RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 CCDC30Q5VVM6 783 aa31.04■■■□□ 2.56
TCF4-230ENST00000565908 C1QTNF8P60827 252 aa31.03■■■□□ 2.56
TCF4-230ENST00000565908 ZC3H4Q9UPT8 1303 aaKnown RBP31.02■■■□□ 2.56
TCF4-230ENST00000565908 TSPYL6Q8N831 410 aa31.02■■■□□ 2.56
TCF4-230ENST00000565908 RPGRQ92834 1020 aaKnown RBP31.02■■■□□ 2.56
TCF4-230ENST00000565908 TNRC6CQ9HCJ0 1690 aaKnown RBP31.01■■■□□ 2.55
TCF4-230ENST00000565908 GOLGA2Q08379 1002 aa31.01■■■□□ 2.55
TCF4-230ENST00000565908 SLC10A5Q5PT55 438 aa31.01■■■□□ 2.55
TCF4-230ENST00000565908 C7orf43Q8WVR3 580 aa31.01■■■□□ 2.55
TCF4-230ENST00000565908 SLX4Q8IY92 1834 aa31.01■■■□□ 2.55
TCF4-230ENST00000565908 LTBP3Q9NS15 1303 aa31■■■□□ 2.55
TCF4-230ENST00000565908 NLRP3Q96P20 1036 aa31■■■□□ 2.55
TCF4-230ENST00000565908 TAOK3Q9H2K8 898 aa31■■■□□ 2.55
TCF4-230ENST00000565908 ARFGEF2Q9Y6D5 1785 aa31■■■□□ 2.55
TCF4-230ENST00000565908 HOXA10P31260 410 aaPredicted RBP30.99■■■□□ 2.55
TCF4-230ENST00000565908 PRELPP51888 382 aa30.99■■■□□ 2.55
TCF4-230ENST00000565908 CCDC93Q567U6 631 aa30.99■■■□□ 2.55
TCF4-230ENST00000565908 PHAXQ9H814 394 aaKnown RBP30.99■■■□□ 2.55
TCF4-230ENST00000565908 TRMT112Q9UI30 125 aaKnown RBP30.99■■■□□ 2.55
TCF4-230ENST00000565908 TWISTNBQ3B726 338 aaPredicted RBP30.98■■■□□ 2.55
TCF4-230ENST00000565908 RIC3Q7Z5B4 369 aa30.98■■■□□ 2.55
TCF4-230ENST00000565908 ISCA1Q9BUE6 129 aa30.98■■■□□ 2.55
TCF4-230ENST00000565908 SBF1O95248 1867 aa30.97■■■□□ 2.55
TCF4-230ENST00000565908 ANKRD36CQ5JPF3 1778 aa30.97■■■□□ 2.55
TCF4-230ENST00000565908 RBM17Q96I25 401 aaKnown RBP30.97■■■□□ 2.55
TCF4-230ENST00000565908 SH3TC1Q8TE82 1336 aa30.97■■■□□ 2.55
TCF4-230ENST00000565908 FANCIQ9NVI1 1328 aa30.97■■■□□ 2.55
TCF4-230ENST00000565908 STK31Q9BXU1 1019 aa30.96■■■□□ 2.55
TCF4-230ENST00000565908 KDM2BQ8NHM5 1336 aa30.96■■■□□ 2.55
TCF4-230ENST00000565908 C3orf67Q6ZVT6 689 aa30.95■■■□□ 2.55
TCF4-230ENST00000565908 CRAMP1Q96RY5 1269 aa30.95■■■□□ 2.55
TCF4-230ENST00000565908 ATP5J2-PTCD1G3V325 749 aa30.94■■■□□ 2.54
TCF4-230ENST00000565908 KIF3CO14782 793 aa30.94■■■□□ 2.54
TCF4-230ENST00000565908 DDX58O95786 925 aaKnown RBP30.94■■■□□ 2.54
TCF4-230ENST00000565908 TRIM28Q13263 835 aaKnown RBP30.94■■■□□ 2.54
TCF4-230ENST00000565908 RTKN2Q8IZC4 609 aa30.94■■■□□ 2.54
TCF4-230ENST00000565908 CACNA1SQ13698 1873 aa30.93■■■□□ 2.54
TCF4-230ENST00000565908 FER1L6Q2WGJ9 1857 aa30.93■■■□□ 2.54
TCF4-230ENST00000565908 HCLS1P14317 486 aaPredicted RBP30.91■■■□□ 2.54
TCF4-230ENST00000565908 FKBP4Q02790 459 aaKnown RBP eCLIP30.91■■■□□ 2.54
TCF4-230ENST00000565908 CC2D2BQ6DHV5 1058 aa30.91■■■□□ 2.54
TCF4-230ENST00000565908 SYNE4Q8N205 404 aa30.91■■■□□ 2.54
TCF4-230ENST00000565908 NMRK2Q9NPI5 230 aa30.91■■■□□ 2.54
TCF4-230ENST00000565908 MYH16Q9H6N6 1097 aa30.9■■■□□ 2.54
TCF4-230ENST00000565908 OLFM4Q6UX06 510 aa30.89■■■□□ 2.54
TCF4-230ENST00000565908 GLTPD2A6NH11 291 aa30.88■■■□□ 2.53
TCF4-230ENST00000565908 MYD88Q99836 296 aa30.88■■■□□ 2.53
TCF4-230ENST00000565908 TCERG1O14776 1098 aaKnown RBP30.87■■■□□ 2.53
TCF4-230ENST00000565908 PPEF1O14829 653 aaPredicted RBP30.87■■■□□ 2.53
TCF4-230ENST00000565908 GRIPAP1Q4V328 841 aa30.87■■■□□ 2.53
TCF4-230ENST00000565908 ZNF428Q96B54 188 aa30.87■■■□□ 2.53
TCF4-230ENST00000565908 FAM89AQ96GI7 184 aa30.87■■■□□ 2.53
TCF4-230ENST00000565908 SPINK5Q9NQ38 1064 aaPredicted RBP30.87■■■□□ 2.53
TCF4-230ENST00000565908 CCER2I3L3R5 266 aa30.86■■■□□ 2.53
TCF4-230ENST00000565908 SLC4A2P04920 1241 aa30.86■■■□□ 2.53
TCF4-230ENST00000565908 EXOSC9Q06265 439 aaKnown RBP30.86■■■□□ 2.53
TCF4-230ENST00000565908 METTL22Q9BUU2 404 aaPredicted RBP30.86■■■□□ 2.53
TCF4-230ENST00000565908 VAMP4O75379 141 aa30.85■■■□□ 2.53
TCF4-230ENST00000565908 DPY19L2Q6NUT2 758 aa30.85■■■□□ 2.53
TCF4-230ENST00000565908 KSR2Q6VAB6 950 aa30.85■■■□□ 2.53
TCF4-230ENST00000565908 CCDC191Q8NCU4 936 aa30.85■■■□□ 2.53
TCF4-230ENST00000565908 ABCC4O15439 1325 aa30.84■■■□□ 2.53
TCF4-230ENST00000565908 DDX46Q7L014 1031 aaKnown RBP30.84■■■□□ 2.53
TCF4-230ENST00000565908 PSMD1Q99460 953 aa30.84■■■□□ 2.53
TCF4-230ENST00000565908 TMX4Q9H1E5 349 aaPredicted RBP30.84■■■□□ 2.53
TCF4-230ENST00000565908 MAP3K2Q9Y2U5 619 aa30.84■■■□□ 2.53
TCF4-230ENST00000565908 TIAM2Q8IVF5 1701 aa30.84■■■□□ 2.53
TCF4-230ENST00000565908 ZBTB38Q8NAP3 1195 aaPredicted RBP30.83■■■□□ 2.53
TCF4-230ENST00000565908 RRAGCQ9HB90 399 aa30.83■■■□□ 2.53
TCF4-230ENST00000565908 ZNF277Q9NRM2 450 aaPredicted RBP30.83■■■□□ 2.53
TCF4-230ENST00000565908 SNED1Q8TER0 1413 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 ZNF521Q96K83 1311 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 PI4KAP2A4QPH2 592 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 BBOX1O75936 387 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 TOMM70O94826 608 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 HSP90B1P14625 803 aaKnown RBP30.82■■■□□ 2.52
TCF4-230ENST00000565908 PI4KAP1Q8N8J0 262 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 CWC25Q9NXE8 425 aaPredicted RBP30.82■■■□□ 2.52
TCF4-230ENST00000565908 CCDC88AQ3V6T2 1871 aa30.82■■■□□ 2.52
TCF4-230ENST00000565908 IRS4O14654 1257 aaPredicted RBP30.81■■■□□ 2.52
TCF4-230ENST00000565908 RTL5Q5HYW3 569 aaPredicted RBP30.81■■■□□ 2.52
TCF4-230ENST00000565908 C16orf71Q8IYS4 520 aaPredicted RBP30.81■■■□□ 2.52
TCF4-230ENST00000565908 ATP6V0A2Q9Y487 856 aa30.81■■■□□ 2.52
TCF4-230ENST00000565908 SF3B3Q15393 1217 aaKnown RBP30.8■■■□□ 2.52
TCF4-230ENST00000565908 G2E3Q7L622 706 aa30.8■■■□□ 2.52
TCF4-230ENST00000565908 IARSP41252 1262 aaKnown RBP30.79■■■□□ 2.52
TCF4-230ENST00000565908 NEXNQ0ZGT2 675 aa30.79■■■□□ 2.52
TCF4-230ENST00000565908 GRAPQ13588 217 aa30.79■■■□□ 2.52
TCF4-230ENST00000565908 GRAPLQ8TC17 118 aaPredicted RBP30.79■■■□□ 2.52
TCF4-230ENST00000565908 DICER1Q9UPY3 1922 aaKnown RBP30.79■■■□□ 2.52
TCF4-230ENST00000565908 PCCAP05165 728 aaPredicted RBP30.78■■■□□ 2.52
TCF4-230ENST00000565908 FLIIQ13045 1269 aa30.78■■■□□ 2.52
TCF4-230ENST00000565908 VEGFAP15692 232 aaPredicted RBP30.77■■■□□ 2.52
TCF4-230ENST00000565908 TMC4Q7Z404 712 aa30.76■■■□□ 2.51
TCF4-230ENST00000565908 SP8Q8IXZ3 490 aa30.76■■■□□ 2.51
TCF4-230ENST00000565908 LAMB2P55268 1798 aa30.76■■■□□ 2.51
TCF4-230ENST00000565908 RBM46Q8TBY0 533 aaKnown RBP30.75■■■□□ 2.51
TCF4-230ENST00000565908 DDX60Q8IY21 1712 aaKnown RBP30.75■■■□□ 2.51
TCF4-230ENST00000565908 IGKV5-2P06315 115 aa30.74■■■□□ 2.51
TCF4-230ENST00000565908 FKBP5Q13451 457 aaPredicted RBP30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms