RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 DPEP1P16444 411 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 SSH1Q8WYL5 1049 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 NLRP3Q96P20 1036 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 MYD88Q99836 296 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 STYK1Q6J9G0 422 aa16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 ZBTB38Q8NAP3 1195 aaPredicted RBP16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 LINS1Q8NG48 757 aa16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 CNKSR1Q969H4 720 aa16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 MASTLQ96GX5 879 aa16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 SMC4Q9NTJ3 1288 aa16.01■□□□□ 0.15
SHCBP1-204ENST00000565887 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
SHCBP1-204ENST00000565887 NPR1P16066 1061 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 KCNA3P22001 575 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 ALDH1B1P30837 517 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 RARSP54136 660 aaKnown RBP16■□□□□ 0.15
SHCBP1-204ENST00000565887 ERFEQ4G0M1 354 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 DALRD3Q5D0E6 543 aaKnown RBP16■□□□□ 0.15
SHCBP1-204ENST00000565887 TTLL6Q8N841 843 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 RIC1Q4ADV7 1423 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 ADCY9O60503 1353 aa16■□□□□ 0.15
SHCBP1-204ENST00000565887 PXDNLA1KZ92 1463 aa15.99■□□□□ 0.15
SHCBP1-204ENST00000565887 SRGNP10124 158 aa15.99■□□□□ 0.15
SHCBP1-204ENST00000565887 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
SHCBP1-204ENST00000565887 ARHGAP45Q92619 1136 aa15.99■□□□□ 0.15
SHCBP1-204ENST00000565887 PCCAP05165 728 aaPredicted RBP15.98■□□□□ 0.15
SHCBP1-204ENST00000565887 ZNF622Q969S3 477 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHCBP1-204ENST00000565887 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
SHCBP1-204ENST00000565887 KIF16BQ96L93 1317 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 NEURL1BA8MQ27 555 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 ALDH1L1O75891 902 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 IGKV5-2P06315 115 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 CHRNA5P30532 468 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 CRY2Q49AN0 593 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 RPGRQ92834 1020 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 API5Q9BZZ5 524 aaKnown RBP15.97■□□□□ 0.15
SHCBP1-204ENST00000565887 ARFGEF2Q9Y6D5 1785 aa15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 GCKRQ14397 625 aa15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 FAM89AQ96GI7 184 aa15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 RBM17Q96I25 401 aaKnown RBP15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 BCS1LQ9Y276 419 aa15.96■□□□□ 0.15
SHCBP1-204ENST00000565887 IRS4O14654 1257 aaPredicted RBP15.95■□□□□ 0.14
SHCBP1-204ENST00000565887 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
SHCBP1-204ENST00000565887 BEND3Q5T5X7 828 aa15.95■□□□□ 0.14
SHCBP1-204ENST00000565887 CRAMP1Q96RY5 1269 aa15.95■□□□□ 0.14
SHCBP1-204ENST00000565887 SRCIN1Q9C0H9 1055 aa15.95■□□□□ 0.14
SHCBP1-204ENST00000565887 CDHR2Q9BYE9 1310 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 F6X3S4 739 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 H7C1W4 665 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 PDE8AO60658 829 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 SF3B3Q15393 1217 aaKnown RBP15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 SLC4A10Q6U841 1118 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 TMX4Q9H1E5 349 aaPredicted RBP15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
SHCBP1-204ENST00000565887 BBOX1O75936 387 aa15.93■□□□□ 0.14
SHCBP1-204ENST00000565887 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
SHCBP1-204ENST00000565887 CCT4P50991 539 aaKnown RBP15.93■□□□□ 0.14
SHCBP1-204ENST00000565887 CWF19L2Q2TBE0 894 aaKnown RBP15.93■□□□□ 0.14
SHCBP1-204ENST00000565887 CC2D2BQ6DHV5 1058 aa15.93■□□□□ 0.14
SHCBP1-204ENST00000565887 DDX46Q7L014 1031 aaKnown RBP15.93■□□□□ 0.14
SHCBP1-204ENST00000565887 N4BP2Q86UW6 1770 aaPredicted RBP15.92■□□□□ 0.14
SHCBP1-204ENST00000565887 ABCC12Q96J65 1359 aa15.92■□□□□ 0.14
SHCBP1-204ENST00000565887 YBX3P16989 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
SHCBP1-204ENST00000565887 TMC4Q7Z404 712 aa15.92■□□□□ 0.14
SHCBP1-204ENST00000565887 C9orf78Q9NZ63 289 aaPredicted RBP15.92■□□□□ 0.14
SHCBP1-204ENST00000565887 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
SHCBP1-204ENST00000565887 CCDC152Q4G0S7 254 aa15.91■□□□□ 0.14
SHCBP1-204ENST00000565887 SYNE4Q8N205 404 aa15.91■□□□□ 0.14
SHCBP1-204ENST00000565887 KIAA1551Q9HCM1 1747 aa15.91■□□□□ 0.14
SHCBP1-204ENST00000565887 GRM8O00222 908 aa15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 MS4A1P11836 297 aa15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 PRPF40BQ6NWY9 871 aaKnown RBP15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 PLA2G12BQ9BX93 195 aa15.9■□□□□ 0.14
SHCBP1-204ENST00000565887 BCAR3O75815 825 aa15.89■□□□□ 0.13
SHCBP1-204ENST00000565887 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
SHCBP1-204ENST00000565887 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
SHCBP1-204ENST00000565887 RTKN2Q8IZC4 609 aa15.89■□□□□ 0.13
SHCBP1-204ENST00000565887 DLEC1Q9Y238 1755 aa15.89■□□□□ 0.13
SHCBP1-204ENST00000565887 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
SHCBP1-204ENST00000565887 FRAT1Q92837 279 aaPredicted RBP15.88■□□□□ 0.13
SHCBP1-204ENST00000565887 C21orf2O43822 256 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 CTSWP56202 376 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 GRAPQ13588 217 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 INTS3Q68E01 1043 aaKnown RBP15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 RCAN3Q9UKA8 241 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
SHCBP1-204ENST00000565887 UTYO14607 1347 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms