RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 NPR1P16066 1061 aa24.04■■□□□ 1.44
CMTM3-210ENST00000565666 KLRG2A4D1S0 409 aaPredicted RBP24.03■■□□□ 1.44
CMTM3-210ENST00000565666 ZNF219Q9P2Y4 722 aaPredicted RBP24.03■■□□□ 1.44
CMTM3-210ENST00000565666 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
CMTM3-210ENST00000565666 RIC1Q4ADV7 1423 aa24.02■■□□□ 1.44
CMTM3-210ENST00000565666 ATP5J2-PTCD1G3V325 749 aa24.02■■□□□ 1.44
CMTM3-210ENST00000565666 TRMT112Q9UI30 125 aaKnown RBP24.02■■□□□ 1.44
CMTM3-210ENST00000565666 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
CMTM3-210ENST00000565666 VAMP4O75379 141 aa24.01■■□□□ 1.43
CMTM3-210ENST00000565666 SLC4A2P04920 1241 aa24.01■■□□□ 1.43
CMTM3-210ENST00000565666 PRPF40BQ6NWY9 871 aaKnown RBP24.01■■□□□ 1.43
CMTM3-210ENST00000565666 ZNF784Q8NCA9 323 aaPredicted RBP24.01■■□□□ 1.43
CMTM3-210ENST00000565666 ZNF428Q96B54 188 aa24.01■■□□□ 1.43
CMTM3-210ENST00000565666 SLX4Q8IY92 1834 aa24■■□□□ 1.43
CMTM3-210ENST00000565666 C21orf2O43822 256 aa24■■□□□ 1.43
CMTM3-210ENST00000565666 RPGRQ92834 1020 aaKnown RBP24■■□□□ 1.43
CMTM3-210ENST00000565666 ISCA1Q9BUE6 129 aa24■■□□□ 1.43
CMTM3-210ENST00000565666 NLRP3Q96P20 1036 aa23.99■■□□□ 1.43
CMTM3-210ENST00000565666 MYD88Q99836 296 aa23.99■■□□□ 1.43
CMTM3-210ENST00000565666 E9PSI1 815 aa23.98■■□□□ 1.43
CMTM3-210ENST00000565666 ALDH1B1P30837 517 aa23.98■■□□□ 1.43
CMTM3-210ENST00000565666 SH3TC1Q8TE82 1336 aa23.98■■□□□ 1.43
CMTM3-210ENST00000565666 CACNA1FO60840 1977 aa23.98■■□□□ 1.43
CMTM3-210ENST00000565666 RASSF7Q02833 373 aa23.97■■□□□ 1.43
CMTM3-210ENST00000565666 CRY2Q49AN0 593 aa23.97■■□□□ 1.43
CMTM3-210ENST00000565666 MAP3K2Q9Y2U5 619 aa23.97■■□□□ 1.43
CMTM3-210ENST00000565666 UTRNP46939 3433 aa23.97■■□□□ 1.43
CMTM3-210ENST00000565666 ADCY9O60503 1353 aa23.96■■□□□ 1.43
CMTM3-210ENST00000565666 SLC10A5Q5PT55 438 aa23.96■■□□□ 1.43
CMTM3-210ENST00000565666 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
CMTM3-210ENST00000565666 KSR2Q6VAB6 950 aa23.96■■□□□ 1.43
CMTM3-210ENST00000565666 G2E3Q7L622 706 aa23.96■■□□□ 1.43
CMTM3-210ENST00000565666 METTL22Q9BUU2 404 aaPredicted RBP23.96■■□□□ 1.43
CMTM3-210ENST00000565666 LAMB2P55268 1798 aa23.96■■□□□ 1.43
CMTM3-210ENST00000565666 PI4KAP2A4QPH2 592 aa23.95■■□□□ 1.42
CMTM3-210ENST00000565666 HCLS1P14317 486 aaPredicted RBP23.95■■□□□ 1.42
CMTM3-210ENST00000565666 FLIIQ13045 1269 aa23.95■■□□□ 1.42
CMTM3-210ENST00000565666 TRIM28Q13263 835 aaKnown RBP23.95■■□□□ 1.42
CMTM3-210ENST00000565666 SOGA3Q5TF21 947 aa23.95■■□□□ 1.42
CMTM3-210ENST00000565666 SYNE4Q8N205 404 aa23.95■■□□□ 1.42
CMTM3-210ENST00000565666 PI4KAP1Q8N8J0 262 aa23.95■■□□□ 1.42
CMTM3-210ENST00000565666 RBM17Q96I25 401 aaKnown RBP23.95■■□□□ 1.42
CMTM3-210ENST00000565666 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
CMTM3-210ENST00000565666 SBF1O95248 1867 aa23.94■■□□□ 1.42
CMTM3-210ENST00000565666 NEXNQ0ZGT2 675 aa23.94■■□□□ 1.42
CMTM3-210ENST00000565666 C3orf67Q6ZVT6 689 aa23.94■■□□□ 1.42
CMTM3-210ENST00000565666 FAM89AQ96GI7 184 aa23.94■■□□□ 1.42
CMTM3-210ENST00000565666 SLFN5Q08AF3 891 aa23.93■■□□□ 1.42
CMTM3-210ENST00000565666 FKBP5Q13451 457 aaPredicted RBP23.93■■□□□ 1.42
CMTM3-210ENST00000565666 RTL5Q5HYW3 569 aaPredicted RBP23.93■■□□□ 1.42
CMTM3-210ENST00000565666 FER1L6Q2WGJ9 1857 aa23.93■■□□□ 1.42
CMTM3-210ENST00000565666 DDX60Q8IY21 1712 aaKnown RBP23.93■■□□□ 1.42
CMTM3-210ENST00000565666 HOXA10P31260 410 aaPredicted RBP23.92■■□□□ 1.42
CMTM3-210ENST00000565666 CCDC191Q8NCU4 936 aa23.92■■□□□ 1.42
CMTM3-210ENST00000565666 ZNF526Q8TF50 670 aaPredicted RBP23.92■■□□□ 1.42
CMTM3-210ENST00000565666 CCDC88AQ3V6T2 1871 aa23.92■■□□□ 1.42
CMTM3-210ENST00000565666 NFKBIEO00221 500 aa23.91■■□□□ 1.42
CMTM3-210ENST00000565666 LMNB1P20700 586 aa23.91■■□□□ 1.42
CMTM3-210ENST00000565666 CCDC93Q567U6 631 aa23.91■■□□□ 1.42
CMTM3-210ENST00000565666 CDCA7LQ96GN5 454 aa23.91■■□□□ 1.42
CMTM3-210ENST00000565666 CRAMP1Q96RY5 1269 aa23.91■■□□□ 1.42
CMTM3-210ENST00000565666 CWC25Q9NXE8 425 aaPredicted RBP23.91■■□□□ 1.42
CMTM3-210ENST00000565666 TAOK3Q9H2K8 898 aa23.9■■□□□ 1.42
CMTM3-210ENST00000565666 ZBTB38Q8NAP3 1195 aaPredicted RBP23.89■■□□□ 1.41
CMTM3-210ENST00000565666 C7orf43Q8WVR3 580 aa23.89■■□□□ 1.41
CMTM3-210ENST00000565666 IRS4O14654 1257 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-210ENST00000565666 GPBP1L1Q9HC44 474 aaPredicted RBP23.88■■□□□ 1.41
CMTM3-210ENST00000565666 TIAM2Q8IVF5 1701 aa23.87■■□□□ 1.41
CMTM3-210ENST00000565666 PPEF1O14829 653 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-210ENST00000565666 PCCAP05165 728 aaPredicted RBP23.87■■□□□ 1.41
CMTM3-210ENST00000565666 HSP90B1P14625 803 aaKnown RBP23.87■■□□□ 1.41
CMTM3-210ENST00000565666 OLFM4Q6UX06 510 aa23.87■■□□□ 1.41
CMTM3-210ENST00000565666 DDX46Q7L014 1031 aaKnown RBP23.87■■□□□ 1.41
CMTM3-210ENST00000565666 DNAAF4Q8WXU2 420 aa23.87■■□□□ 1.41
CMTM3-210ENST00000565666 ABCC4O15439 1325 aa23.86■■□□□ 1.41
CMTM3-210ENST00000565666 LTBP3Q9NS15 1303 aa23.86■■□□□ 1.41
CMTM3-210ENST00000565666 IGKV5-2P06315 115 aa23.86■■□□□ 1.41
CMTM3-210ENST00000565666 CWF19L2Q2TBE0 894 aaKnown RBP23.86■■□□□ 1.41
CMTM3-210ENST00000565666 RTKN2Q8IZC4 609 aa23.86■■□□□ 1.41
CMTM3-210ENST00000565666 TMX4Q9H1E5 349 aaPredicted RBP23.86■■□□□ 1.41
CMTM3-210ENST00000565666 PRELPP51888 382 aa23.85■■□□□ 1.41
CMTM3-210ENST00000565666 JARID2Q92833 1246 aaPredicted RBP23.85■■□□□ 1.41
CMTM3-210ENST00000565666 NEURL1BA8MQ27 555 aa23.84■■□□□ 1.41
CMTM3-210ENST00000565666 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
CMTM3-210ENST00000565666 FKBP4Q02790 459 aaKnown RBP eCLIP23.84■■□□□ 1.41
CMTM3-210ENST00000565666 CC2D2BQ6DHV5 1058 aa23.84■■□□□ 1.41
CMTM3-210ENST00000565666 DICER1Q9UPY3 1922 aaKnown RBP23.83■■□□□ 1.41
CMTM3-210ENST00000565666 SF3B3Q15393 1217 aaKnown RBP23.83■■□□□ 1.41
CMTM3-210ENST00000565666 TRMT2AQ8IZ69 625 aaKnown RBP23.83■■□□□ 1.41
CMTM3-210ENST00000565666 F6X3S4 739 aa23.82■■□□□ 1.4
CMTM3-210ENST00000565666 GRAPQ13588 217 aa23.82■■□□□ 1.4
CMTM3-210ENST00000565666 GRAPLQ8TC17 118 aaPredicted RBP23.82■■□□□ 1.4
CMTM3-210ENST00000565666 ZC3H4Q9UPT8 1303 aaKnown RBP23.82■■□□□ 1.4
CMTM3-210ENST00000565666 TAF1P21675 1872 aa23.81■■□□□ 1.4
CMTM3-210ENST00000565666 PDE8AO60658 829 aa23.81■■□□□ 1.4
CMTM3-210ENST00000565666 BBOX1O75936 387 aa23.81■■□□□ 1.4
CMTM3-210ENST00000565666 LINS1Q8NG48 757 aa23.81■■□□□ 1.4
CMTM3-210ENST00000565666 CDHR2Q9BYE9 1310 aa23.81■■□□□ 1.4
CMTM3-210ENST00000565666 GRIPAP1Q4V328 841 aa23.8■■□□□ 1.4
CMTM3-210ENST00000565666 ATP6V0A2Q9Y487 856 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms