RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 ZNF853P0CG23 659 aa25.89■■□□□ 1.74
TRADD-204ENST00000566104 AIMP1Q12904 312 aaKnown RBP25.89■■□□□ 1.74
TRADD-204ENST00000566104 RPGRQ92834 1020 aaKnown RBP25.89■■□□□ 1.74
TRADD-204ENST00000566104 DBF4Q9UBU7 674 aaPredicted RBP25.89■■□□□ 1.74
TRADD-204ENST00000566104 WDR90Q96KV7 1748 aa25.88■■□□□ 1.73
TRADD-204ENST00000566104 DPY19L2Q6NUT2 758 aa25.88■■□□□ 1.73
TRADD-204ENST00000566104 RBM46Q8TBY0 533 aaKnown RBP25.88■■□□□ 1.73
TRADD-204ENST00000566104 C7orf43Q8WVR3 580 aa25.88■■□□□ 1.73
TRADD-204ENST00000566104 LAMB2P55268 1798 aa25.87■■□□□ 1.73
TRADD-204ENST00000566104 DUSP27Q5VZP5 1158 aa25.87■■□□□ 1.73
TRADD-204ENST00000566104 RTKN2Q8IZC4 609 aa25.87■■□□□ 1.73
TRADD-204ENST00000566104 UTP14AQ9BVJ6 771 aaKnown RBP25.87■■□□□ 1.73
TRADD-204ENST00000566104 RRAGCQ9HB90 399 aa25.86■■□□□ 1.73
TRADD-204ENST00000566104 FKBP4Q02790 459 aaKnown RBP eCLIP25.85■■□□□ 1.73
TRADD-204ENST00000566104 HYPKQ9NX55 129 aa25.85■■□□□ 1.73
TRADD-204ENST00000566104 HOXA10P31260 410 aaPredicted RBP25.84■■□□□ 1.73
TRADD-204ENST00000566104 CCDC184Q52MB2 194 aa25.84■■□□□ 1.73
TRADD-204ENST00000566104 NLRP3Q96P20 1036 aa25.84■■□□□ 1.73
TRADD-204ENST00000566104 CHMP4AQ9BY43 222 aa25.84■■□□□ 1.73
TRADD-204ENST00000566104 MRS2Q9HD23 443 aa25.84■■□□□ 1.73
TRADD-204ENST00000566104 VEGFAP15692 232 aaPredicted RBP25.83■■□□□ 1.73
TRADD-204ENST00000566104 TCIRG1Q13488 830 aa25.83■■□□□ 1.73
TRADD-204ENST00000566104 CC2D2BQ6DHV5 1058 aa25.83■■□□□ 1.73
TRADD-204ENST00000566104 PLBD2Q8NHP8 589 aa25.83■■□□□ 1.73
TRADD-204ENST00000566104 RBM17Q96I25 401 aaKnown RBP25.83■■□□□ 1.73
TRADD-204ENST00000566104 FSTL1Q12841 308 aa25.82■■□□□ 1.72
TRADD-204ENST00000566104 CCDC27Q2M243 656 aa25.81■■□□□ 1.72
TRADD-204ENST00000566104 GRIPAP1Q4V328 841 aa25.81■■□□□ 1.72
TRADD-204ENST00000566104 ANKRD13DQ6ZTN6 518 aa25.81■■□□□ 1.72
TRADD-204ENST00000566104 NLRP10Q86W26 655 aa25.81■■□□□ 1.72
TRADD-204ENST00000566104 CRAMP1Q96RY5 1269 aa25.81■■□□□ 1.72
TRADD-204ENST00000566104 SLC10A5Q5PT55 438 aa25.8■■□□□ 1.72
TRADD-204ENST00000566104 APLP1P51693 650 aa25.79■■□□□ 1.72
TRADD-204ENST00000566104 TRMT112Q9UI30 125 aaKnown RBP25.79■■□□□ 1.72
TRADD-204ENST00000566104 SH3TC1Q8TE82 1336 aa25.79■■□□□ 1.72
TRADD-204ENST00000566104 DDX60Q8IY21 1712 aaKnown RBP25.79■■□□□ 1.72
TRADD-204ENST00000566104 SNED1Q8TER0 1413 aa25.79■■□□□ 1.72
TRADD-204ENST00000566104 NCBP3Q53F19 620 aaKnown RBP25.78■■□□□ 1.72
TRADD-204ENST00000566104 PSMD1Q99460 953 aa25.78■■□□□ 1.72
TRADD-204ENST00000566104 SCN4AP35499 1836 aa25.78■■□□□ 1.72
TRADD-204ENST00000566104 CEP350Q5VT06 3117 aa25.78■■□□□ 1.72
TRADD-204ENST00000566104 PPEF1O14829 653 aaPredicted RBP25.77■■□□□ 1.72
TRADD-204ENST00000566104 OLFM4Q6UX06 510 aa25.77■■□□□ 1.72
TRADD-204ENST00000566104 SMC1BQ8NDV3 1235 aa25.77■■□□□ 1.72
TRADD-204ENST00000566104 TMX4Q9H1E5 349 aaPredicted RBP25.77■■□□□ 1.72
TRADD-204ENST00000566104 ZNF277Q9NRM2 450 aaPredicted RBP25.77■■□□□ 1.72
TRADD-204ENST00000566104 GOLGA2Q08379 1002 aa25.76■■□□□ 1.71
TRADD-204ENST00000566104 ELL2O00472 640 aaPredicted RBP25.75■■□□□ 1.71
TRADD-204ENST00000566104 IARSP41252 1262 aaKnown RBP25.75■■□□□ 1.71
TRADD-204ENST00000566104 CCDC30Q5VVM6 783 aa25.75■■□□□ 1.71
TRADD-204ENST00000566104 C3orf67Q6ZVT6 689 aa25.75■■□□□ 1.71
TRADD-204ENST00000566104 WWC1Q8IX03 1113 aa25.75■■□□□ 1.71
TRADD-204ENST00000566104 SYNE4Q8N205 404 aa25.74■■□□□ 1.71
TRADD-204ENST00000566104 IL16Q14005 1332 aa25.73■■□□□ 1.71
TRADD-204ENST00000566104 C8orf58Q8NAV2 365 aa25.73■■□□□ 1.71
TRADD-204ENST00000566104 ISCA1Q9BUE6 129 aa25.73■■□□□ 1.71
TRADD-204ENST00000566104 CACNA1FO60840 1977 aa25.73■■□□□ 1.71
TRADD-204ENST00000566104 ABCC4O15439 1325 aa25.72■■□□□ 1.71
TRADD-204ENST00000566104 RIC3Q7Z5B4 369 aa25.72■■□□□ 1.71
TRADD-204ENST00000566104 IQCA1LA6NCM1 817 aa25.71■■□□□ 1.71
TRADD-204ENST00000566104 DDNO94850 711 aaPredicted RBP25.71■■□□□ 1.71
TRADD-204ENST00000566104 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
TRADD-204ENST00000566104 JDP2Q8WYK2 163 aa25.71■■□□□ 1.71
TRADD-204ENST00000566104 POTECB2RU33 542 aa25.7■■□□□ 1.7
TRADD-204ENST00000566104 DDX58O95786 925 aaKnown RBP25.7■■□□□ 1.7
TRADD-204ENST00000566104 TRIM28Q13263 835 aaKnown RBP25.7■■□□□ 1.7
TRADD-204ENST00000566104 DDX46Q7L014 1031 aaKnown RBP25.7■■□□□ 1.7
TRADD-204ENST00000566104 TSR2Q969E8 191 aaKnown RBP25.7■■□□□ 1.7
TRADD-204ENST00000566104 TAF1P21675 1872 aa25.7■■□□□ 1.7
TRADD-204ENST00000566104 LRRC37AA6NMS7 1700 aa25.69■■□□□ 1.7
TRADD-204ENST00000566104 ATP5J2-PTCD1G3V325 749 aa25.69■■□□□ 1.7
TRADD-204ENST00000566104 BBOX1O75936 387 aa25.69■■□□□ 1.7
TRADD-204ENST00000566104 L3MBTL3Q96JM7 780 aaPredicted RBP25.69■■□□□ 1.7
TRADD-204ENST00000566104 PHAXQ9H814 394 aaKnown RBP25.69■■□□□ 1.7
TRADD-204ENST00000566104 ATP6V0A2Q9Y487 856 aa25.69■■□□□ 1.7
TRADD-204ENST00000566104 TCERG1O14776 1098 aaKnown RBP25.68■■□□□ 1.7
TRADD-204ENST00000566104 STK31Q9BXU1 1019 aa25.68■■□□□ 1.7
TRADD-204ENST00000566104 ZNF541Q9H0D2 1346 aa25.67■■□□□ 1.7
TRADD-204ENST00000566104 FZD9O00144 591 aa25.67■■□□□ 1.7
TRADD-204ENST00000566104 HSP90B1P14625 803 aaKnown RBP25.67■■□□□ 1.7
TRADD-204ENST00000566104 GRAPQ13588 217 aa25.67■■□□□ 1.7
TRADD-204ENST00000566104 TMC4Q7Z404 712 aa25.67■■□□□ 1.7
TRADD-204ENST00000566104 GRAPLQ8TC17 118 aaPredicted RBP25.67■■□□□ 1.7
TRADD-204ENST00000566104 TSPYL6Q8N831 410 aa25.66■■□□□ 1.7
TRADD-204ENST00000566104 SUPT20HQ8NEM7 779 aa25.66■■□□□ 1.7
TRADD-204ENST00000566104 FAM89AQ96GI7 184 aa25.66■■□□□ 1.7
TRADD-204ENST00000566104 TWISTNBQ3B726 338 aaPredicted RBP25.65■■□□□ 1.7
TRADD-204ENST00000566104 LARGE2Q8N3Y3 721 aa25.65■■□□□ 1.7
TRADD-204ENST00000566104 VPS33BQ9H267 617 aa25.65■■□□□ 1.7
TRADD-204ENST00000566104 EIF6P56537 245 aaKnown RBP25.64■■□□□ 1.7
TRADD-204ENST00000566104 SP8Q8IXZ3 490 aa25.64■■□□□ 1.7
TRADD-204ENST00000566104 GPC2Q8N158 579 aa25.64■■□□□ 1.7
TRADD-204ENST00000566104 CCDC191Q8NCU4 936 aa25.64■■□□□ 1.7
TRADD-204ENST00000566104 COL4A5P29400 1685 aa25.64■■□□□ 1.69
TRADD-204ENST00000566104 WDR63Q8IWG1 891 aa25.63■■□□□ 1.69
TRADD-204ENST00000566104 ZBTB38Q8NAP3 1195 aaPredicted RBP25.63■■□□□ 1.69
TRADD-204ENST00000566104 MYD88Q99836 296 aa25.63■■□□□ 1.69
TRADD-204ENST00000566104 MYH3P11055 1940 aa25.63■■□□□ 1.69
TRADD-204ENST00000566104 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
TRADD-204ENST00000566104 PPIP5K2O43314 1243 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms