RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 ATP5J2-PTCD1G3V325 749 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 KSR2Q6VAB6 950 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 G2E3Q7L622 706 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 MYD88Q99836 296 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 ARFGEF1Q9Y6D6 1849 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 ADCY9O60503 1353 aa16.46■□□□□ 0.23
PDXDC1-212ENST00000565986 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
PDXDC1-212ENST00000565986 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
PDXDC1-212ENST00000565986 METTL22Q9BUU2 404 aaPredicted RBP16.45■□□□□ 0.22
PDXDC1-212ENST00000565986 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
PDXDC1-212ENST00000565986 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
PDXDC1-212ENST00000565986 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
PDXDC1-212ENST00000565986 SRGNP10124 158 aa16.44■□□□□ 0.22
PDXDC1-212ENST00000565986 NEXNQ0ZGT2 675 aa16.44■□□□□ 0.22
PDXDC1-212ENST00000565986 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
PDXDC1-212ENST00000565986 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
PDXDC1-212ENST00000565986 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDXDC1-212ENST00000565986 CHD4Q14839 1912 aa16.43■□□□□ 0.22
PDXDC1-212ENST00000565986 STYK1Q6J9G0 422 aa16.43■□□□□ 0.22
PDXDC1-212ENST00000565986 MASTLQ96GX5 879 aa16.43■□□□□ 0.22
PDXDC1-212ENST00000565986 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 UTRNP46939 3433 aa16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 KLRG2A4D1S0 409 aaPredicted RBP16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 NPR1P16066 1061 aa16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 DNAAF4Q8WXU2 420 aa16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 CNKSR1Q969H4 720 aa16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
PDXDC1-212ENST00000565986 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
PDXDC1-212ENST00000565986 CRY2Q49AN0 593 aa16.41■□□□□ 0.22
PDXDC1-212ENST00000565986 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
PDXDC1-212ENST00000565986 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
PDXDC1-212ENST00000565986 LAMB2P55268 1798 aa16.41■□□□□ 0.22
PDXDC1-212ENST00000565986 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
PDXDC1-212ENST00000565986 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
PDXDC1-212ENST00000565986 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
PDXDC1-212ENST00000565986 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
PDXDC1-212ENST00000565986 BCL2L13Q9BXK5 485 aa16.4■□□□□ 0.22
PDXDC1-212ENST00000565986 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 IGKV5-2P06315 115 aa16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 SLC10A5Q5PT55 438 aa16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 MRPL50Q8N5N7 158 aaKnown RBP16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
PDXDC1-212ENST00000565986 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 NEURL1BA8MQ27 555 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 F6X3S4 739 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 HSP90B1P14625 803 aaKnown RBP16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 CWF19L2Q2TBE0 894 aaKnown RBP16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 PTPRCP08575 1304 aa16.38■□□□□ 0.21
PDXDC1-212ENST00000565986 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
PDXDC1-212ENST00000565986 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
PDXDC1-212ENST00000565986 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
PDXDC1-212ENST00000565986 YY1P25490 414 aa16.36■□□□□ 0.21
PDXDC1-212ENST00000565986 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
PDXDC1-212ENST00000565986 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
PDXDC1-212ENST00000565986 C21orf2O43822 256 aa16.35■□□□□ 0.21
PDXDC1-212ENST00000565986 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
PDXDC1-212ENST00000565986 GCKRQ14397 625 aa16.35■□□□□ 0.21
PDXDC1-212ENST00000565986 SOGA3Q5TF21 947 aa16.35■□□□□ 0.21
PDXDC1-212ENST00000565986 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
PDXDC1-212ENST00000565986 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
PDXDC1-212ENST00000565986 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
PDXDC1-212ENST00000565986 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
PDXDC1-212ENST00000565986 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
PDXDC1-212ENST00000565986 CDHR2Q9BYE9 1310 aa16.34■□□□□ 0.21
PDXDC1-212ENST00000565986 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
PDXDC1-212ENST00000565986 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.2
PDXDC1-212ENST00000565986 ABCC4O15439 1325 aa16.33■□□□□ 0.2
PDXDC1-212ENST00000565986 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
PDXDC1-212ENST00000565986 PDE8AO60658 829 aa16.32■□□□□ 0.2
PDXDC1-212ENST00000565986 MYH3P11055 1940 aa16.32■□□□□ 0.2
PDXDC1-212ENST00000565986 SF3B3Q15393 1217 aaKnown RBP16.32■□□□□ 0.2
PDXDC1-212ENST00000565986 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
PDXDC1-212ENST00000565986 SRCIN1Q9C0H9 1055 aa16.32■□□□□ 0.2
PDXDC1-212ENST00000565986 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
PDXDC1-212ENST00000565986 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
PDXDC1-212ENST00000565986 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
PDXDC1-212ENST00000565986 RASSF7Q02833 373 aa16.31■□□□□ 0.2
PDXDC1-212ENST00000565986 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
PDXDC1-212ENST00000565986 H7C1W4 665 aa16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 NFKBIEO00221 500 aa16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 CTSWP56202 376 aa16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 GRAPQ13588 217 aa16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
PDXDC1-212ENST00000565986 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms