RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 RFX1P22670 979 aa12.2□□□□□ -0.46
SNX29-205ENST00000566228 SPTY2D1Q68D10 685 aaPredicted RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 EIF2AQ9BY44 585 aaKnown RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 PDRG1Q9NUG6 133 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 CUX1P39880 1505 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 HLA-DOAP06340 250 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 CCDC40Q4G0X9 1142 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 PUF60Q9UHX1 559 aaKnown RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 ZPR1O75312 459 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 STK10O94804 968 aaKnown RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 BAG3O95817 575 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 NAPBQ9H115 298 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 ATP11AP98196 1134 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 BICD1Q96G01 975 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 APAF1O14727 1248 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 ARFGAP3Q9NP61 516 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 URI1O94763 535 aaPredicted RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
SNX29-205ENST00000566228 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
SNX29-205ENST00000566228 RFC1P35251 1148 aaPredicted RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 ZSCAN30Q86W11 494 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 JADE2Q9NQC1 790 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 MINK1Q8N4C8 1332 aaPredicted RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 LDHCP07864 332 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 RNF168Q8IYW5 571 aaPredicted RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 SPAG1Q07617 926 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 MCM6Q14566 821 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 GPATCH11Q8N954 259 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 CALCOCO2Q13137 446 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 HDGFL1Q5TGJ6 251 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 C8orf76Q96K31 380 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 CAPZA3Q96KX2 299 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
SNX29-205ENST00000566228 IPO4Q8TEX9 1081 aaKnown RBP12.18□□□□□ -0.46
SNX29-205ENST00000566228 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 ERCC5P28715 1186 aaPredicted RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 PDE4BQ07343 736 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 CABP5Q9NP86 173 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 MTUS1Q9ULD2 1270 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 PHACTR2O75167 634 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 CA8P35219 290 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 FAM8A1Q9UBU6 413 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 TCERG1LQ5VWI1 586 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
SNX29-205ENST00000566228 LMNTD2Q8IXW0 634 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 GEN1Q17RS7 908 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX29-205ENST00000566228 SSFA2P28290 1259 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 INF2Q27J81 1249 aa12.17□□□□□ -0.46
SNX29-205ENST00000566228 UBA7P41226 1012 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 SAMD15Q9P1V8 674 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 STX1AQ16623 288 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 GSTA5Q7RTV2 222 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
SNX29-205ENST00000566228 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 GBP1P32455 592 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
SNX29-205ENST00000566228 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 DDX19AQ9NUU7 478 aaKnown RBP12.16□□□□□ -0.46
SNX29-205ENST00000566228 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
SNX29-205ENST00000566228 C16orf45Q96MC5 204 aaPredicted RBP12.16□□□□□ -0.46
SNX29-205ENST00000566228 B4GALNT4Q76KP1 1039 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.16□□□□□ -0.46
SNX29-205ENST00000566228 SAMM50Q9Y512 469 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
SNX29-205ENST00000566228 NLRP6P59044 892 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
SNX29-205ENST00000566228 NLRP5P59047 1200 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 FYB2Q5VWT5 728 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
SNX29-205ENST00000566228 PTPRGP23470 1445 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 ESPNB1AK53 854 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 EBAG9O00559 213 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 KIF11P52732 1056 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 CTAGE6Q86UF2 777 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
SNX29-205ENST00000566228 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms