234 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
CDIP1-208ENST00000566234 PLBD2Q8NHP8 589 aa17.16■□□□□ 0.34
CDIP1-208ENST00000566234 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
CDIP1-208ENST00000566234 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
CDIP1-208ENST00000566234 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
CDIP1-208ENST00000566234 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
CDIP1-208ENST00000566234 FSTL1Q12841 308 aa17.15■□□□□ 0.34
CDIP1-208ENST00000566234 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
CDIP1-208ENST00000566234 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
CDIP1-208ENST00000566234 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
CDIP1-208ENST00000566234 CC2D2BQ6DHV5 1058 aa17.14■□□□□ 0.33
CDIP1-208ENST00000566234 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
CDIP1-208ENST00000566234 ZNF277Q9NRM2 450 aaPredicted RBP17.14■□□□□ 0.33
CDIP1-208ENST00000566234 POTECB2RU33 542 aa17.13■□□□□ 0.33
CDIP1-208ENST00000566234 SYNE4Q8N205 404 aa17.13■□□□□ 0.33
CDIP1-208ENST00000566234 PSMD1Q99460 953 aa17.13■□□□□ 0.33
CDIP1-208ENST00000566234 SBF1O95248 1867 aa17.13■□□□□ 0.33
CDIP1-208ENST00000566234 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
CDIP1-208ENST00000566234 APLP1P51693 650 aa17.12■□□□□ 0.33
CDIP1-208ENST00000566234 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
CDIP1-208ENST00000566234 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
CDIP1-208ENST00000566234 CHMP4AQ9BY43 222 aa17.12■□□□□ 0.33
CDIP1-208ENST00000566234 NUP98P52948 1817 aa17.12■□□□□ 0.33
CDIP1-208ENST00000566234 TNRC6CQ9HCJ0 1690 aaKnown RBP17.11■□□□□ 0.33
CDIP1-208ENST00000566234 PPEF1O14829 653 aaPredicted RBP17.11■□□□□ 0.33
CDIP1-208ENST00000566234 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
CDIP1-208ENST00000566234 IARSP41252 1262 aaKnown RBP17.11■□□□□ 0.33
CDIP1-208ENST00000566234 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CDIP1-208ENST00000566234 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
CDIP1-208ENST00000566234 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
CDIP1-208ENST00000566234 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
CDIP1-208ENST00000566234 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
CDIP1-208ENST00000566234 TCERG1O14776 1098 aaKnown RBP17.1■□□□□ 0.33
CDIP1-208ENST00000566234 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
CDIP1-208ENST00000566234 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
CDIP1-208ENST00000566234 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
CDIP1-208ENST00000566234 GOLGA2Q08379 1002 aa17.09■□□□□ 0.33
CDIP1-208ENST00000566234 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
CDIP1-208ENST00000566234 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
CDIP1-208ENST00000566234 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
CDIP1-208ENST00000566234 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
CDIP1-208ENST00000566234 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
CDIP1-208ENST00000566234 TMX4Q9H1E5 349 aaPredicted RBP17.09■□□□□ 0.33
CDIP1-208ENST00000566234 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
CDIP1-208ENST00000566234 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.33
CDIP1-208ENST00000566234 ABCC4O15439 1325 aa17.08■□□□□ 0.32
CDIP1-208ENST00000566234 IL16Q14005 1332 aa17.08■□□□□ 0.32
CDIP1-208ENST00000566234 BBOX1O75936 387 aa17.08■□□□□ 0.32
CDIP1-208ENST00000566234 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
CDIP1-208ENST00000566234 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
CDIP1-208ENST00000566234 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
CDIP1-208ENST00000566234 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.32
CDIP1-208ENST00000566234 FZD9O00144 591 aa17.07■□□□□ 0.32
CDIP1-208ENST00000566234 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
CDIP1-208ENST00000566234 TIAM2Q8IVF5 1701 aa17.07■□□□□ 0.32
CDIP1-208ENST00000566234 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
CDIP1-208ENST00000566234 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
CDIP1-208ENST00000566234 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
CDIP1-208ENST00000566234 DDX58O95786 925 aaKnown RBP17.05■□□□□ 0.32
CDIP1-208ENST00000566234 GRAPQ13588 217 aa17.05■□□□□ 0.32
CDIP1-208ENST00000566234 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
CDIP1-208ENST00000566234 DNAJC5GQ8N7S2 189 aa17.05■□□□□ 0.32
CDIP1-208ENST00000566234 GRAPLQ8TC17 118 aaPredicted RBP17.05■□□□□ 0.32
CDIP1-208ENST00000566234 SALL2Q9Y467 1007 aaPredicted RBP17.05■□□□□ 0.32
CDIP1-208ENST00000566234 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
CDIP1-208ENST00000566234 SF3B3Q15393 1217 aaKnown RBP17.04■□□□□ 0.32
CDIP1-208ENST00000566234 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
CDIP1-208ENST00000566234 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
CDIP1-208ENST00000566234 WDR63Q8IWG1 891 aa17.04■□□□□ 0.32
CDIP1-208ENST00000566234 LARGE2Q8N3Y3 721 aa17.04■□□□□ 0.32
CDIP1-208ENST00000566234 MYD88Q99836 296 aa17.04■□□□□ 0.32
CDIP1-208ENST00000566234 WDR90Q96KV7 1748 aa17.04■□□□□ 0.32
CDIP1-208ENST00000566234 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
CDIP1-208ENST00000566234 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
CDIP1-208ENST00000566234 GPC2Q8N158 579 aa17.03■□□□□ 0.32
CDIP1-208ENST00000566234 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
CDIP1-208ENST00000566234 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
CDIP1-208ENST00000566234 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
CDIP1-208ENST00000566234 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
CDIP1-208ENST00000566234 VPS33BQ9H267 617 aa17.03■□□□□ 0.32
CDIP1-208ENST00000566234 CACNA1SQ13698 1873 aa17.02■□□□□ 0.32
CDIP1-208ENST00000566234 HTRA3P83110 453 aa17.02■□□□□ 0.32
CDIP1-208ENST00000566234 DPP8Q6V1X1 898 aaPredicted RBP17.02■□□□□ 0.32
CDIP1-208ENST00000566234 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
CDIP1-208ENST00000566234 MPNDQ8N594 471 aa17.02■□□□□ 0.32
CDIP1-208ENST00000566234 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
CDIP1-208ENST00000566234 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
CDIP1-208ENST00000566234 TAF1DQ9H5J8 278 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms